RNA–Protein interactions for RNA: ENST00000541272.1

UBC-209, Transcript of ubiquitin C, humanhuman

TSL 5

Gene UBC, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-209ENST00000541272 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
UBC-209ENST00000541272 ABCC9O60706 1549 aa27.23■■□□□ 1.95
UBC-209ENST00000541272 CCDC180Q9P1Z9 1646 aa27.12■■□□□ 1.93
UBC-209ENST00000541272 RB1CC1Q8TDY2 1594 aa25.96■■□□□ 1.75
UBC-209ENST00000541272 DNAJC5BQ9UF47 199 aa25.86■■□□□ 1.73
UBC-209ENST00000541272 NACADO15069 1562 aa25.76■■□□□ 1.71
UBC-209ENST00000541272 MYO15BQ96JP2 1530 aa25.43■■□□□ 1.66
UBC-209ENST00000541272 PABPN1Q86U42 306 aaKnown RBP eCLIP25.25■■□□□ 1.63
UBC-209ENST00000541272 DCAF8L2P0C7V8 631 aa25.22■■□□□ 1.63
UBC-209ENST00000541272 UNC13AQ9UPW8 1703 aa25.18■■□□□ 1.62
UBC-209ENST00000541272 BICRAQ9NZM4 1560 aa25.11■■□□□ 1.61
UBC-209ENST00000541272 SHROOM4Q9ULL8 1493 aa25.06■■□□□ 1.6
UBC-209ENST00000541272 DCAF1Q9Y4B6 1507 aa24.91■■□□□ 1.58
UBC-209ENST00000541272 ZCCHC6Q5VYS8 1495 aaKnown RBP24.76■■□□□ 1.55
UBC-209ENST00000541272 CECR2Q9BXF3 1484 aa24.67■■□□□ 1.54
UBC-209ENST00000541272 CC2D2AQ9P2K1 1620 aa24.66■■□□□ 1.54
UBC-209ENST00000541272 EIF4G1Q04637 1599 aaKnown RBP24.56■■□□□ 1.52
UBC-209ENST00000541272 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
UBC-209ENST00000541272 DNAJC5Q9H3Z4 198 aa24.21■■□□□ 1.47
UBC-209ENST00000541272 CUX2O14529 1486 aa23.87■■□□□ 1.41
UBC-209ENST00000541272 NCAPD3P42695 1498 aa23.79■■□□□ 1.4
UBC-209ENST00000541272 ERCC6Q03468 1493 aa23.62■■□□□ 1.37
UBC-209ENST00000541272 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
UBC-209ENST00000541272 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
UBC-209ENST00000541272 SMARCA2P51531 1590 aa23.55■■□□□ 1.36
UBC-209ENST00000541272 SMARCA4P51532 1647 aa23.4■■□□□ 1.34
UBC-209ENST00000541272 PEG3Q9GZU2 1588 aa23.33■■□□□ 1.33
UBC-209ENST00000541272 BAZ1AQ9NRL2 1556 aaPredicted RBP23.32■■□□□ 1.32
UBC-209ENST00000541272 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
UBC-209ENST00000541272 LAMC3Q9Y6N6 1575 aa23.28■■□□□ 1.32
UBC-209ENST00000541272 NESP48681 1621 aa23.26■■□□□ 1.31
UBC-209ENST00000541272 THOC2Q8NI27 1593 aaKnown RBP23.21■■□□□ 1.31
UBC-209ENST00000541272 PDS5BQ9NTI5 1447 aa23.18■■□□□ 1.3
UBC-209ENST00000541272 CADPSQ9ULU8 1353 aa23■■□□□ 1.27
UBC-209ENST00000541272 MROH2BQ7Z745 1585 aa22.97■■□□□ 1.27
UBC-209ENST00000541272 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
UBC-209ENST00000541272 MRC2Q9UBG0 1479 aa22.91■■□□□ 1.26
UBC-209ENST00000541272 WDR62O43379 1518 aa22.88■■□□□ 1.25
UBC-209ENST00000541272 CEP164Q9UPV0 1460 aa22.74■■□□□ 1.23
UBC-209ENST00000541272 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
UBC-209ENST00000541272 OSCARQ8IYS5 282 aa22.67■■□□□ 1.22
UBC-209ENST00000541272 CFTRP13569 1480 aa22.66■■□□□ 1.22
UBC-209ENST00000541272 FANCD2Q9BXW9 1451 aa22.66■■□□□ 1.22
UBC-209ENST00000541272 WIZO95785 1651 aa22.63■■□□□ 1.21
UBC-209ENST00000541272 TOP2AP11388 1531 aaKnown RBP22.46■■□□□ 1.19
UBC-209ENST00000541272 URB2Q14146 1524 aaKnown RBP22.45■■□□□ 1.18
UBC-209ENST00000541272 RSF1Q96T23 1441 aaPredicted RBP22.43■■□□□ 1.18
UBC-209ENST00000541272 IFT140Q96RY7 1462 aa22.35■■□□□ 1.17
UBC-209ENST00000541272 PRDM2Q13029 1718 aa22.34■■□□□ 1.17
UBC-209ENST00000541272 ABCC8Q09428 1581 aa22.32■■□□□ 1.16
UBC-209ENST00000541272 RIMBP3CA6NJZ7 1639 aa22.28■■□□□ 1.16
UBC-209ENST00000541272 RIMBP3BA6NNM3 1639 aa22.28■■□□□ 1.16
UBC-209ENST00000541272 RIMBP3Q9UFD9 1639 aa22.28■■□□□ 1.16
UBC-209ENST00000541272 ARHGEF11O15085 1522 aa22.21■■□□□ 1.15
UBC-209ENST00000541272 TOPBP1Q92547 1522 aa22.18■■□□□ 1.14
UBC-209ENST00000541272 ZNF608Q9ULD9 1512 aaPredicted RBP22.18■■□□□ 1.14
UBC-209ENST00000541272 CCDC88BA6NC98 1476 aa22.16■■□□□ 1.14
UBC-209ENST00000541272 DNMBPQ6XZF7 1577 aa22.1■■□□□ 1.13
UBC-209ENST00000541272 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.12
UBC-209ENST00000541272 CYB5RLQ6IPT4 315 aa22.03■■□□□ 1.12
UBC-209ENST00000541272 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.11
UBC-209ENST00000541272 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
UBC-209ENST00000541272 AQRO60306 1485 aaKnown RBP eCLIP21.96■■□□□ 1.118e-18■■■■■ 28.7
UBC-209ENST00000541272 ARAP1Q96P48 1450 aa21.94■■□□□ 1.1
UBC-209ENST00000541272 POLA1P09884 1462 aaPredicted RBP21.93■■□□□ 1.1
UBC-209ENST00000541272 CHD1O14646 1710 aa21.92■■□□□ 1.1
UBC-209ENST00000541272 TRHP20396 242 aaPredicted RBP21.87■■□□□ 1.09
UBC-209ENST00000541272 SOGA1O94964 1423 aa21.86■■□□□ 1.09
UBC-209ENST00000541272 FBLN2P98095 1184 aa21.85■■□□□ 1.09
UBC-209ENST00000541272 MAGI1Q96QZ7 1491 aaPredicted RBP21.82■■□□□ 1.08
UBC-209ENST00000541272 CLASP1Q7Z460 1538 aa21.8■■□□□ 1.08
UBC-209ENST00000541272 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
UBC-209ENST00000541272 TDRD9Q8NDG6 1382 aaKnown RBP21.76■■□□□ 1.07
UBC-209ENST00000541272 CHMP7Q8WUX9 453 aaPredicted RBP21.76■■□□□ 1.07
UBC-209ENST00000541272 RAD54L2Q9Y4B4 1467 aa21.76■■□□□ 1.07
UBC-209ENST00000541272 GRIN2BQ13224 1484 aa21.74■■□□□ 1.07
UBC-209ENST00000541272 SNAPC4Q5SXM2 1469 aa21.74■■□□□ 1.07
UBC-209ENST00000541272 SYNJ2O15056 1496 aa21.71■■□□□ 1.07
UBC-209ENST00000541272 FGD5Q6ZNL6 1462 aa21.71■■□□□ 1.07
UBC-209ENST00000541272 CUX1P39880 1505 aa21.61■■□□□ 1.05
UBC-209ENST00000541272 GAPVD1Q14C86 1478 aa21.58■■□□□ 1.04
UBC-209ENST00000541272 AEBP2Q6ZN18 517 aaPredicted RBP21.57■■□□□ 1.04
UBC-209ENST00000541272 ABCA10Q8WWZ4 1543 aa21.55■■□□□ 1.04
UBC-209ENST00000541272 PBRM1Q86U86 1689 aa21.5■■□□□ 1.03
UBC-209ENST00000541272 ABCA5Q8WWZ7 1642 aa21.48■■□□□ 1.03
UBC-209ENST00000541272 GRIN2AQ12879 1464 aa21.42■■□□□ 1.02
UBC-209ENST00000541272 NUP160Q12769 1436 aa21.41■■□□□ 1.02
UBC-209ENST00000541272 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.02
UBC-209ENST00000541272 SHROOM2Q13796 1616 aa21.34■■□□□ 1.01
UBC-209ENST00000541272 FHAD1B1AJZ9 1412 aa21.34■■□□□ 1.01
UBC-209ENST00000541272 CEP170Q5SW79 1584 aa21.32■■□□□ 1
UBC-209ENST00000541272 ADAMTS12P58397 1594 aa21.31■■□□□ 1
UBC-209ENST00000541272 ERICH3Q5RHP9 1530 aa21.3■■□□□ 1
UBC-209ENST00000541272 ERCC6L2Q5T890 1561 aa21.26■□□□□ 0.99
UBC-209ENST00000541272 TOP2BQ02880 1626 aa21.25■□□□□ 0.99
UBC-209ENST00000541272 BIVM-ERCC5R4GMW8 1640 aa21.24■□□□□ 0.99
UBC-209ENST00000541272 JPH4Q96JJ6 628 aa21.18■□□□□ 0.98
UBC-209ENST00000541272 PRG4Q92954 1404 aaPredicted RBP21.15■□□□□ 0.98
UBC-209ENST00000541272 KIF13AQ9H1H9 1805 aa21.13■□□□□ 0.97
UBC-209ENST00000541272 NPM1P06748 294 aaKnown RBP eCLIP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms