RNA–Protein interactions for RNA: ENST00000394935.7

RPL23A-202, Transcript of ribosomal protein L23a, humanhuman

TSL 3

Gene RPL23A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-202ENST00000394935 NISCHQ9Y2I1 1504 aa23.86■■□□□ 1.41
RPL23A-202ENST00000394935 CCDC180Q9P1Z9 1646 aa21.23■□□□□ 0.99
RPL23A-202ENST00000394935 ABCC9O60706 1549 aa20.93■□□□□ 0.94
RPL23A-202ENST00000394935 RB1CC1Q8TDY2 1594 aa20.09■□□□□ 0.81
RPL23A-202ENST00000394935 DCAF8L2P0C7V8 631 aa20.08■□□□□ 0.81
RPL23A-202ENST00000394935 NACADO15069 1562 aa20.04■□□□□ 0.8
RPL23A-202ENST00000394935 MYO15BQ96JP2 1530 aa19.89■□□□□ 0.77
RPL23A-202ENST00000394935 ZCCHC6Q5VYS8 1495 aaKnown RBP19.83■□□□□ 0.76
RPL23A-202ENST00000394935 DCAF1Q9Y4B6 1507 aa19.75■□□□□ 0.75
RPL23A-202ENST00000394935 PABPN1Q86U42 306 aaKnown RBP eCLIP19.56■□□□□ 0.72
RPL23A-202ENST00000394935 UNC13AQ9UPW8 1703 aa19.5■□□□□ 0.71
RPL23A-202ENST00000394935 BICRAQ9NZM4 1560 aa19.41■□□□□ 0.7
RPL23A-202ENST00000394935 SCRIBQ14160 1630 aa19.35■□□□□ 0.69
RPL23A-202ENST00000394935 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
RPL23A-202ENST00000394935 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
RPL23A-202ENST00000394935 EIF4G1Q04637 1599 aaKnown RBP18.95■□□□□ 0.62
RPL23A-202ENST00000394935 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
RPL23A-202ENST00000394935 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
RPL23A-202ENST00000394935 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
RPL23A-202ENST00000394935 SMARCA4P51532 1647 aa18.51■□□□□ 0.55
RPL23A-202ENST00000394935 NCAPD3P42695 1498 aa18.51■□□□□ 0.55
RPL23A-202ENST00000394935 ATAD2BQ9ULI0 1458 aa18.48■□□□□ 0.55
RPL23A-202ENST00000394935 SMARCA2P51531 1590 aa18.46■□□□□ 0.55
RPL23A-202ENST00000394935 HMGXB3Q12766 1538 aa18.37■□□□□ 0.53
RPL23A-202ENST00000394935 MROH2BQ7Z745 1585 aa18.36■□□□□ 0.53
RPL23A-202ENST00000394935 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
RPL23A-202ENST00000394935 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.52
RPL23A-202ENST00000394935 RSF1Q96T23 1441 aaPredicted RBP18.14■□□□□ 0.49
RPL23A-202ENST00000394935 WIZO95785 1651 aa18.13■□□□□ 0.49
RPL23A-202ENST00000394935 ERCC6Q03468 1493 aa18.08■□□□□ 0.49
RPL23A-202ENST00000394935 NESP48681 1621 aa18.04■□□□□ 0.48
RPL23A-202ENST00000394935 LAMC3Q9Y6N6 1575 aa18.02■□□□□ 0.48
RPL23A-202ENST00000394935 CADPSQ9ULU8 1353 aa17.98■□□□□ 0.47
RPL23A-202ENST00000394935 TOP2AP11388 1531 aaKnown RBP17.97■□□□□ 0.47
RPL23A-202ENST00000394935 PDS5BQ9NTI5 1447 aa17.96■□□□□ 0.47
RPL23A-202ENST00000394935 CUX2O14529 1486 aa17.93■□□□□ 0.46
RPL23A-202ENST00000394935 CFTRP13569 1480 aa17.82■□□□□ 0.44
RPL23A-202ENST00000394935 KIF21AQ7Z4S6 1674 aa17.78■□□□□ 0.44
RPL23A-202ENST00000394935 CCDC88BA6NC98 1476 aa17.77■□□□□ 0.44
RPL23A-202ENST00000394935 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.44
RPL23A-202ENST00000394935 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
RPL23A-202ENST00000394935 CEP164Q9UPV0 1460 aa17.74■□□□□ 0.43
RPL23A-202ENST00000394935 MRC2Q9UBG0 1479 aa17.73■□□□□ 0.43
RPL23A-202ENST00000394935 WDR62O43379 1518 aa17.65■□□□□ 0.42
RPL23A-202ENST00000394935 SUPT5HO00267 1087 aaKnown RBP17.64■□□□□ 0.41
RPL23A-202ENST00000394935 PRDM2Q13029 1718 aa17.58■□□□□ 0.4
RPL23A-202ENST00000394935 DNAJC5Q9H3Z4 198 aa17.56■□□□□ 0.4
RPL23A-202ENST00000394935 URB2Q14146 1524 aaKnown RBP17.53■□□□□ 0.4
RPL23A-202ENST00000394935 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
RPL23A-202ENST00000394935 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
RPL23A-202ENST00000394935 DNMBPQ6XZF7 1577 aa17.39■□□□□ 0.37
RPL23A-202ENST00000394935 IFT140Q96RY7 1462 aa17.38■□□□□ 0.37
RPL23A-202ENST00000394935 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.36
RPL23A-202ENST00000394935 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
RPL23A-202ENST00000394935 SOGA1O94964 1423 aa17.25■□□□□ 0.35
RPL23A-202ENST00000394935 OSCARQ8IYS5 282 aa17.23■□□□□ 0.35
RPL23A-202ENST00000394935 CUX1P39880 1505 aa17.22■□□□□ 0.35
RPL23A-202ENST00000394935 FGD5Q6ZNL6 1462 aa17.22■□□□□ 0.35
RPL23A-202ENST00000394935 TARBP1Q13395 1621 aaKnown RBP17.21■□□□□ 0.35
RPL23A-202ENST00000394935 RAD54L2Q9Y4B4 1467 aa17.2■□□□□ 0.34
RPL23A-202ENST00000394935 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.346e-9■■■■□ 24.4
RPL23A-202ENST00000394935 EIF4G3O43432 1585 aaKnown RBP17.17■□□□□ 0.34
RPL23A-202ENST00000394935 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
RPL23A-202ENST00000394935 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
RPL23A-202ENST00000394935 WDR97A6NE52 1622 aa17.12■□□□□ 0.33
RPL23A-202ENST00000394935 FBLN2P98095 1184 aa17.07■□□□□ 0.32
RPL23A-202ENST00000394935 TOP2BQ02880 1626 aa17.05■□□□□ 0.32
RPL23A-202ENST00000394935 ABCA10Q8WWZ4 1543 aa17.05■□□□□ 0.32
RPL23A-202ENST00000394935 GRIN2BQ13224 1484 aa17.05■□□□□ 0.32
RPL23A-202ENST00000394935 BIVM-ERCC5R4GMW8 1640 aa17.03■□□□□ 0.32
RPL23A-202ENST00000394935 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
RPL23A-202ENST00000394935 SYNJ1O43426 1573 aa17.02■□□□□ 0.31
RPL23A-202ENST00000394935 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
RPL23A-202ENST00000394935 CHMP7Q8WUX9 453 aaPredicted RBP17.01■□□□□ 0.31
RPL23A-202ENST00000394935 MAGI1Q96QZ7 1491 aaPredicted RBP17■□□□□ 0.31
RPL23A-202ENST00000394935 CHD1O14646 1710 aa16.95■□□□□ 0.3
RPL23A-202ENST00000394935 SYNJ2O15056 1496 aa16.94■□□□□ 0.3
RPL23A-202ENST00000394935 ABCA5Q8WWZ7 1642 aa16.94■□□□□ 0.3
RPL23A-202ENST00000394935 TRIM41Q8WV44 630 aa16.93■□□□□ 0.3
RPL23A-202ENST00000394935 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
RPL23A-202ENST00000394935 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
RPL23A-202ENST00000394935 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
RPL23A-202ENST00000394935 FHAD1B1AJZ9 1412 aa16.84■□□□□ 0.29
RPL23A-202ENST00000394935 RIMBP3CA6NJZ7 1639 aa16.84■□□□□ 0.29
RPL23A-202ENST00000394935 RIMBP3BA6NNM3 1639 aa16.84■□□□□ 0.29
RPL23A-202ENST00000394935 RIMBP3Q9UFD9 1639 aa16.84■□□□□ 0.29
RPL23A-202ENST00000394935 CLASP1Q7Z460 1538 aa16.8■□□□□ 0.28
RPL23A-202ENST00000394935 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
RPL23A-202ENST00000394935 KIF27Q86VH2 1401 aa16.8■□□□□ 0.28
RPL23A-202ENST00000394935 ADAMTS12P58397 1594 aa16.8■□□□□ 0.28
RPL23A-202ENST00000394935 CYB5RLQ6IPT4 315 aa16.78■□□□□ 0.28
RPL23A-202ENST00000394935 NUP160Q12769 1436 aa16.74■□□□□ 0.27
RPL23A-202ENST00000394935 IGF1RP08069 1367 aa16.74■□□□□ 0.27
RPL23A-202ENST00000394935 ARAP1Q96P48 1450 aa16.7■□□□□ 0.26
RPL23A-202ENST00000394935 CEP170Q5SW79 1584 aa16.68■□□□□ 0.26
RPL23A-202ENST00000394935 CARMIL1Q5VZK9 1371 aa16.65■□□□□ 0.26
RPL23A-202ENST00000394935 CUL7Q14999 1698 aa16.65■□□□□ 0.26
RPL23A-202ENST00000394935 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
RPL23A-202ENST00000394935 SHROOM2Q13796 1616 aa16.58■□□□□ 0.24
RPL23A-202ENST00000394935 KIAA0586Q9BVV6 1533 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms