RNA–Protein interactions for RNA: ENST00000626705.2

CALM1-216, Transcript of calmodulin 1, humanhuman

TSL 5 BASIC

Gene CALM1, Length 1,341 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-216ENST00000626705 NISCHQ9Y2I1 1504 aa37.21■■■■□ 3.55
CALM1-216ENST00000626705 ABCC9O60706 1549 aa34.96■■■■□ 3.19
CALM1-216ENST00000626705 DNAJC5BQ9UF47 199 aa33.88■■■■□ 3.01
CALM1-216ENST00000626705 CCDC180Q9P1Z9 1646 aa33.8■■■■□ 3
CALM1-216ENST00000626705 RB1CC1Q8TDY2 1594 aa32.74■■■□□ 2.83
CALM1-216ENST00000626705 PABPN1Q86U42 306 aaKnown RBP eCLIP32.41■■■□□ 2.78
CALM1-216ENST00000626705 NACADO15069 1562 aa32.27■■■□□ 2.76
CALM1-216ENST00000626705 UNC13AQ9UPW8 1703 aa31.97■■■□□ 2.71
CALM1-216ENST00000626705 DCAF8L2P0C7V8 631 aa31.89■■■□□ 2.7
CALM1-216ENST00000626705 DNAJC5Q9H3Z4 198 aa31.89■■■□□ 2.7
CALM1-216ENST00000626705 BICRAQ9NZM4 1560 aa31.88■■■□□ 2.69
CALM1-216ENST00000626705 CECR2Q9BXF3 1484 aa31.62■■■□□ 2.65
CALM1-216ENST00000626705 CC2D2AQ9P2K1 1620 aa31.51■■■□□ 2.63
CALM1-216ENST00000626705 MYO15BQ96JP2 1530 aa31.47■■■□□ 2.63
CALM1-216ENST00000626705 SHROOM4Q9ULL8 1493 aa31.29■■■□□ 2.6
CALM1-216ENST00000626705 EIF4G1Q04637 1599 aaKnown RBP31.17■■■□□ 2.58
CALM1-216ENST00000626705 SCRIBQ14160 1630 aa30.75■■■□□ 2.51
CALM1-216ENST00000626705 DCAF1Q9Y4B6 1507 aa30.65■■■□□ 2.5
CALM1-216ENST00000626705 ZCCHC6Q5VYS8 1495 aaKnown RBP30.59■■■□□ 2.49
CALM1-216ENST00000626705 CUX2O14529 1486 aa30.57■■■□□ 2.48
CALM1-216ENST00000626705 ERCC6Q03468 1493 aa30.23■■■□□ 2.43
CALM1-216ENST00000626705 TRIM41Q8WV44 630 aa29.98■■■□□ 2.39
CALM1-216ENST00000626705 NCAPD3P42695 1498 aa29.84■■■□□ 2.37
CALM1-216ENST00000626705 NESP48681 1621 aa29.73■■■□□ 2.35
CALM1-216ENST00000626705 THOC2Q8NI27 1593 aaKnown RBP29.61■■■□□ 2.33
CALM1-216ENST00000626705 ATAD2BQ9ULI0 1458 aa29.6■■■□□ 2.33
CALM1-216ENST00000626705 HMGXB3Q12766 1538 aa29.47■■■□□ 2.31
CALM1-216ENST00000626705 SMARCA2P51531 1590 aa29.39■■■□□ 2.3
CALM1-216ENST00000626705 LAMC3Q9Y6N6 1575 aa29.28■■■□□ 2.28
CALM1-216ENST00000626705 KIF21AQ7Z4S6 1674 aa29.24■■■□□ 2.27
CALM1-216ENST00000626705 SMARCA4P51532 1647 aa29.23■■■□□ 2.27
CALM1-216ENST00000626705 BAZ1BQ9UIG0 1483 aaKnown RBP29.2■■■□□ 2.27
CALM1-216ENST00000626705 PDS5BQ9NTI5 1447 aa29.19■■■□□ 2.26
CALM1-216ENST00000626705 BAZ1AQ9NRL2 1556 aaPredicted RBP29.04■■■□□ 2.24
CALM1-216ENST00000626705 OSCARQ8IYS5 282 aa29.02■■■□□ 2.24
CALM1-216ENST00000626705 MRC2Q9UBG0 1479 aa29■■■□□ 2.23
CALM1-216ENST00000626705 PEG3Q9GZU2 1588 aa28.98■■■□□ 2.23
CALM1-216ENST00000626705 WDR62O43379 1518 aa28.96■■■□□ 2.23
CALM1-216ENST00000626705 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
CALM1-216ENST00000626705 RIMBP3CA6NJZ7 1639 aa28.73■■■□□ 2.19
CALM1-216ENST00000626705 RIMBP3BA6NNM3 1639 aa28.73■■■□□ 2.19
CALM1-216ENST00000626705 RIMBP3Q9UFD9 1639 aa28.73■■■□□ 2.19
CALM1-216ENST00000626705 MROH2BQ7Z745 1585 aa28.67■■■□□ 2.18
CALM1-216ENST00000626705 CEP164Q9UPV0 1460 aa28.65■■■□□ 2.18
CALM1-216ENST00000626705 ARHGEF11O15085 1522 aa28.54■■■□□ 2.16
CALM1-216ENST00000626705 FANCD2Q9BXW9 1451 aa28.54■■■□□ 2.16
CALM1-216ENST00000626705 TRHP20396 242 aaPredicted RBP28.43■■■□□ 2.14
CALM1-216ENST00000626705 CYB5RLQ6IPT4 315 aa28.43■■■□□ 2.14
CALM1-216ENST00000626705 AEBP2Q6ZN18 517 aaPredicted RBP28.42■■■□□ 2.14
CALM1-216ENST00000626705 URB2Q14146 1524 aaKnown RBP28.39■■■□□ 2.14
CALM1-216ENST00000626705 CFTRP13569 1480 aa28.32■■■□□ 2.12
CALM1-216ENST00000626705 WIZO95785 1651 aa28.24■■■□□ 2.11
CALM1-216ENST00000626705 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
CALM1-216ENST00000626705 ARAP1Q96P48 1450 aa28.2■■■□□ 2.1
CALM1-216ENST00000626705 IFT140Q96RY7 1462 aa28.13■■■□□ 2.09
CALM1-216ENST00000626705 RSF1Q96T23 1441 aaPredicted RBP28■■■□□ 2.07
CALM1-216ENST00000626705 EIF4G3O43432 1585 aaKnown RBP27.96■■■□□ 2.07
CALM1-216ENST00000626705 CHD1O14646 1710 aa27.94■■■□□ 2.06
CALM1-216ENST00000626705 TOPBP1Q92547 1522 aa27.88■■■□□ 2.05
CALM1-216ENST00000626705 FBLN2P98095 1184 aa27.85■■■□□ 2.05
CALM1-216ENST00000626705 AQRO60306 1485 aaKnown RBP eCLIP27.83■■■□□ 2.051e-6■■■■□ 21.8
CALM1-216ENST00000626705 PRDM2Q13029 1718 aa27.82■■■□□ 2.04
CALM1-216ENST00000626705 TOP2AP11388 1531 aaKnown RBP27.8■■■□□ 2.04
CALM1-216ENST00000626705 ABCC8Q09428 1581 aa27.71■■■□□ 2.03
CALM1-216ENST00000626705 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.03
CALM1-216ENST00000626705 DNMBPQ6XZF7 1577 aa27.65■■■□□ 2.02
CALM1-216ENST00000626705 CLASP1Q7Z460 1538 aa27.64■■■□□ 2.02
CALM1-216ENST00000626705 CCDC88BA6NC98 1476 aa27.54■■■□□ 2
CALM1-216ENST00000626705 POLA1P09884 1462 aaPredicted RBP27.52■■■□□ 2
CALM1-216ENST00000626705 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
CALM1-216ENST00000626705 SYNJ1O43426 1573 aa27.48■■□□□ 1.99
CALM1-216ENST00000626705 SNAPC4Q5SXM2 1469 aa27.48■■□□□ 1.99
CALM1-216ENST00000626705 CHMP7Q8WUX9 453 aaPredicted RBP27.47■■□□□ 1.99
CALM1-216ENST00000626705 RAD54L2Q9Y4B4 1467 aa27.46■■□□□ 1.99
CALM1-216ENST00000626705 GAPVD1Q14C86 1478 aa27.44■■□□□ 1.98
CALM1-216ENST00000626705 ILDR1Q86SU0 546 aaPredicted RBP27.41■■□□□ 1.98
CALM1-216ENST00000626705 SOGA1O94964 1423 aa27.38■■□□□ 1.97
CALM1-216ENST00000626705 MAGI1Q96QZ7 1491 aaPredicted RBP27.36■■□□□ 1.97
CALM1-216ENST00000626705 SYNJ2O15056 1496 aa27.3■■□□□ 1.96
CALM1-216ENST00000626705 WDR97A6NE52 1622 aa27.29■■□□□ 1.96
CALM1-216ENST00000626705 GRIN2BQ13224 1484 aa27.26■■□□□ 1.95
CALM1-216ENST00000626705 FGD5Q6ZNL6 1462 aa27.18■■□□□ 1.94
CALM1-216ENST00000626705 ERCC6L2Q5T890 1561 aa27.16■■□□□ 1.94
CALM1-216ENST00000626705 KIF13AQ9H1H9 1805 aa27.1■■□□□ 1.93
CALM1-216ENST00000626705 KDM4FA0A1W2PPD8 638 aa27.1■■□□□ 1.93
CALM1-216ENST00000626705 PBRM1Q86U86 1689 aa27.01■■□□□ 1.91
CALM1-216ENST00000626705 CUX1P39880 1505 aa26.99■■□□□ 1.91
CALM1-216ENST00000626705 CEP170Q5SW79 1584 aa26.98■■□□□ 1.91
CALM1-216ENST00000626705 GRIN2AQ12879 1464 aa26.9■■□□□ 1.9
CALM1-216ENST00000626705 FAM69CQ0P6D2 419 aa26.9■■□□□ 1.9
CALM1-216ENST00000626705 NUP160Q12769 1436 aa26.88■■□□□ 1.89
CALM1-216ENST00000626705 ABCC10Q5T3U5 1492 aa26.86■■□□□ 1.89
CALM1-216ENST00000626705 SHROOM2Q13796 1616 aa26.86■■□□□ 1.89
CALM1-216ENST00000626705 ABCA5Q8WWZ7 1642 aa26.85■■□□□ 1.89
CALM1-216ENST00000626705 ABCA10Q8WWZ4 1543 aa26.81■■□□□ 1.88
CALM1-216ENST00000626705 KDM6BO15054 1643 aa26.77■■□□□ 1.88
CALM1-216ENST00000626705 ADAMTS12P58397 1594 aa26.73■■□□□ 1.87
CALM1-216ENST00000626705 DIP2BQ9P265 1576 aa26.73■■□□□ 1.87
CALM1-216ENST00000626705 MAPKBP1O60336 1514 aa26.71■■□□□ 1.87
CALM1-216ENST00000626705 PRG4Q92954 1404 aaPredicted RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms