RNA–Protein interactions for RNA: ENST00000356978.8

CALM1-201, Transcript of calmodulin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALM1, Length 4,242 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-201ENST00000356978 NISCHQ9Y2I1 1504 aa22.84■■□□□ 1.25
CALM1-201ENST00000356978 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
CALM1-201ENST00000356978 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1.01
CALM1-201ENST00000356978 SHROOM4Q9ULL8 1493 aa21.29■■□□□ 1
CALM1-201ENST00000356978 EHMT2Q96KQ7 1210 aa20.28■□□□□ 0.84
CALM1-201ENST00000356978 PCGF6Q9BYE7 350 aa20.11■□□□□ 0.81
CALM1-201ENST00000356978 FAM9AQ8IZU1 332 aaPredicted RBP19.98■□□□□ 0.79
CALM1-201ENST00000356978 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
CALM1-201ENST00000356978 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
CALM1-201ENST00000356978 LOC105371045A0A1W2PR82 267 aa19.6■□□□□ 0.73
CALM1-201ENST00000356978 TTBK1Q5TCY1 1321 aaPredicted RBP19.58■□□□□ 0.72
CALM1-201ENST00000356978 HRCP23327 699 aa19.45■□□□□ 0.7
CALM1-201ENST00000356978 PPARGC1BQ86YN6 1023 aaKnown RBP19.41■□□□□ 0.7
CALM1-201ENST00000356978 TRIM26Q12899 539 aaPredicted RBP19.26■□□□□ 0.67
CALM1-201ENST00000356978 RANGAP1P46060 587 aaPredicted RBP19.21■□□□□ 0.67
CALM1-201ENST00000356978 CCER1Q8TC90 406 aaPredicted RBP19.19■□□□□ 0.66
CALM1-201ENST00000356978 ZEB1P37275 1124 aaPredicted RBP19.18■□□□□ 0.66
CALM1-201ENST00000356978 APLP2Q06481 763 aa19.16■□□□□ 0.66
CALM1-201ENST00000356978 UBTFP17480 764 aaKnown RBP19.11■□□□□ 0.65
CALM1-201ENST00000356978 ZCCHC6Q5VYS8 1495 aaKnown RBP19.08■□□□□ 0.64
CALM1-201ENST00000356978 YTHDC1Q96MU7 727 aaKnown RBP18.93■□□□□ 0.62
CALM1-201ENST00000356978 ABCC9O60706 1549 aa18.91■□□□□ 0.62
CALM1-201ENST00000356978 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
CALM1-201ENST00000356978 CENPBP07199 599 aaPredicted RBP18.84■□□□□ 0.61
CALM1-201ENST00000356978 MYO15BQ96JP2 1530 aa18.81■□□□□ 0.6
CALM1-201ENST00000356978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.8■□□□□ 0.6
CALM1-201ENST00000356978 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.59
CALM1-201ENST00000356978 ATP1B4Q9UN42 357 aaPredicted RBP18.66■□□□□ 0.58
CALM1-201ENST00000356978 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
CALM1-201ENST00000356978 PABPN1Q86U42 306 aaKnown RBP eCLIP18.65■□□□□ 0.58
CALM1-201ENST00000356978 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
CALM1-201ENST00000356978 ITGAEP38570 1179 aa18.5■□□□□ 0.55
CALM1-201ENST00000356978 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
CALM1-201ENST00000356978 DIEXFQ68CQ4 756 aaKnown RBP18.44■□□□□ 0.54
CALM1-201ENST00000356978 RSF1Q96T23 1441 aaPredicted RBP18.36■□□□□ 0.53
CALM1-201ENST00000356978 GTF3C3Q9Y5Q9 886 aa18.34■□□□□ 0.53
CALM1-201ENST00000356978 CSRNP3Q8WYN3 585 aa18.3■□□□□ 0.52
CALM1-201ENST00000356978 MYT1Q01538 1121 aa18.2■□□□□ 0.5
CALM1-201ENST00000356978 ERICH6Q7L0X2 663 aa18.16■□□□□ 0.5
CALM1-201ENST00000356978 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
CALM1-201ENST00000356978 ZNF316A6NFI3 1004 aaPredicted RBP18.09■□□□□ 0.49
CALM1-201ENST00000356978 CECR2Q9BXF3 1484 aa18.08■□□□□ 0.48
CALM1-201ENST00000356978 ACIN1Q9UKV3 1341 aaKnown RBP18.08■□□□□ 0.48
CALM1-201ENST00000356978 NEFLP07196 543 aa18.03■□□□□ 0.48
CALM1-201ENST00000356978 FAM50AQ14320 339 aaKnown RBP18.02■□□□□ 0.48
CALM1-201ENST00000356978 NEUROD1Q13562 356 aa18.01■□□□□ 0.47
CALM1-201ENST00000356978 RB1CC1Q8TDY2 1594 aa17.97■□□□□ 0.47
CALM1-201ENST00000356978 BCANQ96GW7 911 aa17.96■□□□□ 0.47
CALM1-201ENST00000356978 P3H3Q8IVL6 736 aa17.92■□□□□ 0.46
CALM1-201ENST00000356978 CNGB1Q14028 1251 aaPredicted RBP17.87■□□□□ 0.45
CALM1-201ENST00000356978 NACADO15069 1562 aa17.87■□□□□ 0.45
CALM1-201ENST00000356978 CEP162Q5TB80 1403 aa17.86■□□□□ 0.45
CALM1-201ENST00000356978 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
CALM1-201ENST00000356978 POLR3GLQ9BT43 218 aa17.82■□□□□ 0.44
CALM1-201ENST00000356978 CLIP1P30622 1438 aa17.75■□□□□ 0.43
CALM1-201ENST00000356978 SOGA1O94964 1423 aa17.74■□□□□ 0.43
CALM1-201ENST00000356978 MIER1Q8N108 512 aa17.74■□□□□ 0.43
CALM1-201ENST00000356978 WRNQ14191 1432 aaPredicted RBP eCLIP17.71■□□□□ 0.43
CALM1-201ENST00000356978 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
CALM1-201ENST00000356978 TRIM52Q96A61 297 aa17.7■□□□□ 0.42
CALM1-201ENST00000356978 TNIKQ9UKE5 1360 aa17.69■□□□□ 0.42
CALM1-201ENST00000356978 ABCC8Q09428 1581 aa17.68■□□□□ 0.42
CALM1-201ENST00000356978 GOLGA3Q08378 1498 aa17.67■□□□□ 0.42
CALM1-201ENST00000356978 ARID3CA6NKF2 412 aa17.66■□□□□ 0.42
CALM1-201ENST00000356978 WIZO95785 1651 aa17.66■□□□□ 0.42
CALM1-201ENST00000356978 CCDC88BA6NC98 1476 aa17.65■□□□□ 0.42
CALM1-201ENST00000356978 EEA1Q15075 1411 aa17.64■□□□□ 0.41
CALM1-201ENST00000356978 ANP32CO43423 234 aa17.58■□□□□ 0.4
CALM1-201ENST00000356978 DDX10Q13206 875 aaKnown RBP17.57■□□□□ 0.4
CALM1-201ENST00000356978 HIRIP3Q9BW71 556 aaPredicted RBP17.53■□□□□ 0.4
CALM1-201ENST00000356978 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
CALM1-201ENST00000356978 CEP164Q9UPV0 1460 aa17.51■□□□□ 0.39
CALM1-201ENST00000356978 ZNF326Q5BKZ1 582 aaKnown RBP17.49■□□□□ 0.39
CALM1-201ENST00000356978 FBLN2P98095 1184 aa17.44■□□□□ 0.38
CALM1-201ENST00000356978 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
CALM1-201ENST00000356978 CHIC2Q9UKJ5 165 aa17.41■□□□□ 0.38
CALM1-201ENST00000356978 FKBP8Q14318 412 aa17.4■□□□□ 0.38
CALM1-201ENST00000356978 MYT1LQ9UL68 1186 aa17.39■□□□□ 0.37
CALM1-201ENST00000356978 TONSLQ96HA7 1378 aa17.38■□□□□ 0.37
CALM1-201ENST00000356978 KANK4Q5T7N3 995 aaPredicted RBP17.36■□□□□ 0.37
CALM1-201ENST00000356978 TOP2AP11388 1531 aaKnown RBP17.35■□□□□ 0.37
CALM1-201ENST00000356978 KIF27Q86VH2 1401 aa17.34■□□□□ 0.37
CALM1-201ENST00000356978 ZNF777Q9ULD5 760 aaPredicted RBP17.33■□□□□ 0.36
CALM1-201ENST00000356978 SIN3AQ96ST3 1273 aa17.32■□□□□ 0.36
CALM1-201ENST00000356978 VPS8Q8N3P4 1428 aa17.31■□□□□ 0.36
CALM1-201ENST00000356978 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
CALM1-201ENST00000356978 HNRNPUQ00839 825 aaKnown RBP eCLIP17.28■□□□□ 0.36
CALM1-201ENST00000356978 RRP7BPQ9NSQ0 103 aa17.24■□□□□ 0.35
CALM1-201ENST00000356978 SMARCA4P51532 1647 aa17.24■□□□□ 0.35
CALM1-201ENST00000356978 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
CALM1-201ENST00000356978 RTL5Q5HYW3 569 aaPredicted RBP17.23■□□□□ 0.35
CALM1-201ENST00000356978 CCNB3Q8WWL7 1395 aa17.22■□□□□ 0.35
CALM1-201ENST00000356978 IRX6P78412 446 aaPredicted RBP17.21■□□□□ 0.35
CALM1-201ENST00000356978 RAPGEF2Q9Y4G8 1499 aa17.21■□□□□ 0.35
CALM1-201ENST00000356978 FAM9BQ8IZU0 186 aa17.21■□□□□ 0.35
CALM1-201ENST00000356978 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
CALM1-201ENST00000356978 DAXXQ9UER7 740 aaPredicted RBP17.17■□□□□ 0.34
CALM1-201ENST00000356978 CUX2O14529 1486 aa17.16■□□□□ 0.34
CALM1-201ENST00000356978 CARMIL1Q5VZK9 1371 aa17.14■□□□□ 0.33
CALM1-201ENST00000356978 SMARCA2P51531 1590 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms