Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 UBC-209ENST00000541272 582 ntTSL 512.23□□□□□ -0.451e-20■■□□□ 12.7
SND1Q7KZF4 SLC5A6-213ENST00000461757 2307 ntTSL 220.53■□□□□ 0.881e-6■■□□□ 12.7
SND1Q7KZF4 SGSH-204ENST00000571051 538 ntTSL 415.61■□□□□ 0.093e-8■■□□□ 12.7
SND1Q7KZF4 HSPA8-203ENST00000524552 963 ntTSL 1 (best)12.75□□□□□ -0.371e-33■■□□□ 12.7
SND1Q7KZF4 ABCC1-203ENST00000572053 744 ntTSL 312.04□□□□□ -0.483e-7■■□□□ 12.7
SND1Q7KZF4 GGT1-224ENST00000466310 1249 ntTSL 1 (best)21.08■□□□□ 0.971e-7■■□□□ 12.7
SND1Q7KZF4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.472e-10■■□□□ 12.7
SND1Q7KZF4 F7-206ENST00000541084 2873 ntTSL 2 BASIC13.03□□□□□ -0.322e-10■■□□□ 12.7
SND1Q7KZF4 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.392e-10■■□□□ 12.7
SND1Q7KZF4 ANPEP-208ENST00000560030 896 ntTSL 515.44■□□□□ 0.063e-10■■□□□ 12.7
SND1Q7KZF4 MARS-226ENST00000551892 748 ntTSL 322.22■■□□□ 1.158e-7■■□□□ 12.7
SND1Q7KZF4 MARS-202ENST00000447721 1328 ntTSL 219.4■□□□□ 0.78e-7■■□□□ 12.7
SND1Q7KZF4 APP-214ENST00000466453 374 ntTSL 38.08□□□□□ -1.125e-12■■□□□ 12.7
SND1Q7KZF4 NME3-203ENST00000563367 891 ntTSL 329.22■■■□□ 2.276e-7■■□□□ 12.7
SND1Q7KZF4 NME3-209ENST00000566600 913 ntTSL 227.17■■□□□ 1.946e-7■■□□□ 12.7
SND1Q7KZF4 NME3-208ENST00000565379 911 ntTSL 226.96■■□□□ 1.916e-7■■□□□ 12.7
SND1Q7KZF4 NME3-202ENST00000561637 1014 ntTSL 225.95■■□□□ 1.746e-7■■□□□ 12.7
SND1Q7KZF4 NME3-206ENST00000564252 599 ntTSL 224.61■■□□□ 1.536e-7■■□□□ 12.7
SND1Q7KZF4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.17■■□□□ 1.34e-6■■□□□ 12.7
SND1Q7KZF4 NME3-210ENST00000567271 752 ntTSL 222.41■■□□□ 1.186e-7■■□□□ 12.7
SND1Q7KZF4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.144e-6■■□□□ 12.7
SND1Q7KZF4 SLC35F2-202ENST00000524991 562 ntTSL 422.16■■□□□ 1.144e-6■■□□□ 12.7
SND1Q7KZF4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.134e-6■■□□□ 12.7
SND1Q7KZF4 GART-210ENST00000441403 715 ntTSL 321.87■■□□□ 1.095e-9■■□□□ 12.7
SND1Q7KZF4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.62■■□□□ 1.054e-6■■□□□ 12.7
SND1Q7KZF4 CALM1-207ENST00000553964 2670 ntTSL 1 (best)21.46■■□□□ 1.034e-6■■□□□ 12.7
SND1Q7KZF4 USP39-218ENST00000493829 1660 ntTSL 220.16■□□□□ 0.824e-6■■□□□ 12.7
SND1Q7KZF4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.09■□□□□ 0.814e-6■■□□□ 12.7
SND1Q7KZF4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.754e-6■■□□□ 12.7
SND1Q7KZF4 CDC42-204ENST00000411827 597 ntTSL 319.49■□□□□ 0.715e-6■■□□□ 12.7
SND1Q7KZF4 NME3-207ENST00000564628 811 ntTSL 519.45■□□□□ 0.76e-7■■□□□ 12.7
SND1Q7KZF4 SLC35F2-205ENST00000532513 1028 ntTSL 519.35■□□□□ 0.694e-6■■□□□ 12.7
SND1Q7KZF4 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.33■□□□□ 0.686e-7■■□□□ 12.7
SND1Q7KZF4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.684e-6■■□□□ 12.7
SND1Q7KZF4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.14■□□□□ 0.654e-6■■□□□ 12.7
SND1Q7KZF4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.85■□□□□ 0.614e-6■■□□□ 12.7
SND1Q7KZF4 CALM1-206ENST00000553630 1420 ntTSL 518.76■□□□□ 0.594e-6■■□□□ 12.7
SND1Q7KZF4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.594e-6■■□□□ 12.7
SND1Q7KZF4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.34■□□□□ 0.534e-6■■□□□ 12.7
SND1Q7KZF4 NME3-205ENST00000563854 583 ntTSL 518.22■□□□□ 0.516e-7■■□□□ 12.7
SND1Q7KZF4 CALM1-208ENST00000553995 583 ntTSL 217.83■□□□□ 0.444e-6■■□□□ 12.7
SND1Q7KZF4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.83■□□□□ 0.444e-6■■□□□ 12.7
SND1Q7KZF4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.394e-6■■□□□ 12.7
SND1Q7KZF4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.374e-6■■□□□ 12.7
SND1Q7KZF4 FERMT3-207ENST00000544997 1006 ntTSL 317.12■□□□□ 0.334e-6■■□□□ 12.7
SND1Q7KZF4 SLC35F2-206ENST00000533664 1007 ntTSL 217.1■□□□□ 0.334e-6■■□□□ 12.7
SND1Q7KZF4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.292e-8■■□□□ 12.7
SND1Q7KZF4 FERMT3-205ENST00000541252 714 ntTSL 316.75■□□□□ 0.274e-6■■□□□ 12.7
SND1Q7KZF4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.224e-6■■□□□ 12.7
SND1Q7KZF4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.214e-6■■□□□ 12.7
SND1Q7KZF4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.24e-6■■□□□ 12.7
SND1Q7KZF4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.26e-7■■□□□ 12.7
SND1Q7KZF4 STAT1-209ENST00000452281 2594 ntTSL 1 (best)16.12■□□□□ 0.174e-6■■□□□ 12.7
SND1Q7KZF4 NME3-211ENST00000568561 813 ntTSL 1 (best)16.02■□□□□ 0.166e-7■■□□□ 12.7
SND1Q7KZF4 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.094e-6■■□□□ 12.7
SND1Q7KZF4 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.024e-6■■□□□ 12.7
SND1Q7KZF4 MFSD11-210ENST00000588031 757 ntTSL 515.19■□□□□ 0.024e-6■■□□□ 12.7
SND1Q7KZF4 CLPTM1L-214ENST00000513250 567 ntTSL 314.93□□□□□ -0.024e-6■■□□□ 12.7
SND1Q7KZF4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.86□□□□□ -0.034e-6■■□□□ 12.7
SND1Q7KZF4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.84□□□□□ -0.034e-6■■□□□ 12.7
SND1Q7KZF4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.79□□□□□ -0.044e-6■■□□□ 12.7
SND1Q7KZF4 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.094e-6■■□□□ 12.7
SND1Q7KZF4 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.144e-6■■□□□ 12.7
SND1Q7KZF4 MFSD11-213ENST00000588670 834 ntTSL 514.2□□□□□ -0.144e-6■■□□□ 12.7
SND1Q7KZF4 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.194e-6■■□□□ 12.7
SND1Q7KZF4 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.24e-6■■□□□ 12.7
SND1Q7KZF4 CLPTM1L-203ENST00000503151 627 ntTSL 313.71□□□□□ -0.214e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.234e-6■■□□□ 12.7
SND1Q7KZF4 CALM1-214ENST00000557020 557 ntTSL 413.26□□□□□ -0.294e-6■■□□□ 12.7
SND1Q7KZF4 CLPTM1L-210ENST00000508765 631 ntTSL 313.2□□□□□ -0.34e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC13.08□□□□□ -0.324e-6■■□□□ 12.7
SND1Q7KZF4 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.324e-6■■□□□ 12.7
SND1Q7KZF4 COPB1-208ENST00000532088 510 ntTSL 313.01□□□□□ -0.334e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-204ENST00000449098 1599 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.394e-6■■□□□ 12.7
SND1Q7KZF4 C4orf3-201ENST00000399075 2960 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.414e-6■■□□□ 12.7
SND1Q7KZF4 NDUFS2-211ENST00000483804 1062 ntTSL 512.41□□□□□ -0.421e-7■■□□□ 12.7
SND1Q7KZF4 STAT1-212ENST00000540176 4216 ntTSL 5 BASIC12.36□□□□□ -0.434e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC12.32□□□□□ -0.444e-6■■□□□ 12.7
SND1Q7KZF4 ID3-202ENST00000463312 623 ntTSL 212.31□□□□□ -0.442e-8■■□□□ 12.7
SND1Q7KZF4 RPL36A-HNRNPH2-202ENST00000409338 572 ntTSL 4 BASIC11.79□□□□□ -0.524e-6■■□□□ 12.7
SND1Q7KZF4 SNRPG-207ENST00000480370 487 ntTSL 211.6□□□□□ -0.554e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPH2-201ENST00000316594 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.64e-6■■□□□ 12.7
SND1Q7KZF4 USP39-210ENST00000459775 2148 ntTSL 211.26□□□□□ -0.614e-6■■□□□ 12.7
SND1Q7KZF4 APEH-212ENST00000469362 830 ntTSL 311.22□□□□□ -0.614e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-214ENST00000554969 1924 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.624e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC11.04□□□□□ -0.644e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-232ENST00000557442 1308 ntTSL 210.99□□□□□ -0.654e-6■■□□□ 12.7
SND1Q7KZF4 SNRPG-208ENST00000482975 1093 ntTSL 1 (best) BASIC10.93□□□□□ -0.664e-6■■□□□ 12.7
SND1Q7KZF4 GBA-206ENST00000464536 559 ntTSL 210.9□□□□□ -0.664e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-213ENST00000554891 644 ntTSL 510.89□□□□□ -0.674e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC10.64□□□□□ -0.714e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC10.56□□□□□ -0.724e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-218ENST00000555215 781 ntTSL 510.39□□□□□ -0.754e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-209ENST00000554383 1039 ntTSL 510.39□□□□□ -0.754e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-219ENST00000555309 1714 ntTSL 5 BASIC10.3□□□□□ -0.764e-6■■□□□ 12.7
SND1Q7KZF4 SNRPG-204ENST00000438261 515 ntTSL 2 BASIC10.27□□□□□ -0.774e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-224ENST00000556226 629 ntTSL 510.08□□□□□ -0.84e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC10.07□□□□□ -0.84e-6■■□□□ 12.7
SND1Q7KZF4 STAT1-204ENST00000409465 3097 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.814e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-216ENST00000555137 789 ntTSL 39.96□□□□□ -0.824e-6■■□□□ 12.7
Retrieved 100 of 13,567 protein–RNA pairs in 364.5 ms