RNA–Protein interactions for RNA: ENST00000553995.5

CALM1-208, Transcript of calmodulin 1, humanhuman

TSL 2

Gene CALM1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-208ENST00000553995 NISCHQ9Y2I1 1504 aa43.97■■■■■ 4.63
CALM1-208ENST00000553995 ABCC9O60706 1549 aa40.47■■■■■ 4.07
CALM1-208ENST00000553995 CCDC180Q9P1Z9 1646 aa39.81■■■■□ 3.96
CALM1-208ENST00000553995 DNAJC5BQ9UF47 199 aa38.55■■■■□ 3.76
CALM1-208ENST00000553995 RB1CC1Q8TDY2 1594 aa38.24■■■■□ 3.71
CALM1-208ENST00000553995 NACADO15069 1562 aa37.8■■■■□ 3.64
CALM1-208ENST00000553995 PABPN1Q86U42 306 aaKnown RBP eCLIP37.53■■■■□ 3.6
CALM1-208ENST00000553995 DCAF8L2P0C7V8 631 aa37.4■■■■□ 3.58
CALM1-208ENST00000553995 UNC13AQ9UPW8 1703 aa37.34■■■■□ 3.57
CALM1-208ENST00000553995 BICRAQ9NZM4 1560 aa37.11■■■■□ 3.53
CALM1-208ENST00000553995 MYO15BQ96JP2 1530 aa37.05■■■■□ 3.52
CALM1-208ENST00000553995 SHROOM4Q9ULL8 1493 aa36.62■■■■□ 3.45
CALM1-208ENST00000553995 CECR2Q9BXF3 1484 aa36.56■■■■□ 3.44
CALM1-208ENST00000553995 CC2D2AQ9P2K1 1620 aa36.53■■■■□ 3.44
CALM1-208ENST00000553995 DCAF1Q9Y4B6 1507 aa36.29■■■■□ 3.4
CALM1-208ENST00000553995 ZCCHC6Q5VYS8 1495 aaKnown RBP36.29■■■■□ 3.4
CALM1-208ENST00000553995 EIF4G1Q04637 1599 aaKnown RBP36.27■■■■□ 3.4
CALM1-208ENST00000553995 SCRIBQ14160 1630 aa36.19■■■■□ 3.38
CALM1-208ENST00000553995 DNAJC5Q9H3Z4 198 aa35.99■■■■□ 3.35
CALM1-208ENST00000553995 CUX2O14529 1486 aa35.22■■■■□ 3.23
CALM1-208ENST00000553995 ERCC6Q03468 1493 aa35.04■■■■□ 3.2
CALM1-208ENST00000553995 NCAPD3P42695 1498 aa34.89■■■■□ 3.18
CALM1-208ENST00000553995 ATAD2BQ9ULI0 1458 aa34.67■■■■□ 3.14
CALM1-208ENST00000553995 HMGXB3Q12766 1538 aa34.58■■■■□ 3.13
CALM1-208ENST00000553995 SMARCA2P51531 1590 aa34.57■■■■□ 3.13
CALM1-208ENST00000553995 NESP48681 1621 aa34.54■■■■□ 3.12
CALM1-208ENST00000553995 SMARCA4P51532 1647 aa34.46■■■■□ 3.11
CALM1-208ENST00000553995 THOC2Q8NI27 1593 aaKnown RBP34.36■■■■□ 3.09
CALM1-208ENST00000553995 BAZ1BQ9UIG0 1483 aaKnown RBP34.32■■■■□ 3.08
CALM1-208ENST00000553995 LAMC3Q9Y6N6 1575 aa34.23■■■■□ 3.07
CALM1-208ENST00000553995 BAZ1AQ9NRL2 1556 aaPredicted RBP34.19■■■■□ 3.06
CALM1-208ENST00000553995 PEG3Q9GZU2 1588 aa34.14■■■■□ 3.06
CALM1-208ENST00000553995 TRIM41Q8WV44 630 aa34.11■■■■□ 3.05
CALM1-208ENST00000553995 KIF21AQ7Z4S6 1674 aa34.09■■■■□ 3.05
CALM1-208ENST00000553995 PDS5BQ9NTI5 1447 aa34.07■■■■□ 3.04
CALM1-208ENST00000553995 MROH2BQ7Z745 1585 aa33.85■■■■□ 3.01
CALM1-208ENST00000553995 MRC2Q9UBG0 1479 aa33.81■■■■□ 3
CALM1-208ENST00000553995 CADPSQ9ULU8 1353 aa33.79■■■■□ 3
CALM1-208ENST00000553995 WDR62O43379 1518 aa33.74■■■□□ 2.99
CALM1-208ENST00000553995 CEP164Q9UPV0 1460 aa33.54■■■□□ 2.96
CALM1-208ENST00000553995 OSCARQ8IYS5 282 aa33.47■■■□□ 2.95
CALM1-208ENST00000553995 FANCD2Q9BXW9 1451 aa33.41■■■□□ 2.94
CALM1-208ENST00000553995 WIZO95785 1651 aa33.4■■■□□ 2.94
CALM1-208ENST00000553995 CFTRP13569 1480 aa33.25■■■□□ 2.91
CALM1-208ENST00000553995 URB2Q14146 1524 aaKnown RBP33.17■■■□□ 2.9
CALM1-208ENST00000553995 RIMBP3CA6NJZ7 1639 aa33.11■■■□□ 2.89
CALM1-208ENST00000553995 RIMBP3BA6NNM3 1639 aa33.11■■■□□ 2.89
CALM1-208ENST00000553995 RIMBP3Q9UFD9 1639 aa33.11■■■□□ 2.89
CALM1-208ENST00000553995 TOP2AP11388 1531 aaKnown RBP32.97■■■□□ 2.87
CALM1-208ENST00000553995 ARHGEF11O15085 1522 aa32.93■■■□□ 2.86
CALM1-208ENST00000553995 PRDM2Q13029 1718 aa32.9■■■□□ 2.86
CALM1-208ENST00000553995 IFT140Q96RY7 1462 aa32.89■■■□□ 2.86
CALM1-208ENST00000553995 RSF1Q96T23 1441 aaPredicted RBP32.88■■■□□ 2.85
CALM1-208ENST00000553995 ZNF608Q9ULD9 1512 aaPredicted RBP32.87■■■□□ 2.85
CALM1-208ENST00000553995 CYB5RLQ6IPT4 315 aa32.73■■■□□ 2.83
CALM1-208ENST00000553995 TOPBP1Q92547 1522 aa32.7■■■□□ 2.83
CALM1-208ENST00000553995 EIF4G3O43432 1585 aaKnown RBP32.68■■■□□ 2.82
CALM1-208ENST00000553995 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
CALM1-208ENST00000553995 TRHP20396 242 aaPredicted RBP32.61■■■□□ 2.81
CALM1-208ENST00000553995 CHD1O14646 1710 aa32.58■■■□□ 2.81
CALM1-208ENST00000553995 CCDC88BA6NC98 1476 aa32.57■■■□□ 2.8
CALM1-208ENST00000553995 ARAP1Q96P48 1450 aa32.55■■■□□ 2.8
CALM1-208ENST00000553995 DNMBPQ6XZF7 1577 aa32.53■■■□□ 2.8
CALM1-208ENST00000553995 AQRO60306 1485 aaKnown RBP eCLIP32.48■■■□□ 2.791e-6■■■■□ 26.3
CALM1-208ENST00000553995 TARBP1Q13395 1621 aaKnown RBP32.45■■■□□ 2.79
CALM1-208ENST00000553995 FBLN2P98095 1184 aa32.44■■■□□ 2.78
CALM1-208ENST00000553995 POLA1P09884 1462 aaPredicted RBP32.32■■■□□ 2.76
CALM1-208ENST00000553995 AEBP2Q6ZN18 517 aaPredicted RBP32.23■■■□□ 2.75
CALM1-208ENST00000553995 RAD54L2Q9Y4B4 1467 aa32.18■■■□□ 2.74
CALM1-208ENST00000553995 CLASP1Q7Z460 1538 aa32.18■■■□□ 2.74
CALM1-208ENST00000553995 TDRD9Q8NDG6 1382 aaKnown RBP32.17■■■□□ 2.74
CALM1-208ENST00000553995 SOGA1O94964 1423 aa32.16■■■□□ 2.74
CALM1-208ENST00000553995 SNAPC4Q5SXM2 1469 aa32.15■■■□□ 2.74
CALM1-208ENST00000553995 WDR97A6NE52 1622 aa32.13■■■□□ 2.73
CALM1-208ENST00000553995 SYNJ1O43426 1573 aa32.13■■■□□ 2.73
CALM1-208ENST00000553995 CHMP7Q8WUX9 453 aaPredicted RBP32.09■■■□□ 2.73
CALM1-208ENST00000553995 MAGI1Q96QZ7 1491 aaPredicted RBP32.07■■■□□ 2.72
CALM1-208ENST00000553995 FGD5Q6ZNL6 1462 aa32.01■■■□□ 2.71
CALM1-208ENST00000553995 GRIN2BQ13224 1484 aa31.98■■■□□ 2.71
CALM1-208ENST00000553995 SYNJ2O15056 1496 aa31.96■■■□□ 2.71
CALM1-208ENST00000553995 GAPVD1Q14C86 1478 aa31.9■■■□□ 2.7
CALM1-208ENST00000553995 CUX1P39880 1505 aa31.85■■■□□ 2.69
CALM1-208ENST00000553995 PBRM1Q86U86 1689 aa31.8■■■□□ 2.68
CALM1-208ENST00000553995 ABCA5Q8WWZ7 1642 aa31.63■■■□□ 2.65
CALM1-208ENST00000553995 ABCA10Q8WWZ4 1543 aa31.62■■■□□ 2.65
CALM1-208ENST00000553995 ERCC6L2Q5T890 1561 aa31.59■■■□□ 2.65
CALM1-208ENST00000553995 GRIN2AQ12879 1464 aa31.56■■■□□ 2.64
CALM1-208ENST00000553995 CEP170Q5SW79 1584 aa31.51■■■□□ 2.64
CALM1-208ENST00000553995 NUP160Q12769 1436 aa31.48■■■□□ 2.63
CALM1-208ENST00000553995 ADAMTS12P58397 1594 aa31.45■■■□□ 2.63
CALM1-208ENST00000553995 SHROOM2Q13796 1616 aa31.42■■■□□ 2.62
CALM1-208ENST00000553995 KIF13AQ9H1H9 1805 aa31.41■■■□□ 2.62
CALM1-208ENST00000553995 WRNQ14191 1432 aaPredicted RBP eCLIP31.36■■■□□ 2.61
CALM1-208ENST00000553995 FHAD1B1AJZ9 1412 aa31.33■■■□□ 2.61
CALM1-208ENST00000553995 PRG4Q92954 1404 aaPredicted RBP31.23■■■□□ 2.59
CALM1-208ENST00000553995 ERICH3Q5RHP9 1530 aa31.21■■■□□ 2.59
CALM1-208ENST00000553995 BIVM-ERCC5R4GMW8 1640 aa31.17■■■□□ 2.58
CALM1-208ENST00000553995 TOP2BQ02880 1626 aa31.16■■■□□ 2.58
CALM1-208ENST00000553995 ABCC10Q5T3U5 1492 aa31.16■■■□□ 2.58
CALM1-208ENST00000553995 FAM69CQ0P6D2 419 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms