RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 NISCHQ9Y2I1 1504 aa43.76■■■■■ 4.6
IRF3-202ENST00000377135 CCDC180Q9P1Z9 1646 aa38.95■■■■□ 3.83
IRF3-202ENST00000377135 ABCC9O60706 1549 aa38.75■■■■□ 3.79
IRF3-202ENST00000377135 DCAF8L2P0C7V8 631 aa37.06■■■■□ 3.52
IRF3-202ENST00000377135 RB1CC1Q8TDY2 1594 aa36.98■■■■□ 3.51
IRF3-202ENST00000377135 NACADO15069 1562 aa36.84■■■■□ 3.49
IRF3-202ENST00000377135 MYO15BQ96JP2 1530 aa36.44■■■■□ 3.42
IRF3-202ENST00000377135 ZCCHC6Q5VYS8 1495 aaKnown RBP36.29■■■■□ 3.4
IRF3-202ENST00000377135 PABPN1Q86U42 306 aaKnown RBP eCLIP36.27■■■■□ 3.42e-7■■■■□ 22.6
IRF3-202ENST00000377135 DCAF1Q9Y4B6 1507 aa36.12■■■■□ 3.37
IRF3-202ENST00000377135 DNAJC5BQ9UF47 199 aa36.1■■■■□ 3.37
IRF3-202ENST00000377135 UNC13AQ9UPW8 1703 aa36.04■■■■□ 3.36
IRF3-202ENST00000377135 BICRAQ9NZM4 1560 aa35.86■■■■□ 3.33
IRF3-202ENST00000377135 SCRIBQ14160 1630 aa35.6■■■■□ 3.29
IRF3-202ENST00000377135 SHROOM4Q9ULL8 1493 aa35.38■■■■□ 3.25
IRF3-202ENST00000377135 EIF4G1Q04637 1599 aaKnown RBP34.96■■■■□ 3.19
IRF3-202ENST00000377135 CC2D2AQ9P2K1 1620 aa34.95■■■■□ 3.18
IRF3-202ENST00000377135 CECR2Q9BXF3 1484 aa34.86■■■■□ 3.17
IRF3-202ENST00000377135 NCAPD3P42695 1498 aa34.07■■■■□ 3.04
IRF3-202ENST00000377135 ATAD2BQ9ULI0 1458 aa34■■■■□ 3.03
IRF3-202ENST00000377135 SMARCA4P51532 1647 aa33.99■■■■□ 3.03
IRF3-202ENST00000377135 BAZ1AQ9NRL2 1556 aaPredicted RBP33.91■■■■□ 3.02
IRF3-202ENST00000377135 SMARCA2P51531 1590 aa33.89■■■■□ 3.02
IRF3-202ENST00000377135 MROH2BQ7Z745 1585 aa33.73■■■□□ 2.99
IRF3-202ENST00000377135 HMGXB3Q12766 1538 aa33.73■■■□□ 2.99
IRF3-202ENST00000377135 BAZ1BQ9UIG0 1483 aaKnown RBP33.68■■■□□ 2.98
IRF3-202ENST00000377135 PEG3Q9GZU2 1588 aa33.64■■■□□ 2.98
IRF3-202ENST00000377135 ERCC6Q03468 1493 aa33.43■■■□□ 2.94
IRF3-202ENST00000377135 NESP48681 1621 aa33.38■■■□□ 2.93
IRF3-202ENST00000377135 WIZO95785 1651 aa33.31■■■□□ 2.92
IRF3-202ENST00000377135 RSF1Q96T23 1441 aaPredicted RBP33.23■■■□□ 2.91
IRF3-202ENST00000377135 CUX2O14529 1486 aa33.16■■■□□ 2.9
IRF3-202ENST00000377135 LAMC3Q9Y6N6 1575 aa33.15■■■□□ 2.9
IRF3-202ENST00000377135 CADPSQ9ULU8 1353 aa33.1■■■□□ 2.89
IRF3-202ENST00000377135 PDS5BQ9NTI5 1447 aa33.06■■■□□ 2.88
IRF3-202ENST00000377135 TOP2AP11388 1531 aaKnown RBP32.9■■■□□ 2.86
IRF3-202ENST00000377135 DNAJC5Q9H3Z4 198 aa32.87■■■□□ 2.85
IRF3-202ENST00000377135 KIF21AQ7Z4S6 1674 aa32.85■■■□□ 2.85
IRF3-202ENST00000377135 THOC2Q8NI27 1593 aaKnown RBP32.82■■■□□ 2.84
IRF3-202ENST00000377135 CFTRP13569 1480 aa32.74■■■□□ 2.83
IRF3-202ENST00000377135 MRC2Q9UBG0 1479 aa32.68■■■□□ 2.82
IRF3-202ENST00000377135 FANCD2Q9BXW9 1451 aa32.66■■■□□ 2.82
IRF3-202ENST00000377135 CEP164Q9UPV0 1460 aa32.63■■■□□ 2.81
IRF3-202ENST00000377135 CCDC88BA6NC98 1476 aa32.62■■■□□ 2.81
IRF3-202ENST00000377135 WDR62O43379 1518 aa32.53■■■□□ 2.8
IRF3-202ENST00000377135 URB2Q14146 1524 aaKnown RBP32.33■■■□□ 2.77
IRF3-202ENST00000377135 SUPT5HO00267 1087 aaKnown RBP32.25■■■□□ 2.75
IRF3-202ENST00000377135 PRDM2Q13029 1718 aa32.25■■■□□ 2.75
IRF3-202ENST00000377135 ABCC8Q09428 1581 aa32.07■■■□□ 2.72
IRF3-202ENST00000377135 TOPBP1Q92547 1522 aa32.06■■■□□ 2.72
IRF3-202ENST00000377135 IFT140Q96RY7 1462 aa31.99■■■□□ 2.71
IRF3-202ENST00000377135 DNMBPQ6XZF7 1577 aa31.93■■■□□ 2.7
IRF3-202ENST00000377135 OSCARQ8IYS5 282 aa31.93■■■□□ 2.7
IRF3-202ENST00000377135 ZNF608Q9ULD9 1512 aaPredicted RBP31.9■■■□□ 2.7
IRF3-202ENST00000377135 POLA1P09884 1462 aaPredicted RBP31.76■■■□□ 2.68
IRF3-202ENST00000377135 SOGA1O94964 1423 aa31.73■■■□□ 2.67
IRF3-202ENST00000377135 AQRO60306 1485 aaKnown RBP eCLIP31.73■■■□□ 2.672e-7■■■■■ 27
IRF3-202ENST00000377135 TARBP1Q13395 1621 aaKnown RBP31.7■■■□□ 2.66
IRF3-202ENST00000377135 RAD54L2Q9Y4B4 1467 aa31.69■■■□□ 2.66
IRF3-202ENST00000377135 CUX1P39880 1505 aa31.64■■■□□ 2.66
IRF3-202ENST00000377135 EIF4G3O43432 1585 aaKnown RBP31.63■■■□□ 2.65
IRF3-202ENST00000377135 TRIM41Q8WV44 630 aa31.63■■■□□ 2.65
IRF3-202ENST00000377135 TDRD9Q8NDG6 1382 aaKnown RBP31.63■■■□□ 2.65
IRF3-202ENST00000377135 FGD5Q6ZNL6 1462 aa31.63■■■□□ 2.65
IRF3-202ENST00000377135 FBLN2P98095 1184 aa31.57■■■□□ 2.64
IRF3-202ENST00000377135 CHMP7Q8WUX9 453 aaPredicted RBP31.38■■■□□ 2.61
IRF3-202ENST00000377135 WDR97A6NE52 1622 aa31.36■■■□□ 2.61
IRF3-202ENST00000377135 GRIN2BQ13224 1484 aa31.34■■■□□ 2.61
IRF3-202ENST00000377135 WRNQ14191 1432 aaPredicted RBP eCLIP31.33■■■□□ 2.61
IRF3-202ENST00000377135 SNAPC4Q5SXM2 1469 aa31.32■■■□□ 2.6
IRF3-202ENST00000377135 CHD1O14646 1710 aa31.31■■■□□ 2.6
IRF3-202ENST00000377135 GAPVD1Q14C86 1478 aa31.29■■■□□ 2.6
IRF3-202ENST00000377135 ABCA10Q8WWZ4 1543 aa31.28■■■□□ 2.6
IRF3-202ENST00000377135 MAGI1Q96QZ7 1491 aaPredicted RBP31.26■■■□□ 2.59
IRF3-202ENST00000377135 RIMBP3CA6NJZ7 1639 aa31.23■■■□□ 2.59
IRF3-202ENST00000377135 RIMBP3BA6NNM3 1639 aa31.23■■■□□ 2.59
IRF3-202ENST00000377135 RIMBP3Q9UFD9 1639 aa31.23■■■□□ 2.59
IRF3-202ENST00000377135 TOP2BQ02880 1626 aa31.22■■■□□ 2.59
IRF3-202ENST00000377135 ARHGEF11O15085 1522 aa31.21■■■□□ 2.59
IRF3-202ENST00000377135 SYNJ1O43426 1573 aa31.19■■■□□ 2.58
IRF3-202ENST00000377135 CYB5RLQ6IPT4 315 aa31.18■■■□□ 2.58
IRF3-202ENST00000377135 BIVM-ERCC5R4GMW8 1640 aa31.17■■■□□ 2.58
IRF3-202ENST00000377135 SYNJ2O15056 1496 aa31.17■■■□□ 2.58
IRF3-202ENST00000377135 ABCA5Q8WWZ7 1642 aa31.11■■■□□ 2.57
IRF3-202ENST00000377135 PBRM1Q86U86 1689 aa31.09■■■□□ 2.57
IRF3-202ENST00000377135 CLASP1Q7Z460 1538 aa30.99■■■□□ 2.55
IRF3-202ENST00000377135 ARAP1Q96P48 1450 aa30.93■■■□□ 2.54
IRF3-202ENST00000377135 FHAD1B1AJZ9 1412 aa30.92■■■□□ 2.54
IRF3-202ENST00000377135 GRIN2AQ12879 1464 aa30.91■■■□□ 2.54
IRF3-202ENST00000377135 ERICH3Q5RHP9 1530 aa30.88■■■□□ 2.53
IRF3-202ENST00000377135 ADAMTS12P58397 1594 aa30.85■■■□□ 2.53
IRF3-202ENST00000377135 NUP160Q12769 1436 aa30.78■■■□□ 2.52
IRF3-202ENST00000377135 KIF27Q86VH2 1401 aa30.74■■■□□ 2.51
IRF3-202ENST00000377135 CEP170Q5SW79 1584 aa30.73■■■□□ 2.51
IRF3-202ENST00000377135 IGF1RP08069 1367 aa30.73■■■□□ 2.51
IRF3-202ENST00000377135 TRHP20396 242 aaPredicted RBP30.71■■■□□ 2.51
IRF3-202ENST00000377135 JPH4Q96JJ6 628 aa30.65■■■□□ 2.5
IRF3-202ENST00000377135 ERCC6L2Q5T890 1561 aa30.58■■■□□ 2.49
IRF3-202ENST00000377135 PRG4Q92954 1404 aaPredicted RBP30.53■■■□□ 2.48
IRF3-202ENST00000377135 CARMIL1Q5VZK9 1371 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms