RNA–Protein interactions for RNA: ENST00000336053.10

HNRNPC-201, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2 BASIC

Gene HNRNPC, Length 3,301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-201ENST00000336053 NISCHQ9Y2I1 1504 aa16.38■□□□□ 0.21
HNRNPC-201ENST00000336053 HRCP23327 699 aa14.94□□□□□ -0.02
HNRNPC-201ENST00000336053 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
HNRNPC-201ENST00000336053 PELP1Q8IZL8 1130 aaKnown RBP14.84□□□□□ -0.03
HNRNPC-201ENST00000336053 PCGF6Q9BYE7 350 aa14.82□□□□□ -0.04
HNRNPC-201ENST00000336053 SUPT5HO00267 1087 aaKnown RBP14.6□□□□□ -0.07
HNRNPC-201ENST00000336053 SHROOM4Q9ULL8 1493 aa14.43□□□□□ -0.1
HNRNPC-201ENST00000336053 SCAF1Q9H7N4 1312 aaKnown RBP14.38□□□□□ -0.11
HNRNPC-201ENST00000336053 MYT1Q01538 1121 aa14.31□□□□□ -0.12
HNRNPC-201ENST00000336053 CHIC1Q5VXU3 224 aa14.07□□□□□ -0.16
HNRNPC-201ENST00000336053 LOC105371045A0A1W2PR82 267 aa14.04□□□□□ -0.16
HNRNPC-201ENST00000336053 MYO15BQ96JP2 1530 aa14.02□□□□□ -0.17
HNRNPC-201ENST00000336053 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
HNRNPC-201ENST00000336053 TRIM26Q12899 539 aaPredicted RBP13.98□□□□□ -0.17
HNRNPC-201ENST00000336053 NEUROD1Q13562 356 aa13.95□□□□□ -0.18
HNRNPC-201ENST00000336053 ZCCHC6Q5VYS8 1495 aaKnown RBP13.95□□□□□ -0.18
HNRNPC-201ENST00000336053 CCDC180Q9P1Z9 1646 aa13.94□□□□□ -0.18
HNRNPC-201ENST00000336053 ACIN1Q9UKV3 1341 aaKnown RBP13.93□□□□□ -0.18
HNRNPC-201ENST00000336053 ZEB1P37275 1124 aaPredicted RBP13.93□□□□□ -0.18
HNRNPC-201ENST00000336053 CENPBP07199 599 aaPredicted RBP13.86□□□□□ -0.19
HNRNPC-201ENST00000336053 EHMT2Q96KQ7 1210 aa13.84□□□□□ -0.19
HNRNPC-201ENST00000336053 YTHDC1Q96MU7 727 aaKnown RBP13.79□□□□□ -0.2
HNRNPC-201ENST00000336053 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
HNRNPC-201ENST00000336053 DIEXFQ68CQ4 756 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-201ENST00000336053 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
HNRNPC-201ENST00000336053 CCER1Q8TC90 406 aaPredicted RBP13.63□□□□□ -0.23
HNRNPC-201ENST00000336053 FAM9AQ8IZU1 332 aaPredicted RBP13.63□□□□□ -0.23
HNRNPC-201ENST00000336053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
HNRNPC-201ENST00000336053 BCL11AQ9H165 835 aa13.56□□□□□ -0.24
HNRNPC-201ENST00000336053 TTBK1Q5TCY1 1321 aaPredicted RBP13.51□□□□□ -0.25
HNRNPC-201ENST00000336053 ANP32EQ9BTT0 268 aa13.31□□□□□ -0.28
HNRNPC-201ENST00000336053 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
HNRNPC-201ENST00000336053 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
HNRNPC-201ENST00000336053 MIER1Q8N108 512 aa13.25□□□□□ -0.29
HNRNPC-201ENST00000336053 ABCC9O60706 1549 aa13.23□□□□□ -0.29
HNRNPC-201ENST00000336053 ZNF316A6NFI3 1004 aaPredicted RBP13.21□□□□□ -0.29
HNRNPC-201ENST00000336053 BCANQ96GW7 911 aa13.18□□□□□ -0.3
HNRNPC-201ENST00000336053 PRKCSHP14314 528 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-201ENST00000336053 TSHZ2Q9NRE2 1034 aa13.11□□□□□ -0.31
HNRNPC-201ENST00000336053 SUPT16HQ9Y5B9 1047 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-201ENST00000336053 RSF1Q96T23 1441 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-201ENST00000336053 ERICH6Q7L0X2 663 aa13□□□□□ -0.33
HNRNPC-201ENST00000336053 RB1CC1Q8TDY2 1594 aa12.97□□□□□ -0.33
HNRNPC-201ENST00000336053 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-201ENST00000336053 SCRIBQ14160 1630 aa12.93□□□□□ -0.34
HNRNPC-201ENST00000336053 ITGAEP38570 1179 aa12.89□□□□□ -0.35
HNRNPC-201ENST00000336053 FKBP8Q14318 412 aa12.89□□□□□ -0.35
HNRNPC-201ENST00000336053 RBM19Q9Y4C8 960 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-201ENST00000336053 NEFLP07196 543 aa12.83□□□□□ -0.36
HNRNPC-201ENST00000336053 EIF4G1Q04637 1599 aaKnown RBP12.8□□□□□ -0.36
HNRNPC-201ENST00000336053 CLSPNQ9HAW4 1339 aa12.79□□□□□ -0.36
HNRNPC-201ENST00000336053 ANO8Q9HCE9 1232 aaPredicted RBP12.78□□□□□ -0.36
HNRNPC-201ENST00000336053 NACADO15069 1562 aa12.73□□□□□ -0.37
HNRNPC-201ENST00000336053 MROH2BQ7Z745 1585 aa12.73□□□□□ -0.37
HNRNPC-201ENST00000336053 UBTFP17480 764 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-201ENST00000336053 KCNH8Q96L42 1107 aa12.72□□□□□ -0.37
HNRNPC-201ENST00000336053 CCDC136Q96JN2 1154 aa12.71□□□□□ -0.38
HNRNPC-201ENST00000336053 CECR2Q9BXF3 1484 aa12.71□□□□□ -0.38
HNRNPC-201ENST00000336053 RANGAP1P46060 587 aaPredicted RBP12.7□□□□□ -0.38
HNRNPC-201ENST00000336053 WIZO95785 1651 aa12.7□□□□□ -0.38
HNRNPC-201ENST00000336053 BAZ1AQ9NRL2 1556 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-201ENST00000336053 DEKP35659 375 aaKnown RBP12.68□□□□□ -0.38
HNRNPC-201ENST00000336053 NBR1Q14596 966 aa12.68□□□□□ -0.38
HNRNPC-201ENST00000336053 MSH5O43196 834 aa12.67□□□□□ -0.38
HNRNPC-201ENST00000336053 TRIM52Q96A61 297 aa12.65□□□□□ -0.38
HNRNPC-201ENST00000336053 RTN4Q9NQC3 1192 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-201ENST00000336053 IRX6P78412 446 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-201ENST00000336053 APLP2Q06481 763 aa12.61□□□□□ -0.39
HNRNPC-201ENST00000336053 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-201ENST00000336053 SALL2Q9Y467 1007 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-201ENST00000336053 CDK11AQ9UQ88 783 aaPredicted RBP12.6□□□□□ -0.39
HNRNPC-201ENST00000336053 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
HNRNPC-201ENST00000336053 DDX10Q13206 875 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-201ENST00000336053 EIF5BO60841 1220 aaKnown RBP12.52□□□□□ -0.4
HNRNPC-201ENST00000336053 TOP2AP11388 1531 aaKnown RBP12.52□□□□□ -0.41
HNRNPC-201ENST00000336053 RTL5Q5HYW3 569 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-201ENST00000336053 HIRIP3Q9BW71 556 aaPredicted RBP12.47□□□□□ -0.41
HNRNPC-201ENST00000336053 SMARCA2P51531 1590 aa12.47□□□□□ -0.41
HNRNPC-201ENST00000336053 SMARCA4P51532 1647 aa12.46□□□□□ -0.42
HNRNPC-201ENST00000336053 MYT1LQ9UL68 1186 aa12.45□□□□□ -0.42
HNRNPC-201ENST00000336053 UNC13AQ9UPW8 1703 aa12.45□□□□□ -0.42
HNRNPC-201ENST00000336053 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
HNRNPC-201ENST00000336053 CEP162Q5TB80 1403 aa12.44□□□□□ -0.42
HNRNPC-201ENST00000336053 IL27Q8NEV9 243 aa12.43□□□□□ -0.42
HNRNPC-201ENST00000336053 CCDC88BA6NC98 1476 aa12.43□□□□□ -0.42
HNRNPC-201ENST00000336053 FANCIQ9NVI1 1328 aa12.4□□□□□ -0.42
HNRNPC-201ENST00000336053 TNIKQ9UKE5 1360 aa12.37□□□□□ -0.43
HNRNPC-201ENST00000336053 ANP32CO43423 234 aa12.36□□□□□ -0.43
HNRNPC-201ENST00000336053 NOP58Q9Y2X3 529 aaKnown RBP12.36□□□□□ -0.43
HNRNPC-201ENST00000336053 HNRNPUQ00839 825 aaKnown RBP eCLIP12.36□□□□□ -0.43
HNRNPC-201ENST00000336053 EEA1Q15075 1411 aa12.34□□□□□ -0.43
HNRNPC-201ENST00000336053 PAK3O75914 559 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-201ENST00000336053 B4GALNT3Q6L9W6 998 aa12.34□□□□□ -0.43
HNRNPC-201ENST00000336053 SOGA1O94964 1423 aa12.33□□□□□ -0.44
HNRNPC-201ENST00000336053 NPM2Q86SE8 214 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-201ENST00000336053 PEG3Q9GZU2 1588 aa12.29□□□□□ -0.44
HNRNPC-201ENST00000336053 RUSC2Q8N2Y8 1516 aa12.29□□□□□ -0.44
HNRNPC-201ENST00000336053 ERICH6BQ5W0A0 696 aa12.28□□□□□ -0.44
HNRNPC-201ENST00000336053 ZBTB47Q9UFB7 747 aaPredicted RBP12.27□□□□□ -0.44
HNRNPC-201ENST00000336053 KIF21BO75037 1637 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms