RNA–Protein interactions for RNA: ENST00000420743.6

HNRNPC-202, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2 BASIC

Gene HNRNPC, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-202ENST00000420743 NISCHQ9Y2I1 1504 aa29.22■■■□□ 2.27
HNRNPC-202ENST00000420743 CCDC180Q9P1Z9 1646 aa25.97■■□□□ 1.75
HNRNPC-202ENST00000420743 ABCC9O60706 1549 aa25.66■■□□□ 1.7
HNRNPC-202ENST00000420743 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.52
HNRNPC-202ENST00000420743 RB1CC1Q8TDY2 1594 aa24.52■■□□□ 1.52
HNRNPC-202ENST00000420743 NACADO15069 1562 aa24.44■■□□□ 1.5
HNRNPC-202ENST00000420743 ZCCHC6Q5VYS8 1495 aaKnown RBP24.32■■□□□ 1.48
HNRNPC-202ENST00000420743 MYO15BQ96JP2 1530 aa24.2■■□□□ 1.47
HNRNPC-202ENST00000420743 DCAF1Q9Y4B6 1507 aa24.08■■□□□ 1.45
HNRNPC-202ENST00000420743 UNC13AQ9UPW8 1703 aa24.07■■□□□ 1.44
HNRNPC-202ENST00000420743 PABPN1Q86U42 306 aaKnown RBP eCLIP24■■□□□ 1.43
HNRNPC-202ENST00000420743 BICRAQ9NZM4 1560 aa23.85■■□□□ 1.41
HNRNPC-202ENST00000420743 SCRIBQ14160 1630 aa23.83■■□□□ 1.4
HNRNPC-202ENST00000420743 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
HNRNPC-202ENST00000420743 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
HNRNPC-202ENST00000420743 EIF4G1Q04637 1599 aaKnown RBP23.22■■□□□ 1.31
HNRNPC-202ENST00000420743 CC2D2AQ9P2K1 1620 aa23.17■■□□□ 1.3
HNRNPC-202ENST00000420743 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.27
HNRNPC-202ENST00000420743 SMARCA4P51532 1647 aa22.72■■□□□ 1.23
HNRNPC-202ENST00000420743 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
HNRNPC-202ENST00000420743 ATAD2BQ9ULI0 1458 aa22.61■■□□□ 1.21
HNRNPC-202ENST00000420743 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.2
HNRNPC-202ENST00000420743 NCAPD3P42695 1498 aa22.57■■□□□ 1.2
HNRNPC-202ENST00000420743 SMARCA2P51531 1590 aa22.53■■□□□ 1.2
HNRNPC-202ENST00000420743 HMGXB3Q12766 1538 aa22.44■■□□□ 1.18
HNRNPC-202ENST00000420743 PEG3Q9GZU2 1588 aa22.43■■□□□ 1.18
HNRNPC-202ENST00000420743 BAZ1BQ9UIG0 1483 aaKnown RBP22.42■■□□□ 1.18
HNRNPC-202ENST00000420743 WIZO95785 1651 aa22.35■■□□□ 1.17
HNRNPC-202ENST00000420743 RSF1Q96T23 1441 aaPredicted RBP22.25■■□□□ 1.15
HNRNPC-202ENST00000420743 NESP48681 1621 aa22.19■■□□□ 1.14
HNRNPC-202ENST00000420743 ERCC6Q03468 1493 aa22.08■■□□□ 1.12
HNRNPC-202ENST00000420743 TOP2AP11388 1531 aaKnown RBP22.02■■□□□ 1.12
HNRNPC-202ENST00000420743 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
HNRNPC-202ENST00000420743 CADPSQ9ULU8 1353 aa21.93■■□□□ 1.1
HNRNPC-202ENST00000420743 KIF21AQ7Z4S6 1674 aa21.9■■□□□ 1.1
HNRNPC-202ENST00000420743 PDS5BQ9NTI5 1447 aa21.85■■□□□ 1.09
HNRNPC-202ENST00000420743 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
HNRNPC-202ENST00000420743 CUX2O14529 1486 aa21.81■■□□□ 1.08
HNRNPC-202ENST00000420743 CCDC88BA6NC98 1476 aa21.8■■□□□ 1.08
HNRNPC-202ENST00000420743 CFTRP13569 1480 aa21.78■■□□□ 1.08
HNRNPC-202ENST00000420743 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
HNRNPC-202ENST00000420743 SUPT5HO00267 1087 aaKnown RBP21.69■■□□□ 1.06
HNRNPC-202ENST00000420743 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
HNRNPC-202ENST00000420743 MRC2Q9UBG0 1479 aa21.66■■□□□ 1.06
HNRNPC-202ENST00000420743 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
HNRNPC-202ENST00000420743 WDR62O43379 1518 aa21.6■■□□□ 1.05
HNRNPC-202ENST00000420743 URB2Q14146 1524 aaKnown RBP21.53■■□□□ 1.04
HNRNPC-202ENST00000420743 TOPBP1Q92547 1522 aa21.35■■□□□ 1.01
HNRNPC-202ENST00000420743 DNAJC5Q9H3Z4 198 aa21.32■■□□□ 1
HNRNPC-202ENST00000420743 DNMBPQ6XZF7 1577 aa21.29■■□□□ 1
HNRNPC-202ENST00000420743 ABCC8Q09428 1581 aa21.24■□□□□ 0.99
HNRNPC-202ENST00000420743 ZNF608Q9ULD9 1512 aaPredicted RBP21.21■□□□□ 0.99
HNRNPC-202ENST00000420743 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
HNRNPC-202ENST00000420743 CUX1P39880 1505 aa21.18■□□□□ 0.98
HNRNPC-202ENST00000420743 POLA1P09884 1462 aaPredicted RBP21.17■□□□□ 0.98
HNRNPC-202ENST00000420743 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
HNRNPC-202ENST00000420743 TARBP1Q13395 1621 aaKnown RBP21.13■□□□□ 0.97
HNRNPC-202ENST00000420743 FGD5Q6ZNL6 1462 aa21.11■□□□□ 0.97
HNRNPC-202ENST00000420743 EIF4G3O43432 1585 aaKnown RBP21.09■□□□□ 0.97
HNRNPC-202ENST00000420743 SOGA1O94964 1423 aa21.07■□□□□ 0.96
HNRNPC-202ENST00000420743 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.962e-7■■■■□ 24.5
HNRNPC-202ENST00000420743 TDRD9Q8NDG6 1382 aaKnown RBP21.02■□□□□ 0.96
HNRNPC-202ENST00000420743 SYNJ1O43426 1573 aa20.98■□□□□ 0.95
HNRNPC-202ENST00000420743 WRNQ14191 1432 aaPredicted RBP eCLIP20.97■□□□□ 0.95
HNRNPC-202ENST00000420743 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
HNRNPC-202ENST00000420743 WDR97A6NE52 1622 aa20.93■□□□□ 0.94
HNRNPC-202ENST00000420743 TOP2BQ02880 1626 aa20.92■□□□□ 0.94
HNRNPC-202ENST00000420743 BIVM-ERCC5R4GMW8 1640 aa20.92■□□□□ 0.94
HNRNPC-202ENST00000420743 CHD1O14646 1710 aa20.86■□□□□ 0.93
HNRNPC-202ENST00000420743 FBLN2P98095 1184 aa20.86■□□□□ 0.93
HNRNPC-202ENST00000420743 SNAPC4Q5SXM2 1469 aa20.85■□□□□ 0.93
HNRNPC-202ENST00000420743 ABCA10Q8WWZ4 1543 aa20.85■□□□□ 0.93
HNRNPC-202ENST00000420743 GAPVD1Q14C86 1478 aa20.82■□□□□ 0.92
HNRNPC-202ENST00000420743 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
HNRNPC-202ENST00000420743 PBRM1Q86U86 1689 aa20.81■□□□□ 0.92
HNRNPC-202ENST00000420743 ABCA5Q8WWZ7 1642 aa20.81■□□□□ 0.92
HNRNPC-202ENST00000420743 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
HNRNPC-202ENST00000420743 CHMP7Q8WUX9 453 aaPredicted RBP20.72■□□□□ 0.91
HNRNPC-202ENST00000420743 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
HNRNPC-202ENST00000420743 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
HNRNPC-202ENST00000420743 RIMBP3CA6NJZ7 1639 aa20.66■□□□□ 0.9
HNRNPC-202ENST00000420743 RIMBP3BA6NNM3 1639 aa20.66■□□□□ 0.9
HNRNPC-202ENST00000420743 RIMBP3Q9UFD9 1639 aa20.66■□□□□ 0.9
HNRNPC-202ENST00000420743 ADAMTS12P58397 1594 aa20.62■□□□□ 0.89
HNRNPC-202ENST00000420743 ARHGEF11O15085 1522 aa20.62■□□□□ 0.89
HNRNPC-202ENST00000420743 ERICH3Q5RHP9 1530 aa20.59■□□□□ 0.89
HNRNPC-202ENST00000420743 CLASP1Q7Z460 1538 aa20.59■□□□□ 0.89
HNRNPC-202ENST00000420743 GRIN2AQ12879 1464 aa20.57■□□□□ 0.88
HNRNPC-202ENST00000420743 FHAD1B1AJZ9 1412 aa20.55■□□□□ 0.88
HNRNPC-202ENST00000420743 KIF27Q86VH2 1401 aa20.51■□□□□ 0.87
HNRNPC-202ENST00000420743 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
HNRNPC-202ENST00000420743 CYB5RLQ6IPT4 315 aa20.48■□□□□ 0.87
HNRNPC-202ENST00000420743 IGF1RP08069 1367 aa20.47■□□□□ 0.87
HNRNPC-202ENST00000420743 ARAP1Q96P48 1450 aa20.47■□□□□ 0.87
HNRNPC-202ENST00000420743 NUP160Q12769 1436 aa20.45■□□□□ 0.86
HNRNPC-202ENST00000420743 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
HNRNPC-202ENST00000420743 ERCC6L2Q5T890 1561 aa20.39■□□□□ 0.86
HNRNPC-202ENST00000420743 CUL7Q14999 1698 aa20.38■□□□□ 0.85
HNRNPC-202ENST00000420743 CARMIL1Q5VZK9 1371 aa20.34■□□□□ 0.85
HNRNPC-202ENST00000420743 SHROOM2Q13796 1616 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms