RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 NISCHQ9Y2I1 1504 aa20.97■□□□□ 0.95
APP-214ENST00000466453 ABCC9O60706 1549 aa20.42■□□□□ 0.86
APP-214ENST00000466453 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
APP-214ENST00000466453 DNAJC5Q9H3Z4 198 aa19.41■□□□□ 0.7
APP-214ENST00000466453 CCDC180Q9P1Z9 1646 aa19.38■□□□□ 0.69
APP-214ENST00000466453 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
APP-214ENST00000466453 PABPN1Q86U42 306 aaKnown RBP eCLIP18.78■□□□□ 0.6
APP-214ENST00000466453 UNC13AQ9UPW8 1703 aa18.58■□□□□ 0.57
APP-214ENST00000466453 NACADO15069 1562 aa18.57■□□□□ 0.56
APP-214ENST00000466453 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
APP-214ENST00000466453 BICRAQ9NZM4 1560 aa18.49■□□□□ 0.55
APP-214ENST00000466453 CC2D2AQ9P2K1 1620 aa18.43■□□□□ 0.54
APP-214ENST00000466453 SHROOM4Q9ULL8 1493 aa18.16■□□□□ 0.5
APP-214ENST00000466453 CUX2O14529 1486 aa18.14■□□□□ 0.5
APP-214ENST00000466453 EIF4G1Q04637 1599 aaKnown RBP18.12■□□□□ 0.49
APP-214ENST00000466453 DCAF8L2P0C7V8 631 aa18.03■□□□□ 0.48
APP-214ENST00000466453 TRIM41Q8WV44 630 aa18■□□□□ 0.47
APP-214ENST00000466453 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
APP-214ENST00000466453 ERCC6Q03468 1493 aa17.71■□□□□ 0.43
APP-214ENST00000466453 SCRIBQ14160 1630 aa17.53■□□□□ 0.4
APP-214ENST00000466453 THOC2Q8NI27 1593 aaKnown RBP17.35■□□□□ 0.37
APP-214ENST00000466453 DCAF1Q9Y4B6 1507 aa17.3■□□□□ 0.36
APP-214ENST00000466453 AEBP2Q6ZN18 517 aaPredicted RBP17.23■□□□□ 0.35
APP-214ENST00000466453 NESP48681 1621 aa17.22■□□□□ 0.35
APP-214ENST00000466453 NCAPD3P42695 1498 aa17.15■□□□□ 0.34
APP-214ENST00000466453 ZCCHC6Q5VYS8 1495 aaKnown RBP17.15■□□□□ 0.34
APP-214ENST00000466453 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
APP-214ENST00000466453 SMARCA2P51531 1590 aa17.07■□□□□ 0.32
APP-214ENST00000466453 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
APP-214ENST00000466453 RIMBP3CA6NJZ7 1639 aa17.01■□□□□ 0.31
APP-214ENST00000466453 RIMBP3BA6NNM3 1639 aa17.01■□□□□ 0.31
APP-214ENST00000466453 RIMBP3Q9UFD9 1639 aa17.01■□□□□ 0.31
APP-214ENST00000466453 KIF21AQ7Z4S6 1674 aa17■□□□□ 0.31
APP-214ENST00000466453 LAMC3Q9Y6N6 1575 aa16.96■□□□□ 0.31
APP-214ENST00000466453 HMGXB3Q12766 1538 aa16.94■□□□□ 0.3
APP-214ENST00000466453 ATAD2BQ9ULI0 1458 aa16.93■□□□□ 0.3
APP-214ENST00000466453 PDS5BQ9NTI5 1447 aa16.87■□□□□ 0.29
APP-214ENST00000466453 TRHP20396 242 aaPredicted RBP16.86■□□□□ 0.29
APP-214ENST00000466453 ARHGEF11O15085 1522 aa16.84■□□□□ 0.29
APP-214ENST00000466453 WDR62O43379 1518 aa16.84■□□□□ 0.29
APP-214ENST00000466453 MRC2Q9UBG0 1479 aa16.81■□□□□ 0.28
APP-214ENST00000466453 ILDR1Q86SU0 546 aaPredicted RBP16.78■□□□□ 0.28
APP-214ENST00000466453 CYB5RLQ6IPT4 315 aa16.69■□□□□ 0.26
APP-214ENST00000466453 BAZ1BQ9UIG0 1483 aaKnown RBP16.68■□□□□ 0.26
APP-214ENST00000466453 SMARCA4P51532 1647 aa16.63■□□□□ 0.25
APP-214ENST00000466453 ARAP1Q96P48 1450 aa16.6■□□□□ 0.25
APP-214ENST00000466453 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
APP-214ENST00000466453 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
APP-214ENST00000466453 CEP164Q9UPV0 1460 aa16.49■□□□□ 0.23
APP-214ENST00000466453 RSF1Q96T23 1441 aaPredicted RBP16.38■□□□□ 0.21
APP-214ENST00000466453 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
APP-214ENST00000466453 URB2Q14146 1524 aaKnown RBP16.31■□□□□ 0.2
APP-214ENST00000466453 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
APP-214ENST00000466453 CHD1O14646 1710 aa16.28■□□□□ 0.2
APP-214ENST00000466453 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
APP-214ENST00000466453 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
APP-214ENST00000466453 CFTRP13569 1480 aa16.13■□□□□ 0.17
APP-214ENST00000466453 MROH2BQ7Z745 1585 aa16.13■□□□□ 0.17
APP-214ENST00000466453 KDM4FA0A1W2PPD8 638 aa16.09■□□□□ 0.17
APP-214ENST00000466453 CLASP1Q7Z460 1538 aa16.08■□□□□ 0.16
APP-214ENST00000466453 FBLN2P98095 1184 aa16.02■□□□□ 0.16
APP-214ENST00000466453 ERCC6L2Q5T890 1561 aa16.01■□□□□ 0.15
APP-214ENST00000466453 AQRO60306 1485 aaKnown RBP eCLIP15.97■□□□□ 0.15
APP-214ENST00000466453 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
APP-214ENST00000466453 KIF13AQ9H1H9 1805 aa15.96■□□□□ 0.14
APP-214ENST00000466453 FBXO41Q8TF61 875 aa15.94■□□□□ 0.14
APP-214ENST00000466453 SYNJ1O43426 1573 aa15.93■□□□□ 0.14
APP-214ENST00000466453 PRDM2Q13029 1718 aa15.93■□□□□ 0.14
APP-214ENST00000466453 TOPBP1Q92547 1522 aa15.93■□□□□ 0.14
APP-214ENST00000466453 LMTK3Q96Q04 1460 aa15.91■□□□□ 0.14
APP-214ENST00000466453 TARBP1Q13395 1621 aaKnown RBP15.9■□□□□ 0.14
APP-214ENST00000466453 HECW2Q9P2P5 1572 aa15.89■□□□□ 0.13
APP-214ENST00000466453 WIZO95785 1651 aa15.87■□□□□ 0.13
APP-214ENST00000466453 ABCC8Q09428 1581 aa15.82■□□□□ 0.12
APP-214ENST00000466453 SOCS7O14512 581 aa15.81■□□□□ 0.12
APP-214ENST00000466453 SNAPC4Q5SXM2 1469 aa15.8■□□□□ 0.12
APP-214ENST00000466453 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
APP-214ENST00000466453 KDM6BO15054 1643 aa15.77■□□□□ 0.12
APP-214ENST00000466453 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
APP-214ENST00000466453 MAGI1Q96QZ7 1491 aaPredicted RBP15.73■□□□□ 0.11
APP-214ENST00000466453 ADGRL1O94910 1474 aa15.71■□□□□ 0.11
APP-214ENST00000466453 WDR97A6NE52 1622 aa15.7■□□□□ 0.1
APP-214ENST00000466453 POLA1P09884 1462 aaPredicted RBP15.7■□□□□ 0.1
APP-214ENST00000466453 SYNJ2O15056 1496 aa15.69■□□□□ 0.1
APP-214ENST00000466453 ABCC10Q5T3U5 1492 aa15.68■□□□□ 0.1
APP-214ENST00000466453 TDRD9Q8NDG6 1382 aaKnown RBP15.67■□□□□ 0.1
APP-214ENST00000466453 ILDR2Q71H61 639 aa15.67■□□□□ 0.1
APP-214ENST00000466453 FAM69CQ0P6D2 419 aa15.64■□□□□ 0.09
APP-214ENST00000466453 DIP2BQ9P265 1576 aa15.62■□□□□ 0.09
APP-214ENST00000466453 RAD54L2Q9Y4B4 1467 aa15.62■□□□□ 0.09
APP-214ENST00000466453 TOP2AP11388 1531 aaKnown RBP15.62■□□□□ 0.09
APP-214ENST00000466453 GRIN2BQ13224 1484 aa15.59■□□□□ 0.09
APP-214ENST00000466453 CEP170Q5SW79 1584 aa15.57■□□□□ 0.08
APP-214ENST00000466453 SOGA1O94964 1423 aa15.56■□□□□ 0.08
APP-214ENST00000466453 MAPKBP1O60336 1514 aa15.56■□□□□ 0.08
APP-214ENST00000466453 TSPOAP1O95153 1857 aa15.54■□□□□ 0.08
APP-214ENST00000466453 DISP3Q9P2K9 1392 aa15.53■□□□□ 0.08
APP-214ENST00000466453 SHROOM2Q13796 1616 aa15.5■□□□□ 0.07
APP-214ENST00000466453 PBRM1Q86U86 1689 aa15.48■□□□□ 0.07
APP-214ENST00000466453 CCDC88BA6NC98 1476 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms