RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 NISCHQ9Y2I1 1504 aa34.4■■■■□ 3.1
IRF3-225ENST00000600022 ABCC9O60706 1549 aa31.16■■■□□ 2.58
IRF3-225ENST00000600022 CCDC180Q9P1Z9 1646 aa30.76■■■□□ 2.52
IRF3-225ENST00000600022 DNAJC5BQ9UF47 199 aa29.53■■■□□ 2.32
IRF3-225ENST00000600022 RB1CC1Q8TDY2 1594 aa29.42■■■□□ 2.3
IRF3-225ENST00000600022 DCAF8L2P0C7V8 631 aa29.29■■■□□ 2.28
IRF3-225ENST00000600022 NACADO15069 1562 aa29.18■■■□□ 2.26
IRF3-225ENST00000600022 PABPN1Q86U42 306 aaKnown RBP eCLIP29.1■■■□□ 2.252e-7■■■■□ 22.6
IRF3-225ENST00000600022 UNC13AQ9UPW8 1703 aa28.81■■■□□ 2.2
IRF3-225ENST00000600022 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.18
IRF3-225ENST00000600022 MYO15BQ96JP2 1530 aa28.69■■■□□ 2.18
IRF3-225ENST00000600022 ZCCHC6Q5VYS8 1495 aaKnown RBP28.45■■■□□ 2.14
IRF3-225ENST00000600022 DCAF1Q9Y4B6 1507 aa28.3■■■□□ 2.12
IRF3-225ENST00000600022 SCRIBQ14160 1630 aa28.2■■■□□ 2.1
IRF3-225ENST00000600022 CC2D2AQ9P2K1 1620 aa28.07■■■□□ 2.08
IRF3-225ENST00000600022 SHROOM4Q9ULL8 1493 aa28.05■■■□□ 2.08
IRF3-225ENST00000600022 CECR2Q9BXF3 1484 aa28.02■■■□□ 2.08
IRF3-225ENST00000600022 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
IRF3-225ENST00000600022 DNAJC5Q9H3Z4 198 aa27.06■■□□□ 1.92
IRF3-225ENST00000600022 NCAPD3P42695 1498 aa27.02■■□□□ 1.92
IRF3-225ENST00000600022 ATAD2BQ9ULI0 1458 aa26.95■■□□□ 1.91
IRF3-225ENST00000600022 SMARCA4P51532 1647 aa26.83■■□□□ 1.89
IRF3-225ENST00000600022 ERCC6Q03468 1493 aa26.81■■□□□ 1.88
IRF3-225ENST00000600022 NESP48681 1621 aa26.76■■□□□ 1.87
IRF3-225ENST00000600022 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
IRF3-225ENST00000600022 CUX2O14529 1486 aa26.74■■□□□ 1.87
IRF3-225ENST00000600022 HMGXB3Q12766 1538 aa26.72■■□□□ 1.87
IRF3-225ENST00000600022 BAZ1AQ9NRL2 1556 aaPredicted RBP26.64■■□□□ 1.86
IRF3-225ENST00000600022 BAZ1BQ9UIG0 1483 aaKnown RBP26.63■■□□□ 1.85
IRF3-225ENST00000600022 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
IRF3-225ENST00000600022 PEG3Q9GZU2 1588 aa26.53■■□□□ 1.84
IRF3-225ENST00000600022 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
IRF3-225ENST00000600022 LAMC3Q9Y6N6 1575 aa26.35■■□□□ 1.81
IRF3-225ENST00000600022 KIF21AQ7Z4S6 1674 aa26.28■■□□□ 1.8
IRF3-225ENST00000600022 PDS5BQ9NTI5 1447 aa26.25■■□□□ 1.79
IRF3-225ENST00000600022 WIZO95785 1651 aa26.24■■□□□ 1.79
IRF3-225ENST00000600022 CADPSQ9ULU8 1353 aa26.22■■□□□ 1.79
IRF3-225ENST00000600022 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
IRF3-225ENST00000600022 RSF1Q96T23 1441 aaPredicted RBP25.98■■□□□ 1.75
IRF3-225ENST00000600022 WDR62O43379 1518 aa25.97■■□□□ 1.75
IRF3-225ENST00000600022 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
IRF3-225ENST00000600022 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
IRF3-225ENST00000600022 TRIM41Q8WV44 630 aa25.88■■□□□ 1.73
IRF3-225ENST00000600022 CFTRP13569 1480 aa25.87■■□□□ 1.73
IRF3-225ENST00000600022 TOP2AP11388 1531 aaKnown RBP25.8■■□□□ 1.72
IRF3-225ENST00000600022 URB2Q14146 1524 aaKnown RBP25.75■■□□□ 1.71
IRF3-225ENST00000600022 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
IRF3-225ENST00000600022 CCDC88BA6NC98 1476 aa25.63■■□□□ 1.69
IRF3-225ENST00000600022 ZNF608Q9ULD9 1512 aaPredicted RBP25.5■■□□□ 1.67
IRF3-225ENST00000600022 PRDM2Q13029 1718 aa25.43■■□□□ 1.66
IRF3-225ENST00000600022 TOPBP1Q92547 1522 aa25.41■■□□□ 1.66
IRF3-225ENST00000600022 IFT140Q96RY7 1462 aa25.39■■□□□ 1.65
IRF3-225ENST00000600022 AQRO60306 1485 aaKnown RBP eCLIP25.27■■□□□ 1.642e-7■■■■■ 27
IRF3-225ENST00000600022 RIMBP3CA6NJZ7 1639 aa25.26■■□□□ 1.63
IRF3-225ENST00000600022 RIMBP3BA6NNM3 1639 aa25.26■■□□□ 1.63
IRF3-225ENST00000600022 RIMBP3Q9UFD9 1639 aa25.26■■□□□ 1.63
IRF3-225ENST00000600022 DNMBPQ6XZF7 1577 aa25.24■■□□□ 1.63
IRF3-225ENST00000600022 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
IRF3-225ENST00000600022 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
IRF3-225ENST00000600022 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
IRF3-225ENST00000600022 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
IRF3-225ENST00000600022 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
IRF3-225ENST00000600022 RAD54L2Q9Y4B4 1467 aa25.15■■□□□ 1.62
IRF3-225ENST00000600022 FBLN2P98095 1184 aa25.14■■□□□ 1.62
IRF3-225ENST00000600022 CYB5RLQ6IPT4 315 aa25.13■■□□□ 1.61
IRF3-225ENST00000600022 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
IRF3-225ENST00000600022 SOGA1O94964 1423 aa25.06■■□□□ 1.6
IRF3-225ENST00000600022 CHD1O14646 1710 aa25.06■■□□□ 1.6
IRF3-225ENST00000600022 FGD5Q6ZNL6 1462 aa24.97■■□□□ 1.59
IRF3-225ENST00000600022 CUX1P39880 1505 aa24.96■■□□□ 1.59
IRF3-225ENST00000600022 ARAP1Q96P48 1450 aa24.95■■□□□ 1.58
IRF3-225ENST00000600022 SNAPC4Q5SXM2 1469 aa24.91■■□□□ 1.58
IRF3-225ENST00000600022 CHMP7Q8WUX9 453 aaPredicted RBP24.87■■□□□ 1.57
IRF3-225ENST00000600022 TRHP20396 242 aaPredicted RBP24.86■■□□□ 1.57
IRF3-225ENST00000600022 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
IRF3-225ENST00000600022 GRIN2BQ13224 1484 aa24.79■■□□□ 1.56
IRF3-225ENST00000600022 CLASP1Q7Z460 1538 aa24.78■■□□□ 1.56
IRF3-225ENST00000600022 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
IRF3-225ENST00000600022 WDR97A6NE52 1622 aa24.73■■□□□ 1.55
IRF3-225ENST00000600022 SYNJ2O15056 1496 aa24.72■■□□□ 1.55
IRF3-225ENST00000600022 GAPVD1Q14C86 1478 aa24.71■■□□□ 1.55
IRF3-225ENST00000600022 SYNJ1O43426 1573 aa24.69■■□□□ 1.54
IRF3-225ENST00000600022 ABCA10Q8WWZ4 1543 aa24.64■■□□□ 1.53
IRF3-225ENST00000600022 PBRM1Q86U86 1689 aa24.63■■□□□ 1.53
IRF3-225ENST00000600022 ABCA5Q8WWZ7 1642 aa24.6■■□□□ 1.53
IRF3-225ENST00000600022 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
IRF3-225ENST00000600022 ERCC6L2Q5T890 1561 aa24.52■■□□□ 1.52
IRF3-225ENST00000600022 GRIN2AQ12879 1464 aa24.49■■□□□ 1.51
IRF3-225ENST00000600022 TOP2BQ02880 1626 aa24.43■■□□□ 1.5
IRF3-225ENST00000600022 CEP170Q5SW79 1584 aa24.43■■□□□ 1.5
IRF3-225ENST00000600022 BIVM-ERCC5R4GMW8 1640 aa24.42■■□□□ 1.5
IRF3-225ENST00000600022 ADAMTS12P58397 1594 aa24.42■■□□□ 1.5
IRF3-225ENST00000600022 NUP160Q12769 1436 aa24.41■■□□□ 1.5
IRF3-225ENST00000600022 FHAD1B1AJZ9 1412 aa24.37■■□□□ 1.49
IRF3-225ENST00000600022 ERICH3Q5RHP9 1530 aa24.29■■□□□ 1.48
IRF3-225ENST00000600022 SHROOM2Q13796 1616 aa24.28■■□□□ 1.48
IRF3-225ENST00000600022 JPH4Q96JJ6 628 aa24.25■■□□□ 1.47
IRF3-225ENST00000600022 PRG4Q92954 1404 aaPredicted RBP24.24■■□□□ 1.47
IRF3-225ENST00000600022 AEBP2Q6ZN18 517 aaPredicted RBP24.16■■□□□ 1.46
IRF3-225ENST00000600022 IGF1RP08069 1367 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms