RNA–Protein interactions for RNA: ENST00000479815.5

HMGN2-208, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 5

Gene HMGN2, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-208ENST00000479815 AEBP2Q6ZN18 517 aaPredicted RBP24.07■■□□□ 1.44
HMGN2-208ENST00000479815 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
HMGN2-208ENST00000479815 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
HMGN2-208ENST00000479815 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
HMGN2-208ENST00000479815 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
HMGN2-208ENST00000479815 FOXD1Q16676 465 aa19.17■□□□□ 0.66
HMGN2-208ENST00000479815 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
HMGN2-208ENST00000479815 MSH5O43196 834 aa17.96■□□□□ 0.47
HMGN2-208ENST00000479815 CCDC180Q9P1Z9 1646 aa17.91■□□□□ 0.46
HMGN2-208ENST00000479815 POTEDQ86YR6 584 aa17.9■□□□□ 0.46
HMGN2-208ENST00000479815 PIAS4Q8N2W9 510 aaPredicted RBP17.86■□□□□ 0.45
HMGN2-208ENST00000479815 PPP6R1Q9UPN7 881 aa17.79■□□□□ 0.44
HMGN2-208ENST00000479815 ADRA2BP18089 450 aa17.73■□□□□ 0.43
HMGN2-208ENST00000479815 ZCCHC6Q5VYS8 1495 aaKnown RBP17.08■□□□□ 0.32
HMGN2-208ENST00000479815 ABCC9O60706 1549 aa16.94■□□□□ 0.3
HMGN2-208ENST00000479815 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
HMGN2-208ENST00000479815 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
HMGN2-208ENST00000479815 NACADO15069 1562 aa16.72■□□□□ 0.27
HMGN2-208ENST00000479815 RB1CC1Q8TDY2 1594 aa16.58■□□□□ 0.24
HMGN2-208ENST00000479815 DCAF8L2P0C7V8 631 aa16.56■□□□□ 0.24
HMGN2-208ENST00000479815 MAPK8IP2Q13387 824 aaPredicted RBP16.34■□□□□ 0.21
HMGN2-208ENST00000479815 SCRIBQ14160 1630 aa16.28■□□□□ 0.2
HMGN2-208ENST00000479815 DMRT2Q9Y5R5 561 aa16.24■□□□□ 0.19
HMGN2-208ENST00000479815 UNC13AQ9UPW8 1703 aa16.19■□□□□ 0.18
HMGN2-208ENST00000479815 SHROOM4Q9ULL8 1493 aa16.19■□□□□ 0.18
HMGN2-208ENST00000479815 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
HMGN2-208ENST00000479815 BICRAQ9NZM4 1560 aa16.09■□□□□ 0.17
HMGN2-208ENST00000479815 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
HMGN2-208ENST00000479815 CECR2Q9BXF3 1484 aa15.75■□□□□ 0.11
HMGN2-208ENST00000479815 PPP4R3CPQ6ZMV5 832 aa15.74■□□□□ 0.11
HMGN2-208ENST00000479815 BAZ1AQ9NRL2 1556 aaPredicted RBP15.74■□□□□ 0.11
HMGN2-208ENST00000479815 SMARCA4P51532 1647 aa15.68■□□□□ 0.1
HMGN2-208ENST00000479815 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
HMGN2-208ENST00000479815 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
HMGN2-208ENST00000479815 DCAF8L1A6NGE4 600 aa15.6■□□□□ 0.09
HMGN2-208ENST00000479815 EIF4G1Q04637 1599 aaKnown RBP15.6■□□□□ 0.09
HMGN2-208ENST00000479815 PEG3Q9GZU2 1588 aa15.58■□□□□ 0.09
HMGN2-208ENST00000479815 HOXD11P31277 338 aaPredicted RBP15.56■□□□□ 0.08
HMGN2-208ENST00000479815 CACNB1Q02641 598 aaPredicted RBP15.55■□□□□ 0.08
HMGN2-208ENST00000479815 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
HMGN2-208ENST00000479815 WIZO95785 1651 aa15.48■□□□□ 0.07
HMGN2-208ENST00000479815 ATAD2BQ9ULI0 1458 aa15.47■□□□□ 0.07
HMGN2-208ENST00000479815 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
HMGN2-208ENST00000479815 SUPT5HO00267 1087 aaKnown RBP15.46■□□□□ 0.07
HMGN2-208ENST00000479815 NCAPD3P42695 1498 aa15.42■□□□□ 0.06
HMGN2-208ENST00000479815 TOP2AP11388 1531 aaKnown RBP15.41■□□□□ 0.06
HMGN2-208ENST00000479815 HMGXB3Q12766 1538 aa15.41■□□□□ 0.06
HMGN2-208ENST00000479815 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
HMGN2-208ENST00000479815 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
HMGN2-208ENST00000479815 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
HMGN2-208ENST00000479815 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
HMGN2-208ENST00000479815 DNAJC5BQ9UF47 199 aa15.31■□□□□ 0.04
HMGN2-208ENST00000479815 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
HMGN2-208ENST00000479815 C1QBPQ07021 282 aaKnown RBP15.07■□□□□ 0
HMGN2-208ENST00000479815 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
HMGN2-208ENST00000479815 CFTRP13569 1480 aa15.01□□□□□ -0.01
HMGN2-208ENST00000479815 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.02
HMGN2-208ENST00000479815 PRDM2Q13029 1718 aa14.92□□□□□ -0.02
HMGN2-208ENST00000479815 LAMC3Q9Y6N6 1575 aa14.91□□□□□ -0.02
HMGN2-208ENST00000479815 NPM3O75607 178 aaKnown RBP14.89□□□□□ -0.03
HMGN2-208ENST00000479815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.83□□□□□ -0.043e-13■■■□□ 16.2
HMGN2-208ENST00000479815 NESP48681 1621 aa14.82□□□□□ -0.04
HMGN2-208ENST00000479815 FANCD2Q9BXW9 1451 aa14.77□□□□□ -0.04
HMGN2-208ENST00000479815 PDS5BQ9NTI5 1447 aa14.77□□□□□ -0.04
HMGN2-208ENST00000479815 WRNQ14191 1432 aaPredicted RBP eCLIP14.74□□□□□ -0.05
HMGN2-208ENST00000479815 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
HMGN2-208ENST00000479815 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.05
HMGN2-208ENST00000479815 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
HMGN2-208ENST00000479815 BIVM-ERCC5R4GMW8 1640 aa14.68□□□□□ -0.06
HMGN2-208ENST00000479815 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
HMGN2-208ENST00000479815 CUX1P39880 1505 aa14.67□□□□□ -0.06
HMGN2-208ENST00000479815 KIF21AQ7Z4S6 1674 aa14.67□□□□□ -0.06
HMGN2-208ENST00000479815 DNMBPQ6XZF7 1577 aa14.64□□□□□ -0.07
HMGN2-208ENST00000479815 TRIM41Q8WV44 630 aa14.62□□□□□ -0.07
HMGN2-208ENST00000479815 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
HMGN2-208ENST00000479815 URB2Q14146 1524 aaKnown RBP14.61□□□□□ -0.07
HMGN2-208ENST00000479815 TOPBP1Q92547 1522 aa14.61□□□□□ -0.07
HMGN2-208ENST00000479815 WDR62O43379 1518 aa14.57□□□□□ -0.08
HMGN2-208ENST00000479815 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
HMGN2-208ENST00000479815 THOC2Q8NI27 1593 aaKnown RBP14.56□□□□□ -0.08
HMGN2-208ENST00000479815 FGD5Q6ZNL6 1462 aa14.53□□□□□ -0.08
HMGN2-208ENST00000479815 U3KPZ7 1027 aaPredicted RBP14.53□□□□□ -0.08
HMGN2-208ENST00000479815 POLA1P09884 1462 aaPredicted RBP14.52□□□□□ -0.08
HMGN2-208ENST00000479815 EEA1Q15075 1411 aa14.49□□□□□ -0.09
HMGN2-208ENST00000479815 ABCA10Q8WWZ4 1543 aa14.46□□□□□ -0.09
HMGN2-208ENST00000479815 KCNA4P22459 653 aa14.46□□□□□ -0.09
HMGN2-208ENST00000479815 CUX2O14529 1486 aa14.44□□□□□ -0.1
HMGN2-208ENST00000479815 WDR97A6NE52 1622 aa14.43□□□□□ -0.1
HMGN2-208ENST00000479815 SOGA1O94964 1423 aa14.42□□□□□ -0.1
HMGN2-208ENST00000479815 TARBP1Q13395 1621 aaKnown RBP14.42□□□□□ -0.1
HMGN2-208ENST00000479815 IFT140Q96RY7 1462 aa14.41□□□□□ -0.1
HMGN2-208ENST00000479815 KIF27Q86VH2 1401 aa14.4□□□□□ -0.1
HMGN2-208ENST00000479815 RAD54L2Q9Y4B4 1467 aa14.39□□□□□ -0.11
HMGN2-208ENST00000479815 SPINK5Q9NQ38 1064 aaPredicted RBP14.39□□□□□ -0.11
HMGN2-208ENST00000479815 ABCA5Q8WWZ7 1642 aa14.36□□□□□ -0.11
HMGN2-208ENST00000479815 RUSC2Q8N2Y8 1516 aa14.36□□□□□ -0.11
HMGN2-208ENST00000479815 CAPN15O75808 1086 aa14.34□□□□□ -0.11
HMGN2-208ENST00000479815 DSG3P32926 999 aa14.3□□□□□ -0.12
HMGN2-208ENST00000479815 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
HMGN2-208ENST00000479815 ERICH3Q5RHP9 1530 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms