RNA–Protein interactions for RNA: ENST00000541252.1

FERMT3-205, Transcript of fermitin family member 3, humanhuman

TSL 3

Gene FERMT3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-205ENST00000541252 NISCHQ9Y2I1 1504 aa40.6■■■■■ 4.09
FERMT3-205ENST00000541252 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.42
FERMT3-205ENST00000541252 ABCC9O60706 1549 aa36.39■■■■□ 3.42
FERMT3-205ENST00000541252 RB1CC1Q8TDY2 1594 aa34.71■■■■□ 3.15
FERMT3-205ENST00000541252 NACADO15069 1562 aa34.49■■■■□ 3.11
FERMT3-205ENST00000541252 DCAF8L2P0C7V8 631 aa34.24■■■■□ 3.07
FERMT3-205ENST00000541252 DNAJC5BQ9UF47 199 aa34.17■■■■□ 3.06
FERMT3-205ENST00000541252 MYO15BQ96JP2 1530 aa34.07■■■■□ 3.04
FERMT3-205ENST00000541252 PABPN1Q86U42 306 aaKnown RBP eCLIP33.88■■■■□ 3.01
FERMT3-205ENST00000541252 UNC13AQ9UPW8 1703 aa33.82■■■■□ 3
FERMT3-205ENST00000541252 BICRAQ9NZM4 1560 aa33.64■■■□□ 2.98
FERMT3-205ENST00000541252 ZCCHC6Q5VYS8 1495 aaKnown RBP33.63■■■□□ 2.97
FERMT3-205ENST00000541252 DCAF1Q9Y4B6 1507 aa33.6■■■□□ 2.97
FERMT3-205ENST00000541252 SHROOM4Q9ULL8 1493 aa33.33■■■□□ 2.93
FERMT3-205ENST00000541252 SCRIBQ14160 1630 aa33.11■■■□□ 2.89
FERMT3-205ENST00000541252 CC2D2AQ9P2K1 1620 aa32.89■■■□□ 2.86
FERMT3-205ENST00000541252 EIF4G1Q04637 1599 aaKnown RBP32.83■■■□□ 2.85
FERMT3-205ENST00000541252 CECR2Q9BXF3 1484 aa32.83■■■□□ 2.85
FERMT3-205ENST00000541252 NCAPD3P42695 1498 aa31.86■■■□□ 2.69
FERMT3-205ENST00000541252 ATAD2BQ9ULI0 1458 aa31.71■■■□□ 2.67
FERMT3-205ENST00000541252 SMARCA2P51531 1590 aa31.65■■■□□ 2.66
FERMT3-205ENST00000541252 SMARCA4P51532 1647 aa31.64■■■□□ 2.66
FERMT3-205ENST00000541252 HMGXB3Q12766 1538 aa31.59■■■□□ 2.65
FERMT3-205ENST00000541252 BAZ1AQ9NRL2 1556 aaPredicted RBP31.53■■■□□ 2.64
FERMT3-205ENST00000541252 DNAJC5Q9H3Z4 198 aa31.49■■■□□ 2.63
FERMT3-205ENST00000541252 CUX2O14529 1486 aa31.47■■■□□ 2.63
FERMT3-205ENST00000541252 ERCC6Q03468 1493 aa31.46■■■□□ 2.63
FERMT3-205ENST00000541252 BAZ1BQ9UIG0 1483 aaKnown RBP31.4■■■□□ 2.62
FERMT3-205ENST00000541252 PEG3Q9GZU2 1588 aa31.39■■■□□ 2.62
FERMT3-205ENST00000541252 NESP48681 1621 aa31.24■■■□□ 2.59
FERMT3-205ENST00000541252 MROH2BQ7Z745 1585 aa31.23■■■□□ 2.59
FERMT3-205ENST00000541252 LAMC3Q9Y6N6 1575 aa31.11■■■□□ 2.57
FERMT3-205ENST00000541252 PDS5BQ9NTI5 1447 aa30.97■■■□□ 2.55
FERMT3-205ENST00000541252 THOC2Q8NI27 1593 aaKnown RBP30.95■■■□□ 2.54
FERMT3-205ENST00000541252 CADPSQ9ULU8 1353 aa30.88■■■□□ 2.53
FERMT3-205ENST00000541252 WIZO95785 1651 aa30.83■■■□□ 2.53
FERMT3-205ENST00000541252 KIF21AQ7Z4S6 1674 aa30.83■■■□□ 2.53
FERMT3-205ENST00000541252 MRC2Q9UBG0 1479 aa30.64■■■□□ 2.5
FERMT3-205ENST00000541252 RSF1Q96T23 1441 aaPredicted RBP30.62■■■□□ 2.49
FERMT3-205ENST00000541252 WDR62O43379 1518 aa30.57■■■□□ 2.48
FERMT3-205ENST00000541252 CEP164Q9UPV0 1460 aa30.52■■■□□ 2.48
FERMT3-205ENST00000541252 CFTRP13569 1480 aa30.51■■■□□ 2.48
FERMT3-205ENST00000541252 TOP2AP11388 1531 aaKnown RBP30.49■■■□□ 2.47
FERMT3-205ENST00000541252 FANCD2Q9BXW9 1451 aa30.48■■■□□ 2.47
FERMT3-205ENST00000541252 URB2Q14146 1524 aaKnown RBP30.21■■■□□ 2.43
FERMT3-205ENST00000541252 CCDC88BA6NC98 1476 aa30.15■■■□□ 2.42
FERMT3-205ENST00000541252 PRDM2Q13029 1718 aa30.14■■■□□ 2.42
FERMT3-205ENST00000541252 OSCARQ8IYS5 282 aa30.06■■■□□ 2.4
FERMT3-205ENST00000541252 TRIM41Q8WV44 630 aa29.99■■■□□ 2.39
FERMT3-205ENST00000541252 IFT140Q96RY7 1462 aa29.94■■■□□ 2.38
FERMT3-205ENST00000541252 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
FERMT3-205ENST00000541252 TOPBP1Q92547 1522 aa29.9■■■□□ 2.38
FERMT3-205ENST00000541252 ZNF608Q9ULD9 1512 aaPredicted RBP29.81■■■□□ 2.36
FERMT3-205ENST00000541252 DNMBPQ6XZF7 1577 aa29.79■■■□□ 2.36
FERMT3-205ENST00000541252 EIF4G3O43432 1585 aaKnown RBP29.64■■■□□ 2.34
FERMT3-205ENST00000541252 TARBP1Q13395 1621 aaKnown RBP29.63■■■□□ 2.33
FERMT3-205ENST00000541252 POLA1P09884 1462 aaPredicted RBP29.59■■■□□ 2.33
FERMT3-205ENST00000541252 AQRO60306 1485 aaKnown RBP eCLIP29.57■■■□□ 2.324e-7■■■■□ 24.7
FERMT3-205ENST00000541252 RIMBP3CA6NJZ7 1639 aa29.56■■■□□ 2.32
FERMT3-205ENST00000541252 RIMBP3BA6NNM3 1639 aa29.56■■■□□ 2.32
FERMT3-205ENST00000541252 RIMBP3Q9UFD9 1639 aa29.56■■■□□ 2.32
FERMT3-205ENST00000541252 ARHGEF11O15085 1522 aa29.49■■■□□ 2.31
FERMT3-205ENST00000541252 SOGA1O94964 1423 aa29.48■■■□□ 2.31
FERMT3-205ENST00000541252 RAD54L2Q9Y4B4 1467 aa29.44■■■□□ 2.3
FERMT3-205ENST00000541252 CHD1O14646 1710 aa29.42■■■□□ 2.3
FERMT3-205ENST00000541252 WDR97A6NE52 1622 aa29.41■■■□□ 2.3
FERMT3-205ENST00000541252 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.3
FERMT3-205ENST00000541252 FBLN2P98095 1184 aa29.39■■■□□ 2.3
FERMT3-205ENST00000541252 FGD5Q6ZNL6 1462 aa29.38■■■□□ 2.29
FERMT3-205ENST00000541252 CUX1P39880 1505 aa29.35■■■□□ 2.29
FERMT3-205ENST00000541252 CYB5RLQ6IPT4 315 aa29.3■■■□□ 2.28
FERMT3-205ENST00000541252 SNAPC4Q5SXM2 1469 aa29.26■■■□□ 2.27
FERMT3-205ENST00000541252 MAGI1Q96QZ7 1491 aaPredicted RBP29.25■■■□□ 2.27
FERMT3-205ENST00000541252 GRIN2BQ13224 1484 aa29.23■■■□□ 2.27
FERMT3-205ENST00000541252 CHMP7Q8WUX9 453 aaPredicted RBP29.22■■■□□ 2.27
FERMT3-205ENST00000541252 SUPT5HO00267 1087 aaKnown RBP29.2■■■□□ 2.26
FERMT3-205ENST00000541252 ARAP1Q96P48 1450 aa29.18■■■□□ 2.26
FERMT3-205ENST00000541252 SYNJ2O15056 1496 aa29.14■■■□□ 2.26
FERMT3-205ENST00000541252 SYNJ1O43426 1573 aa29.13■■■□□ 2.25
FERMT3-205ENST00000541252 CLASP1Q7Z460 1538 aa29.13■■■□□ 2.25
FERMT3-205ENST00000541252 GAPVD1Q14C86 1478 aa29.12■■■□□ 2.25
FERMT3-205ENST00000541252 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
FERMT3-205ENST00000541252 PBRM1Q86U86 1689 aa29.04■■■□□ 2.24
FERMT3-205ENST00000541252 ABCA5Q8WWZ7 1642 aa29.02■■■□□ 2.24
FERMT3-205ENST00000541252 WRNQ14191 1432 aaPredicted RBP eCLIP29■■■□□ 2.23
FERMT3-205ENST00000541252 TRHP20396 242 aaPredicted RBP28.96■■■□□ 2.23
FERMT3-205ENST00000541252 TOP2BQ02880 1626 aa28.91■■■□□ 2.22
FERMT3-205ENST00000541252 BIVM-ERCC5R4GMW8 1640 aa28.9■■■□□ 2.22
FERMT3-205ENST00000541252 GRIN2AQ12879 1464 aa28.84■■■□□ 2.21
FERMT3-205ENST00000541252 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
FERMT3-205ENST00000541252 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
FERMT3-205ENST00000541252 NUP160Q12769 1436 aa28.76■■■□□ 2.19
FERMT3-205ENST00000541252 ERICH3Q5RHP9 1530 aa28.74■■■□□ 2.19
FERMT3-205ENST00000541252 CEP170Q5SW79 1584 aa28.69■■■□□ 2.18
FERMT3-205ENST00000541252 SHROOM2Q13796 1616 aa28.61■■■□□ 2.17
FERMT3-205ENST00000541252 ERCC6L2Q5T890 1561 aa28.61■■■□□ 2.17
FERMT3-205ENST00000541252 JPH4Q96JJ6 628 aa28.49■■■□□ 2.15
FERMT3-205ENST00000541252 PRG4Q92954 1404 aaPredicted RBP28.47■■■□□ 2.15
FERMT3-205ENST00000541252 KIF27Q86VH2 1401 aa28.38■■■□□ 2.13
FERMT3-205ENST00000541252 RUSC2Q8N2Y8 1516 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms