RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 NISCHQ9Y2I1 1504 aa24.92■■□□□ 1.58
HNRNPC-208ENST00000553753 CCDC180Q9P1Z9 1646 aa22.17■■□□□ 1.14
HNRNPC-208ENST00000553753 ABCC9O60706 1549 aa21.84■■□□□ 1.09
HNRNPC-208ENST00000553753 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
HNRNPC-208ENST00000553753 DCAF8L2P0C7V8 631 aa20.94■□□□□ 0.94
HNRNPC-208ENST00000553753 NACADO15069 1562 aa20.9■□□□□ 0.94
HNRNPC-208ENST00000553753 MYO15BQ96JP2 1530 aa20.74■□□□□ 0.91
HNRNPC-208ENST00000553753 ZCCHC6Q5VYS8 1495 aaKnown RBP20.73■□□□□ 0.91
HNRNPC-208ENST00000553753 DCAF1Q9Y4B6 1507 aa20.61■□□□□ 0.89
HNRNPC-208ENST00000553753 UNC13AQ9UPW8 1703 aa20.45■□□□□ 0.86
HNRNPC-208ENST00000553753 PABPN1Q86U42 306 aaKnown RBP eCLIP20.43■□□□□ 0.86
HNRNPC-208ENST00000553753 BICRAQ9NZM4 1560 aa20.31■□□□□ 0.84
HNRNPC-208ENST00000553753 SCRIBQ14160 1630 aa20.24■□□□□ 0.83
HNRNPC-208ENST00000553753 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
HNRNPC-208ENST00000553753 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
HNRNPC-208ENST00000553753 EIF4G1Q04637 1599 aaKnown RBP19.8■□□□□ 0.76
HNRNPC-208ENST00000553753 CC2D2AQ9P2K1 1620 aa19.74■□□□□ 0.75
HNRNPC-208ENST00000553753 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
HNRNPC-208ENST00000553753 SMARCA4P51532 1647 aa19.35■□□□□ 0.69
HNRNPC-208ENST00000553753 BAZ1AQ9NRL2 1556 aaPredicted RBP19.32■□□□□ 0.68
HNRNPC-208ENST00000553753 NCAPD3P42695 1498 aa19.31■□□□□ 0.68
HNRNPC-208ENST00000553753 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
HNRNPC-208ENST00000553753 SMARCA2P51531 1590 aa19.25■□□□□ 0.67
HNRNPC-208ENST00000553753 MROH2BQ7Z745 1585 aa19.21■□□□□ 0.67
HNRNPC-208ENST00000553753 HMGXB3Q12766 1538 aa19.17■□□□□ 0.66
HNRNPC-208ENST00000553753 PEG3Q9GZU2 1588 aa19.17■□□□□ 0.66
HNRNPC-208ENST00000553753 BAZ1BQ9UIG0 1483 aaKnown RBP19.12■□□□□ 0.65
HNRNPC-208ENST00000553753 WIZO95785 1651 aa18.98■□□□□ 0.63
HNRNPC-208ENST00000553753 RSF1Q96T23 1441 aaPredicted RBP18.96■□□□□ 0.63
HNRNPC-208ENST00000553753 NESP48681 1621 aa18.87■□□□□ 0.61
HNRNPC-208ENST00000553753 ERCC6Q03468 1493 aa18.84■□□□□ 0.61
HNRNPC-208ENST00000553753 LAMC3Q9Y6N6 1575 aa18.8■□□□□ 0.6
HNRNPC-208ENST00000553753 TOP2AP11388 1531 aaKnown RBP18.77■□□□□ 0.59
HNRNPC-208ENST00000553753 CADPSQ9ULU8 1353 aa18.75■□□□□ 0.59
HNRNPC-208ENST00000553753 PDS5BQ9NTI5 1447 aa18.7■□□□□ 0.58
HNRNPC-208ENST00000553753 CUX2O14529 1486 aa18.67■□□□□ 0.58
HNRNPC-208ENST00000553753 KIF21AQ7Z4S6 1674 aa18.61■□□□□ 0.57
HNRNPC-208ENST00000553753 CFTRP13569 1480 aa18.6■□□□□ 0.57
HNRNPC-208ENST00000553753 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.56
HNRNPC-208ENST00000553753 THOC2Q8NI27 1593 aaKnown RBP18.57■□□□□ 0.56
HNRNPC-208ENST00000553753 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.55
HNRNPC-208ENST00000553753 CEP164Q9UPV0 1460 aa18.5■□□□□ 0.55
HNRNPC-208ENST00000553753 MRC2Q9UBG0 1479 aa18.49■□□□□ 0.55
HNRNPC-208ENST00000553753 SUPT5HO00267 1087 aaKnown RBP18.43■□□□□ 0.54
HNRNPC-208ENST00000553753 WDR62O43379 1518 aa18.43■□□□□ 0.54
HNRNPC-208ENST00000553753 PRDM2Q13029 1718 aa18.4■□□□□ 0.54
HNRNPC-208ENST00000553753 URB2Q14146 1524 aaKnown RBP18.33■□□□□ 0.52
HNRNPC-208ENST00000553753 DNAJC5Q9H3Z4 198 aa18.27■□□□□ 0.52
HNRNPC-208ENST00000553753 ABCC8Q09428 1581 aa18.21■□□□□ 0.51
HNRNPC-208ENST00000553753 TOPBP1Q92547 1522 aa18.2■□□□□ 0.5
HNRNPC-208ENST00000553753 DNMBPQ6XZF7 1577 aa18.15■□□□□ 0.5
HNRNPC-208ENST00000553753 IFT140Q96RY7 1462 aa18.12■□□□□ 0.49
HNRNPC-208ENST00000553753 ZNF608Q9ULD9 1512 aaPredicted RBP18.05■□□□□ 0.48
HNRNPC-208ENST00000553753 POLA1P09884 1462 aaPredicted RBP18.04■□□□□ 0.48
HNRNPC-208ENST00000553753 CUX1P39880 1505 aa18.02■□□□□ 0.47
HNRNPC-208ENST00000553753 TARBP1Q13395 1621 aaKnown RBP18■□□□□ 0.47
HNRNPC-208ENST00000553753 SOGA1O94964 1423 aa17.99■□□□□ 0.47
HNRNPC-208ENST00000553753 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
HNRNPC-208ENST00000553753 RAD54L2Q9Y4B4 1467 aa17.98■□□□□ 0.47
HNRNPC-208ENST00000553753 EIF4G3O43432 1585 aaKnown RBP17.95■□□□□ 0.46
HNRNPC-208ENST00000553753 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.462e-7■■■■□ 24.5
HNRNPC-208ENST00000553753 OSCARQ8IYS5 282 aa17.93■□□□□ 0.46
HNRNPC-208ENST00000553753 TDRD9Q8NDG6 1382 aaKnown RBP17.9■□□□□ 0.46
HNRNPC-208ENST00000553753 WRNQ14191 1432 aaPredicted RBP eCLIP17.88■□□□□ 0.45
HNRNPC-208ENST00000553753 WDR97A6NE52 1622 aa17.84■□□□□ 0.45
HNRNPC-208ENST00000553753 TOP2BQ02880 1626 aa17.83■□□□□ 0.45
HNRNPC-208ENST00000553753 SYNJ1O43426 1573 aa17.82■□□□□ 0.44
HNRNPC-208ENST00000553753 BIVM-ERCC5R4GMW8 1640 aa17.81■□□□□ 0.44
HNRNPC-208ENST00000553753 ABCA10Q8WWZ4 1543 aa17.8■□□□□ 0.44
HNRNPC-208ENST00000553753 FBLN2P98095 1184 aa17.79■□□□□ 0.44
HNRNPC-208ENST00000553753 GRIN2BQ13224 1484 aa17.78■□□□□ 0.44
HNRNPC-208ENST00000553753 GAPVD1Q14C86 1478 aa17.77■□□□□ 0.44
HNRNPC-208ENST00000553753 SNAPC4Q5SXM2 1469 aa17.76■□□□□ 0.43
HNRNPC-208ENST00000553753 MAGI1Q96QZ7 1491 aaPredicted RBP17.73■□□□□ 0.43
HNRNPC-208ENST00000553753 CHD1O14646 1710 aa17.73■□□□□ 0.43
HNRNPC-208ENST00000553753 CHMP7Q8WUX9 453 aaPredicted RBP17.72■□□□□ 0.43
HNRNPC-208ENST00000553753 ABCA5Q8WWZ7 1642 aa17.72■□□□□ 0.43
HNRNPC-208ENST00000553753 PBRM1Q86U86 1689 aa17.69■□□□□ 0.42
HNRNPC-208ENST00000553753 SYNJ2O15056 1496 aa17.67■□□□□ 0.42
HNRNPC-208ENST00000553753 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
HNRNPC-208ENST00000553753 ARHGEF11O15085 1522 aa17.59■□□□□ 0.41
HNRNPC-208ENST00000553753 ERICH3Q5RHP9 1530 aa17.59■□□□□ 0.41
HNRNPC-208ENST00000553753 RIMBP3CA6NJZ7 1639 aa17.59■□□□□ 0.41
HNRNPC-208ENST00000553753 RIMBP3BA6NNM3 1639 aa17.59■□□□□ 0.41
HNRNPC-208ENST00000553753 RIMBP3Q9UFD9 1639 aa17.59■□□□□ 0.41
HNRNPC-208ENST00000553753 FHAD1B1AJZ9 1412 aa17.56■□□□□ 0.4
HNRNPC-208ENST00000553753 ADAMTS12P58397 1594 aa17.55■□□□□ 0.4
HNRNPC-208ENST00000553753 CLASP1Q7Z460 1538 aa17.55■□□□□ 0.4
HNRNPC-208ENST00000553753 GRIN2AQ12879 1464 aa17.54■□□□□ 0.4
HNRNPC-208ENST00000553753 KIF27Q86VH2 1401 aa17.52■□□□□ 0.4
HNRNPC-208ENST00000553753 CYB5RLQ6IPT4 315 aa17.48■□□□□ 0.39
HNRNPC-208ENST00000553753 IGF1RP08069 1367 aa17.48■□□□□ 0.39
HNRNPC-208ENST00000553753 NUP160Q12769 1436 aa17.47■□□□□ 0.39
HNRNPC-208ENST00000553753 CEP170Q5SW79 1584 aa17.44■□□□□ 0.38
HNRNPC-208ENST00000553753 ARAP1Q96P48 1450 aa17.44■□□□□ 0.38
HNRNPC-208ENST00000553753 CUL7Q14999 1698 aa17.39■□□□□ 0.37
HNRNPC-208ENST00000553753 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
HNRNPC-208ENST00000553753 JPH4Q96JJ6 628 aa17.33■□□□□ 0.37
HNRNPC-208ENST00000553753 SHROOM2Q13796 1616 aa17.33■□□□□ 0.36
HNRNPC-208ENST00000553753 RUSC2Q8N2Y8 1516 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms