RNA–Protein interactions for RNA: ENST00000377139.7

IRF3-203, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-203ENST00000377139 NISCHQ9Y2I1 1504 aa41.54■■■■■ 4.24
IRF3-203ENST00000377139 CCDC180Q9P1Z9 1646 aa36.41■■■■□ 3.42
IRF3-203ENST00000377139 ZCCHC6Q5VYS8 1495 aaKnown RBP34.88■■■■□ 3.17
IRF3-203ENST00000377139 DCAF1Q9Y4B6 1507 aa34.43■■■■□ 3.1
IRF3-203ENST00000377139 ABCC9O60706 1549 aa34.41■■■■□ 3.1
IRF3-203ENST00000377139 DCAF8L2P0C7V8 631 aa34.22■■■■□ 3.07
IRF3-203ENST00000377139 MYO15BQ96JP2 1530 aa34.12■■■■□ 3.05
IRF3-203ENST00000377139 NACADO15069 1562 aa33.92■■■■□ 3.02
IRF3-203ENST00000377139 RB1CC1Q8TDY2 1594 aa33.66■■■□□ 2.98
IRF3-203ENST00000377139 SHROOM4Q9ULL8 1493 aa33.62■■■□□ 2.97
IRF3-203ENST00000377139 SCRIBQ14160 1630 aa33.33■■■□□ 2.93
IRF3-203ENST00000377139 UNC13AQ9UPW8 1703 aa32.93■■■□□ 2.86
IRF3-203ENST00000377139 BICRAQ9NZM4 1560 aa32.58■■■□□ 2.81
IRF3-203ENST00000377139 PABPN1Q86U42 306 aaKnown RBP eCLIP32.35■■■□□ 2.772e-7■■■■□ 22.6
IRF3-203ENST00000377139 SUPT5HO00267 1087 aaKnown RBP32.27■■■□□ 2.76
IRF3-203ENST00000377139 CECR2Q9BXF3 1484 aa32.22■■■□□ 2.75
IRF3-203ENST00000377139 BAZ1AQ9NRL2 1556 aaPredicted RBP32.14■■■□□ 2.74
IRF3-203ENST00000377139 RSF1Q96T23 1441 aaPredicted RBP32.12■■■□□ 2.73
IRF3-203ENST00000377139 MROH2BQ7Z745 1585 aa32.04■■■□□ 2.72
IRF3-203ENST00000377139 SMARCA4P51532 1647 aa31.99■■■□□ 2.71
IRF3-203ENST00000377139 WIZO95785 1651 aa31.79■■■□□ 2.68
IRF3-203ENST00000377139 PEG3Q9GZU2 1588 aa31.65■■■□□ 2.66
IRF3-203ENST00000377139 EIF4G1Q04637 1599 aaKnown RBP31.64■■■□□ 2.66
IRF3-203ENST00000377139 SMARCA2P51531 1590 aa31.52■■■□□ 2.64
IRF3-203ENST00000377139 TOP2AP11388 1531 aaKnown RBP31.51■■■□□ 2.63
IRF3-203ENST00000377139 ATAD2BQ9ULI0 1458 aa31.48■■■□□ 2.63
IRF3-203ENST00000377139 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
IRF3-203ENST00000377139 NCAPD3P42695 1498 aa31.26■■■□□ 2.59
IRF3-203ENST00000377139 HMGXB3Q12766 1538 aa31.25■■■□□ 2.59
IRF3-203ENST00000377139 CC2D2AQ9P2K1 1620 aa31.19■■■□□ 2.58
IRF3-203ENST00000377139 CCDC88BA6NC98 1476 aa31.12■■■□□ 2.57
IRF3-203ENST00000377139 CHIC1Q5VXU3 224 aa30.84■■■□□ 2.53
IRF3-203ENST00000377139 CFTRP13569 1480 aa30.51■■■□□ 2.48
IRF3-203ENST00000377139 PRDM2Q13029 1718 aa30.44■■■□□ 2.46
IRF3-203ENST00000377139 CADPSQ9ULU8 1353 aa30.43■■■□□ 2.46
IRF3-203ENST00000377139 TRIM41Q8WV44 630 aa30.42■■■□□ 2.46
IRF3-203ENST00000377139 DNAJC5BQ9UF47 199 aa30.39■■■□□ 2.46
IRF3-203ENST00000377139 ABCC8Q09428 1581 aa30.39■■■□□ 2.45
IRF3-203ENST00000377139 WRNQ14191 1432 aaPredicted RBP eCLIP30.28■■■□□ 2.44
IRF3-203ENST00000377139 LAMC3Q9Y6N6 1575 aa30.28■■■□□ 2.44
IRF3-203ENST00000377139 NESP48681 1621 aa30.14■■■□□ 2.42
IRF3-203ENST00000377139 SYNJ1O43426 1573 aa30.13■■■□□ 2.41
IRF3-203ENST00000377139 FANCD2Q9BXW9 1451 aa30.09■■■□□ 2.41
IRF3-203ENST00000377139 TOP2BQ02880 1626 aa30.08■■■□□ 2.41
IRF3-203ENST00000377139 BIVM-ERCC5R4GMW8 1640 aa30.07■■■□□ 2.4
IRF3-203ENST00000377139 PDS5BQ9NTI5 1447 aa30.02■■■□□ 2.4
IRF3-203ENST00000377139 CUX1P39880 1505 aa29.99■■■□□ 2.39
IRF3-203ENST00000377139 CEP164Q9UPV0 1460 aa29.95■■■□□ 2.39
IRF3-203ENST00000377139 KIF21AQ7Z4S6 1674 aa29.86■■■□□ 2.37
IRF3-203ENST00000377139 DNMBPQ6XZF7 1577 aa29.83■■■□□ 2.37
IRF3-203ENST00000377139 EEA1Q15075 1411 aa29.83■■■□□ 2.37
IRF3-203ENST00000377139 FAM9AQ8IZU1 332 aaPredicted RBP29.77■■■□□ 2.36
IRF3-203ENST00000377139 SOGA1O94964 1423 aa29.77■■■□□ 2.36
IRF3-203ENST00000377139 TOPBP1Q92547 1522 aa29.75■■■□□ 2.35
IRF3-203ENST00000377139 URB2Q14146 1524 aaKnown RBP29.7■■■□□ 2.35
IRF3-203ENST00000377139 FGD5Q6ZNL6 1462 aa29.7■■■□□ 2.34
IRF3-203ENST00000377139 RUSC2Q8N2Y8 1516 aa29.64■■■□□ 2.34
IRF3-203ENST00000377139 MRC2Q9UBG0 1479 aa29.63■■■□□ 2.33
IRF3-203ENST00000377139 POLA1P09884 1462 aaPredicted RBP29.58■■■□□ 2.33
IRF3-203ENST00000377139 ERCC6Q03468 1493 aa29.58■■■□□ 2.33
IRF3-203ENST00000377139 LOC105371045A0A1W2PR82 267 aa29.57■■■□□ 2.32
IRF3-203ENST00000377139 CSRNP3Q8WYN3 585 aa29.56■■■□□ 2.32
IRF3-203ENST00000377139 KIF27Q86VH2 1401 aa29.54■■■□□ 2.32
IRF3-203ENST00000377139 WDR62O43379 1518 aa29.49■■■□□ 2.31
IRF3-203ENST00000377139 CUX2O14529 1486 aa29.47■■■□□ 2.31
IRF3-203ENST00000377139 ABCA10Q8WWZ4 1543 aa29.47■■■□□ 2.31
IRF3-203ENST00000377139 RAD54L2Q9Y4B4 1467 aa29.43■■■□□ 2.3
IRF3-203ENST00000377139 THOC2Q8NI27 1593 aaKnown RBP29.43■■■□□ 2.3
IRF3-203ENST00000377139 KIF21BO75037 1637 aa29.42■■■□□ 2.3
IRF3-203ENST00000377139 WDR97A6NE52 1622 aa29.41■■■□□ 2.3
IRF3-203ENST00000377139 GOLGA3Q08378 1498 aa29.36■■■□□ 2.29
IRF3-203ENST00000377139 TARBP1Q13395 1621 aaKnown RBP29.33■■■□□ 2.29
IRF3-203ENST00000377139 EHMT2Q96KQ7 1210 aa29.29■■■□□ 2.28
IRF3-203ENST00000377139 PRXQ9BXM0 1461 aa29.28■■■□□ 2.28
IRF3-203ENST00000377139 ERICH3Q5RHP9 1530 aa29.27■■■□□ 2.28
IRF3-203ENST00000377139 IFT140Q96RY7 1462 aa29.25■■■□□ 2.27
IRF3-203ENST00000377139 ABCA5Q8WWZ7 1642 aa29.25■■■□□ 2.27
IRF3-203ENST00000377139 IGF1RP08069 1367 aa29.23■■■□□ 2.27
IRF3-203ENST00000377139 TNIKQ9UKE5 1360 aa29.21■■■□□ 2.27
IRF3-203ENST00000377139 RAPGEF2Q9Y4G8 1499 aa29.2■■■□□ 2.26
IRF3-203ENST00000377139 GAPVD1Q14C86 1478 aa29.17■■■□□ 2.26
IRF3-203ENST00000377139 UBTFP17480 764 aaKnown RBP29.16■■■□□ 2.26
IRF3-203ENST00000377139 TDRD9Q8NDG6 1382 aaKnown RBP29.15■■■□□ 2.26
IRF3-203ENST00000377139 CUL7Q14999 1698 aa29.15■■■□□ 2.26
IRF3-203ENST00000377139 CARMIL1Q5VZK9 1371 aa29.11■■■□□ 2.25
IRF3-203ENST00000377139 PBRM1Q86U86 1689 aa29.06■■■□□ 2.24
IRF3-203ENST00000377139 CEP162Q5TB80 1403 aa29.01■■■□□ 2.24
IRF3-203ENST00000377139 ZNF608Q9ULD9 1512 aaPredicted RBP29■■■□□ 2.23
IRF3-203ENST00000377139 AQRO60306 1485 aaKnown RBP eCLIP29■■■□□ 2.232e-7■■■■■ 27
IRF3-203ENST00000377139 GRIN2BQ13224 1484 aa28.99■■■□□ 2.23
IRF3-203ENST00000377139 EIF4G3O43432 1585 aaKnown RBP28.98■■■□□ 2.23
IRF3-203ENST00000377139 ADAMTS12P58397 1594 aa28.88■■■□□ 2.21
IRF3-203ENST00000377139 FHAD1B1AJZ9 1412 aa28.87■■■□□ 2.21
IRF3-203ENST00000377139 CLIP1P30622 1438 aa28.85■■■□□ 2.21
IRF3-203ENST00000377139 MAGI1Q96QZ7 1491 aaPredicted RBP28.79■■■□□ 2.2
IRF3-203ENST00000377139 CTTNBP2Q8WZ74 1663 aa28.79■■■□□ 2.2
IRF3-203ENST00000377139 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
IRF3-203ENST00000377139 SYNJ2O15056 1496 aa28.66■■■□□ 2.18
IRF3-203ENST00000377139 RANGAP1P46060 587 aaPredicted RBP28.63■■■□□ 2.17
IRF3-203ENST00000377139 GRIN2AQ12879 1464 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms