RNA–Protein interactions for RNA: ENST00000544280.6

CALM1-203, Transcript of calmodulin 1, humanhuman

TSL 1 (best) BASIC

Gene CALM1, Length 1,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-203ENST00000544280 NISCHQ9Y2I1 1504 aa56.61■■■■■ 6.65
CALM1-203ENST00000544280 ABCC9O60706 1549 aa51.04■■■■■ 5.76
CALM1-203ENST00000544280 CCDC180Q9P1Z9 1646 aa50.82■■■■■ 5.73
CALM1-203ENST00000544280 RB1CC1Q8TDY2 1594 aa48.44■■■■■ 5.35
CALM1-203ENST00000544280 NACADO15069 1562 aa48.06■■■■■ 5.28
CALM1-203ENST00000544280 DNAJC5BQ9UF47 199 aa48.03■■■■■ 5.28
CALM1-203ENST00000544280 DCAF8L2P0C7V8 631 aa47.87■■■■■ 5.25
CALM1-203ENST00000544280 PABPN1Q86U42 306 aaKnown RBP eCLIP47.52■■■■■ 5.2
CALM1-203ENST00000544280 UNC13AQ9UPW8 1703 aa47.44■■■■■ 5.19
CALM1-203ENST00000544280 MYO15BQ96JP2 1530 aa47.32■■■■■ 5.17
CALM1-203ENST00000544280 BICRAQ9NZM4 1560 aa47.11■■■■■ 5.13
CALM1-203ENST00000544280 ZCCHC6Q5VYS8 1495 aaKnown RBP46.9■■■■■ 5.1
CALM1-203ENST00000544280 DCAF1Q9Y4B6 1507 aa46.69■■■■■ 5.06
CALM1-203ENST00000544280 SCRIBQ14160 1630 aa46.4■■■■■ 5.02
CALM1-203ENST00000544280 SHROOM4Q9ULL8 1493 aa46.31■■■■■ 5
CALM1-203ENST00000544280 CC2D2AQ9P2K1 1620 aa46.08■■■■■ 4.97
CALM1-203ENST00000544280 CECR2Q9BXF3 1484 aa45.95■■■■■ 4.95
CALM1-203ENST00000544280 EIF4G1Q04637 1599 aaKnown RBP45.94■■■■■ 4.94
CALM1-203ENST00000544280 NCAPD3P42695 1498 aa44.39■■■■■ 4.7
CALM1-203ENST00000544280 ATAD2BQ9ULI0 1458 aa44.27■■■■■ 4.68
CALM1-203ENST00000544280 SMARCA4P51532 1647 aa44.21■■■■■ 4.67
CALM1-203ENST00000544280 SMARCA2P51531 1590 aa44.09■■■■■ 4.65
CALM1-203ENST00000544280 DNAJC5Q9H3Z4 198 aa44.09■■■■■ 4.65
CALM1-203ENST00000544280 HMGXB3Q12766 1538 aa44.05■■■■■ 4.64
CALM1-203ENST00000544280 ERCC6Q03468 1493 aa44.02■■■■■ 4.64
CALM1-203ENST00000544280 CUX2O14529 1486 aa43.96■■■■■ 4.63
CALM1-203ENST00000544280 BAZ1AQ9NRL2 1556 aaPredicted RBP43.92■■■■■ 4.62
CALM1-203ENST00000544280 NESP48681 1621 aa43.84■■■■■ 4.61
CALM1-203ENST00000544280 BAZ1BQ9UIG0 1483 aaKnown RBP43.83■■■■■ 4.61
CALM1-203ENST00000544280 PEG3Q9GZU2 1588 aa43.73■■■■■ 4.59
CALM1-203ENST00000544280 MROH2BQ7Z745 1585 aa43.67■■■■■ 4.58
CALM1-203ENST00000544280 LAMC3Q9Y6N6 1575 aa43.41■■■■■ 4.54
CALM1-203ENST00000544280 THOC2Q8NI27 1593 aaKnown RBP43.39■■■■■ 4.54
CALM1-203ENST00000544280 KIF21AQ7Z4S6 1674 aa43.25■■■■■ 4.51
CALM1-203ENST00000544280 WIZO95785 1651 aa43.16■■■■■ 4.5
CALM1-203ENST00000544280 PDS5BQ9NTI5 1447 aa43.14■■■■■ 4.5
CALM1-203ENST00000544280 CADPSQ9ULU8 1353 aa43.03■■■■■ 4.48
CALM1-203ENST00000544280 MRC2Q9UBG0 1479 aa42.82■■■■■ 4.45
CALM1-203ENST00000544280 WDR62O43379 1518 aa42.73■■■■■ 4.43
CALM1-203ENST00000544280 RSF1Q96T23 1441 aaPredicted RBP42.69■■■■■ 4.42
CALM1-203ENST00000544280 CEP164Q9UPV0 1460 aa42.63■■■■■ 4.42
CALM1-203ENST00000544280 FANCD2Q9BXW9 1451 aa42.58■■■■■ 4.41
CALM1-203ENST00000544280 TOP2AP11388 1531 aaKnown RBP42.55■■■■■ 4.4
CALM1-203ENST00000544280 CFTRP13569 1480 aa42.53■■■■■ 4.4
CALM1-203ENST00000544280 URB2Q14146 1524 aaKnown RBP42.28■■■■■ 4.36
CALM1-203ENST00000544280 TRIM41Q8WV44 630 aa42.18■■■■■ 4.34
CALM1-203ENST00000544280 PRDM2Q13029 1718 aa42.11■■■■■ 4.33
CALM1-203ENST00000544280 CCDC88BA6NC98 1476 aa42.09■■■■■ 4.33
CALM1-203ENST00000544280 OSCARQ8IYS5 282 aa41.92■■■■■ 4.3
CALM1-203ENST00000544280 ZNF608Q9ULD9 1512 aaPredicted RBP41.79■■■■■ 4.28
CALM1-203ENST00000544280 TOPBP1Q92547 1522 aa41.77■■■■■ 4.28
CALM1-203ENST00000544280 IFT140Q96RY7 1462 aa41.76■■■■■ 4.28
CALM1-203ENST00000544280 DNMBPQ6XZF7 1577 aa41.59■■■■■ 4.25
CALM1-203ENST00000544280 ABCC8Q09428 1581 aa41.56■■■■■ 4.24
CALM1-203ENST00000544280 EIF4G3O43432 1585 aaKnown RBP41.54■■■■■ 4.24
CALM1-203ENST00000544280 RIMBP3CA6NJZ7 1639 aa41.47■■■■■ 4.23
CALM1-203ENST00000544280 RIMBP3BA6NNM3 1639 aa41.47■■■■■ 4.23
CALM1-203ENST00000544280 RIMBP3Q9UFD9 1639 aa41.47■■■■■ 4.23
CALM1-203ENST00000544280 TARBP1Q13395 1621 aaKnown RBP41.42■■■■■ 4.22
CALM1-203ENST00000544280 AQRO60306 1485 aaKnown RBP eCLIP41.38■■■■■ 4.211e-6■■■■□ 21.8
CALM1-203ENST00000544280 POLA1P09884 1462 aaPredicted RBP41.34■■■■■ 4.21
CALM1-203ENST00000544280 ARHGEF11O15085 1522 aa41.31■■■■■ 4.2
CALM1-203ENST00000544280 CHD1O14646 1710 aa41.27■■■■■ 4.2
CALM1-203ENST00000544280 RAD54L2Q9Y4B4 1467 aa41.23■■■■■ 4.19
CALM1-203ENST00000544280 SOGA1O94964 1423 aa41.12■■■■■ 4.17
CALM1-203ENST00000544280 FBLN2P98095 1184 aa41.11■■■■■ 4.17
CALM1-203ENST00000544280 TDRD9Q8NDG6 1382 aaKnown RBP41.1■■■■■ 4.17
CALM1-203ENST00000544280 FGD5Q6ZNL6 1462 aa41.08■■■■■ 4.17
CALM1-203ENST00000544280 CUX1P39880 1505 aa41.03■■■■■ 4.16
CALM1-203ENST00000544280 CYB5RLQ6IPT4 315 aa41.01■■■■■ 4.16
CALM1-203ENST00000544280 SNAPC4Q5SXM2 1469 aa40.96■■■■■ 4.15
CALM1-203ENST00000544280 ARAP1Q96P48 1450 aa40.92■■■■■ 4.14
CALM1-203ENST00000544280 WDR97A6NE52 1622 aa40.89■■■■■ 4.14
CALM1-203ENST00000544280 GRIN2BQ13224 1484 aa40.77■■■■■ 4.12
CALM1-203ENST00000544280 MAGI1Q96QZ7 1491 aaPredicted RBP40.77■■■■■ 4.12
CALM1-203ENST00000544280 CLASP1Q7Z460 1538 aa40.76■■■■■ 4.12
CALM1-203ENST00000544280 CHMP7Q8WUX9 453 aaPredicted RBP40.75■■■■■ 4.11
CALM1-203ENST00000544280 SUPT5HO00267 1087 aaKnown RBP40.74■■■■■ 4.11
CALM1-203ENST00000544280 SYNJ1O43426 1573 aa40.69■■■■■ 4.1
CALM1-203ENST00000544280 PBRM1Q86U86 1689 aa40.66■■■■■ 4.1
CALM1-203ENST00000544280 SYNJ2O15056 1496 aa40.65■■■■■ 4.1
CALM1-203ENST00000544280 GAPVD1Q14C86 1478 aa40.63■■■■■ 4.09
CALM1-203ENST00000544280 TRHP20396 242 aaPredicted RBP40.59■■■■■ 4.09
CALM1-203ENST00000544280 ABCA10Q8WWZ4 1543 aa40.56■■■■■ 4.08
CALM1-203ENST00000544280 ABCA5Q8WWZ7 1642 aa40.55■■■■■ 4.08
CALM1-203ENST00000544280 WRNQ14191 1432 aaPredicted RBP eCLIP40.35■■■■■ 4.05
CALM1-203ENST00000544280 BIVM-ERCC5R4GMW8 1640 aa40.31■■■■■ 4.04
CALM1-203ENST00000544280 TOP2BQ02880 1626 aa40.3■■■■■ 4.04
CALM1-203ENST00000544280 GRIN2AQ12879 1464 aa40.27■■■■■ 4.04
CALM1-203ENST00000544280 ADAMTS12P58397 1594 aa40.26■■■■■ 4.04
CALM1-203ENST00000544280 ERCC6L2Q5T890 1561 aa40.19■■■■■ 4.02
CALM1-203ENST00000544280 CEP170Q5SW79 1584 aa40.18■■■■■ 4.02
CALM1-203ENST00000544280 NUP160Q12769 1436 aa40.14■■■■■ 4.02
CALM1-203ENST00000544280 FHAD1B1AJZ9 1412 aa40.08■■■■■ 4.01
CALM1-203ENST00000544280 ERICH3Q5RHP9 1530 aa40.03■■■■■ 4
CALM1-203ENST00000544280 SHROOM2Q13796 1616 aa39.98■■■■□ 3.99
CALM1-203ENST00000544280 PRG4Q92954 1404 aaPredicted RBP39.77■■■■□ 3.96
CALM1-203ENST00000544280 JPH4Q96JJ6 628 aa39.7■■■■□ 3.95
CALM1-203ENST00000544280 RUSC2Q8N2Y8 1516 aa39.7■■■■□ 3.95
CALM1-203ENST00000544280 KIF13AQ9H1H9 1805 aa39.53■■■■□ 3.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms