RNA–Protein interactions for RNA: ENST00000570705.1

SRRM2-204, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 675 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-204ENST00000570705 NISCHQ9Y2I1 1504 aa36.86■■■■□ 3.49
SRRM2-204ENST00000570705 CCDC180Q9P1Z9 1646 aa32.73■■■□□ 2.83
SRRM2-204ENST00000570705 ABCC9O60706 1549 aa32.2■■■□□ 2.74
SRRM2-204ENST00000570705 DCAF8L2P0C7V8 631 aa31.05■■■□□ 2.56
SRRM2-204ENST00000570705 RB1CC1Q8TDY2 1594 aa30.87■■■□□ 2.53
SRRM2-204ENST00000570705 NACADO15069 1562 aa30.79■■■□□ 2.52
SRRM2-204ENST00000570705 ZCCHC6Q5VYS8 1495 aaKnown RBP30.7■■■□□ 2.51
SRRM2-204ENST00000570705 MYO15BQ96JP2 1530 aa30.5■■■□□ 2.47
SRRM2-204ENST00000570705 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
SRRM2-204ENST00000570705 UNC13AQ9UPW8 1703 aa30.13■■■□□ 2.41
SRRM2-204ENST00000570705 PABPN1Q86U42 306 aaKnown RBP eCLIP30.12■■■□□ 2.41
SRRM2-204ENST00000570705 SCRIBQ14160 1630 aa30.03■■■□□ 2.4
SRRM2-204ENST00000570705 BICRAQ9NZM4 1560 aa29.89■■■□□ 2.38
SRRM2-204ENST00000570705 SHROOM4Q9ULL8 1493 aa29.51■■■□□ 2.31
SRRM2-204ENST00000570705 DNAJC5BQ9UF47 199 aa29.48■■■□□ 2.31
SRRM2-204ENST00000570705 EIF4G1Q04637 1599 aaKnown RBP29.15■■■□□ 2.26
SRRM2-204ENST00000570705 CC2D2AQ9P2K1 1620 aa29.05■■■□□ 2.24
SRRM2-204ENST00000570705 CECR2Q9BXF3 1484 aa28.88■■■□□ 2.21
SRRM2-204ENST00000570705 SMARCA4P51532 1647 aa28.62■■■□□ 2.17
SRRM2-204ENST00000570705 BAZ1AQ9NRL2 1556 aaPredicted RBP28.59■■■□□ 2.17
SRRM2-204ENST00000570705 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
SRRM2-204ENST00000570705 MROH2BQ7Z745 1585 aa28.45■■■□□ 2.15
SRRM2-204ENST00000570705 SMARCA2P51531 1590 aa28.41■■■□□ 2.14
SRRM2-204ENST00000570705 NCAPD3P42695 1498 aa28.39■■■□□ 2.13
SRRM2-204ENST00000570705 BAZ1BQ9UIG0 1483 aaKnown RBP28.28■■■□□ 2.12
SRRM2-204ENST00000570705 HMGXB3Q12766 1538 aa28.27■■■□□ 2.12
SRRM2-204ENST00000570705 PEG3Q9GZU2 1588 aa28.25■■■□□ 2.11
SRRM2-204ENST00000570705 WIZO95785 1651 aa28.17■■■□□ 2.1
SRRM2-204ENST00000570705 RSF1Q96T23 1441 aaPredicted RBP28.1■■■□□ 2.09
SRRM2-204ENST00000570705 TOP2AP11388 1531 aaKnown RBP27.83■■■□□ 2.05
SRRM2-204ENST00000570705 NESP48681 1621 aa27.83■■■□□ 2.05
SRRM2-204ENST00000570705 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
SRRM2-204ENST00000570705 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
SRRM2-204ENST00000570705 CADPSQ9ULU8 1353 aa27.62■■■□□ 2.01
SRRM2-204ENST00000570705 SUPT5HO00267 1087 aaKnown RBP27.59■■■□□ 2.01
SRRM2-204ENST00000570705 PDS5BQ9NTI5 1447 aa27.53■■■□□ 2
SRRM2-204ENST00000570705 CCDC88BA6NC98 1476 aa27.52■■■□□ 2
SRRM2-204ENST00000570705 KIF21AQ7Z4S6 1674 aa27.47■■□□□ 1.99
SRRM2-204ENST00000570705 CFTRP13569 1480 aa27.42■■□□□ 1.98
SRRM2-204ENST00000570705 FANCD2Q9BXW9 1451 aa27.35■■□□□ 1.97
SRRM2-204ENST00000570705 THOC2Q8NI27 1593 aaKnown RBP27.35■■□□□ 1.97
SRRM2-204ENST00000570705 CUX2O14529 1486 aa27.34■■□□□ 1.97
SRRM2-204ENST00000570705 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
SRRM2-204ENST00000570705 MRC2Q9UBG0 1479 aa27.25■■□□□ 1.95
SRRM2-204ENST00000570705 PRDM2Q13029 1718 aa27.21■■□□□ 1.95
SRRM2-204ENST00000570705 WDR62O43379 1518 aa27.12■■□□□ 1.93
SRRM2-204ENST00000570705 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
SRRM2-204ENST00000570705 TOPBP1Q92547 1522 aa26.89■■□□□ 1.89
SRRM2-204ENST00000570705 DNMBPQ6XZF7 1577 aa26.85■■□□□ 1.89
SRRM2-204ENST00000570705 ABCC8Q09428 1581 aa26.84■■□□□ 1.89
SRRM2-204ENST00000570705 IFT140Q96RY7 1462 aa26.71■■□□□ 1.87
SRRM2-204ENST00000570705 CUX1P39880 1505 aa26.69■■□□□ 1.86
SRRM2-204ENST00000570705 POLA1P09884 1462 aaPredicted RBP26.66■■□□□ 1.86
SRRM2-204ENST00000570705 FGD5Q6ZNL6 1462 aa26.63■■□□□ 1.85
SRRM2-204ENST00000570705 ZNF608Q9ULD9 1512 aaPredicted RBP26.63■■□□□ 1.85
SRRM2-204ENST00000570705 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
SRRM2-204ENST00000570705 SOGA1O94964 1423 aa26.58■■□□□ 1.85
SRRM2-204ENST00000570705 TARBP1Q13395 1621 aaKnown RBP26.55■■□□□ 1.84
SRRM2-204ENST00000570705 WRNQ14191 1432 aaPredicted RBP eCLIP26.55■■□□□ 1.84
SRRM2-204ENST00000570705 EIF4G3O43432 1585 aaKnown RBP26.52■■□□□ 1.84
SRRM2-204ENST00000570705 DNAJC5Q9H3Z4 198 aa26.51■■□□□ 1.83
SRRM2-204ENST00000570705 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.832e-17■■■■□ 20.4
SRRM2-204ENST00000570705 SYNJ1O43426 1573 aa26.48■■□□□ 1.83
SRRM2-204ENST00000570705 TDRD9Q8NDG6 1382 aaKnown RBP26.46■■□□□ 1.83
SRRM2-204ENST00000570705 TOP2BQ02880 1626 aa26.43■■□□□ 1.82
SRRM2-204ENST00000570705 BIVM-ERCC5R4GMW8 1640 aa26.43■■□□□ 1.82
SRRM2-204ENST00000570705 WDR97A6NE52 1622 aa26.33■■□□□ 1.81
SRRM2-204ENST00000570705 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
SRRM2-204ENST00000570705 FBLN2P98095 1184 aa26.3■■□□□ 1.8
SRRM2-204ENST00000570705 OSCARQ8IYS5 282 aa26.27■■□□□ 1.8
SRRM2-204ENST00000570705 GAPVD1Q14C86 1478 aa26.26■■□□□ 1.79
SRRM2-204ENST00000570705 SNAPC4Q5SXM2 1469 aa26.26■■□□□ 1.79
SRRM2-204ENST00000570705 GRIN2BQ13224 1484 aa26.25■■□□□ 1.79
SRRM2-204ENST00000570705 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
SRRM2-204ENST00000570705 PBRM1Q86U86 1689 aa26.21■■□□□ 1.79
SRRM2-204ENST00000570705 CHD1O14646 1710 aa26.18■■□□□ 1.78
SRRM2-204ENST00000570705 MAGI1Q96QZ7 1491 aaPredicted RBP26.15■■□□□ 1.78
SRRM2-204ENST00000570705 CHMP7Q8WUX9 453 aaPredicted RBP26.14■■□□□ 1.78
SRRM2-204ENST00000570705 SYNJ2O15056 1496 aa26.07■■□□□ 1.76
SRRM2-204ENST00000570705 TRIM41Q8WV44 630 aa26■■□□□ 1.75
SRRM2-204ENST00000570705 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
SRRM2-204ENST00000570705 ERICH3Q5RHP9 1530 aa25.99■■□□□ 1.75
SRRM2-204ENST00000570705 KIF27Q86VH2 1401 aa25.98■■□□□ 1.75
SRRM2-204ENST00000570705 FHAD1B1AJZ9 1412 aa25.95■■□□□ 1.74
SRRM2-204ENST00000570705 GRIN2AQ12879 1464 aa25.91■■□□□ 1.74
SRRM2-204ENST00000570705 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
SRRM2-204ENST00000570705 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
SRRM2-204ENST00000570705 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
SRRM2-204ENST00000570705 CLASP1Q7Z460 1538 aa25.85■■□□□ 1.73
SRRM2-204ENST00000570705 IGF1RP08069 1367 aa25.84■■□□□ 1.73
SRRM2-204ENST00000570705 ARHGEF11O15085 1522 aa25.83■■□□□ 1.73
SRRM2-204ENST00000570705 CEP170Q5SW79 1584 aa25.79■■□□□ 1.72
SRRM2-204ENST00000570705 RUSC2Q8N2Y8 1516 aa25.78■■□□□ 1.72
SRRM2-204ENST00000570705 CUL7Q14999 1698 aa25.78■■□□□ 1.72
SRRM2-204ENST00000570705 NUP160Q12769 1436 aa25.75■■□□□ 1.71
SRRM2-204ENST00000570705 CARMIL1Q5VZK9 1371 aa25.73■■□□□ 1.71
SRRM2-204ENST00000570705 CYB5RLQ6IPT4 315 aa25.68■■□□□ 1.7
SRRM2-204ENST00000570705 ARAP1Q96P48 1450 aa25.64■■□□□ 1.69
SRRM2-204ENST00000570705 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
SRRM2-204ENST00000570705 FAM9AQ8IZU1 332 aaPredicted RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms