RNA–Protein interactions for RNA: ENST00000572053.5

ABCC1-203, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 3

Gene ABCC1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-203ENST00000572053 NISCHQ9Y2I1 1504 aa29.17■■■□□ 2.26
ABCC1-203ENST00000572053 CCDC180Q9P1Z9 1646 aa26.22■■□□□ 1.79
ABCC1-203ENST00000572053 ABCC9O60706 1549 aa26.14■■□□□ 1.78
ABCC1-203ENST00000572053 RB1CC1Q8TDY2 1594 aa24.95■■□□□ 1.58
ABCC1-203ENST00000572053 NACADO15069 1562 aa24.78■■□□□ 1.56
ABCC1-203ENST00000572053 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
ABCC1-203ENST00000572053 MYO15BQ96JP2 1530 aa24.46■■□□□ 1.51
ABCC1-203ENST00000572053 DNAJC5BQ9UF47 199 aa24.42■■□□□ 1.5
ABCC1-203ENST00000572053 UNC13AQ9UPW8 1703 aa24.31■■□□□ 1.48
ABCC1-203ENST00000572053 PABPN1Q86U42 306 aaKnown RBP eCLIP24.29■■□□□ 1.48
ABCC1-203ENST00000572053 ZCCHC6Q5VYS8 1495 aaKnown RBP24.2■■□□□ 1.47
ABCC1-203ENST00000572053 BICRAQ9NZM4 1560 aa24.16■■□□□ 1.46
ABCC1-203ENST00000572053 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
ABCC1-203ENST00000572053 SHROOM4Q9ULL8 1493 aa23.96■■□□□ 1.43
ABCC1-203ENST00000572053 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
ABCC1-203ENST00000572053 CC2D2AQ9P2K1 1620 aa23.62■■□□□ 1.37
ABCC1-203ENST00000572053 EIF4G1Q04637 1599 aaKnown RBP23.6■■□□□ 1.37
ABCC1-203ENST00000572053 CECR2Q9BXF3 1484 aa23.57■■□□□ 1.36
ABCC1-203ENST00000572053 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
ABCC1-203ENST00000572053 ATAD2BQ9ULI0 1458 aa22.78■■□□□ 1.24
ABCC1-203ENST00000572053 SMARCA4P51532 1647 aa22.76■■□□□ 1.23
ABCC1-203ENST00000572053 SMARCA2P51531 1590 aa22.76■■□□□ 1.23
ABCC1-203ENST00000572053 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
ABCC1-203ENST00000572053 BAZ1AQ9NRL2 1556 aaPredicted RBP22.68■■□□□ 1.22
ABCC1-203ENST00000572053 ERCC6Q03468 1493 aa22.63■■□□□ 1.21
ABCC1-203ENST00000572053 CUX2O14529 1486 aa22.6■■□□□ 1.21
ABCC1-203ENST00000572053 BAZ1BQ9UIG0 1483 aaKnown RBP22.59■■□□□ 1.21
ABCC1-203ENST00000572053 PEG3Q9GZU2 1588 aa22.56■■□□□ 1.2
ABCC1-203ENST00000572053 DNAJC5Q9H3Z4 198 aa22.48■■□□□ 1.19
ABCC1-203ENST00000572053 MROH2BQ7Z745 1585 aa22.45■■□□□ 1.18
ABCC1-203ENST00000572053 NESP48681 1621 aa22.43■■□□□ 1.18
ABCC1-203ENST00000572053 LAMC3Q9Y6N6 1575 aa22.37■■□□□ 1.17
ABCC1-203ENST00000572053 THOC2Q8NI27 1593 aaKnown RBP22.26■■□□□ 1.15
ABCC1-203ENST00000572053 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
ABCC1-203ENST00000572053 WIZO95785 1651 aa22.17■■□□□ 1.14
ABCC1-203ENST00000572053 KIF21AQ7Z4S6 1674 aa22.17■■□□□ 1.14
ABCC1-203ENST00000572053 CADPSQ9ULU8 1353 aa22.15■■□□□ 1.14
ABCC1-203ENST00000572053 MRC2Q9UBG0 1479 aa22.03■■□□□ 1.12
ABCC1-203ENST00000572053 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
ABCC1-203ENST00000572053 WDR62O43379 1518 aa21.98■■□□□ 1.11
ABCC1-203ENST00000572053 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
ABCC1-203ENST00000572053 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
ABCC1-203ENST00000572053 CFTRP13569 1480 aa21.91■■□□□ 1.1
ABCC1-203ENST00000572053 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
ABCC1-203ENST00000572053 PRDM2Q13029 1718 aa21.71■■□□□ 1.07
ABCC1-203ENST00000572053 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.07
ABCC1-203ENST00000572053 CCDC88BA6NC98 1476 aa21.65■■□□□ 1.06
ABCC1-203ENST00000572053 IFT140Q96RY7 1462 aa21.52■■□□□ 1.03
ABCC1-203ENST00000572053 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
ABCC1-203ENST00000572053 TRIM41Q8WV44 630 aa21.51■■□□□ 1.03
ABCC1-203ENST00000572053 ABCC8Q09428 1581 aa21.49■■□□□ 1.03
ABCC1-203ENST00000572053 TOPBP1Q92547 1522 aa21.49■■□□□ 1.03
ABCC1-203ENST00000572053 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
ABCC1-203ENST00000572053 ZNF608Q9ULD9 1512 aaPredicted RBP21.41■■□□□ 1.02
ABCC1-203ENST00000572053 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
ABCC1-203ENST00000572053 TARBP1Q13395 1621 aaKnown RBP21.29■■□□□ 1
ABCC1-203ENST00000572053 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
ABCC1-203ENST00000572053 RIMBP3CA6NJZ7 1639 aa21.23■□□□□ 0.99
ABCC1-203ENST00000572053 RIMBP3BA6NNM3 1639 aa21.23■□□□□ 0.99
ABCC1-203ENST00000572053 RIMBP3Q9UFD9 1639 aa21.23■□□□□ 0.99
ABCC1-203ENST00000572053 AQRO60306 1485 aaKnown RBP eCLIP21.22■□□□□ 0.99
ABCC1-203ENST00000572053 ARHGEF11O15085 1522 aa21.19■□□□□ 0.98
ABCC1-203ENST00000572053 CHD1O14646 1710 aa21.16■□□□□ 0.98
ABCC1-203ENST00000572053 SOGA1O94964 1423 aa21.16■□□□□ 0.98
ABCC1-203ENST00000572053 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
ABCC1-203ENST00000572053 RAD54L2Q9Y4B4 1467 aa21.15■□□□□ 0.98
ABCC1-203ENST00000572053 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
ABCC1-203ENST00000572053 CUX1P39880 1505 aa21.1■□□□□ 0.97
ABCC1-203ENST00000572053 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
ABCC1-203ENST00000572053 FBLN2P98095 1184 aa21.09■□□□□ 0.97
ABCC1-203ENST00000572053 SNAPC4Q5SXM2 1469 aa21.05■□□□□ 0.96
ABCC1-203ENST00000572053 MAGI1Q96QZ7 1491 aaPredicted RBP21.03■□□□□ 0.96
ABCC1-203ENST00000572053 GRIN2BQ13224 1484 aa21.01■□□□□ 0.95
ABCC1-203ENST00000572053 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
ABCC1-203ENST00000572053 CYB5RLQ6IPT4 315 aa20.98■□□□□ 0.95
ABCC1-203ENST00000572053 ARAP1Q96P48 1450 aa20.97■□□□□ 0.95
ABCC1-203ENST00000572053 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
ABCC1-203ENST00000572053 CHMP7Q8WUX9 453 aaPredicted RBP20.96■□□□□ 0.95
ABCC1-203ENST00000572053 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
ABCC1-203ENST00000572053 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
ABCC1-203ENST00000572053 GAPVD1Q14C86 1478 aa20.93■□□□□ 0.94
ABCC1-203ENST00000572053 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
ABCC1-203ENST00000572053 PBRM1Q86U86 1689 aa20.92■□□□□ 0.94
ABCC1-203ENST00000572053 ABCA5Q8WWZ7 1642 aa20.88■□□□□ 0.93
ABCC1-203ENST00000572053 WRNQ14191 1432 aaPredicted RBP eCLIP20.85■□□□□ 0.93
ABCC1-203ENST00000572053 TOP2BQ02880 1626 aa20.8■□□□□ 0.92
ABCC1-203ENST00000572053 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
ABCC1-203ENST00000572053 TRHP20396 242 aaPredicted RBP20.77■□□□□ 0.92
ABCC1-203ENST00000572053 GRIN2AQ12879 1464 aa20.74■□□□□ 0.91
ABCC1-203ENST00000572053 ADAMTS12P58397 1594 aa20.73■□□□□ 0.91
ABCC1-203ENST00000572053 FHAD1B1AJZ9 1412 aa20.68■□□□□ 0.9
ABCC1-203ENST00000572053 ERICH3Q5RHP9 1530 aa20.68■□□□□ 0.9
ABCC1-203ENST00000572053 NUP160Q12769 1436 aa20.67■□□□□ 0.9
ABCC1-203ENST00000572053 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
ABCC1-203ENST00000572053 SHROOM2Q13796 1616 aa20.56■□□□□ 0.88
ABCC1-203ENST00000572053 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
ABCC1-203ENST00000572053 PRG4Q92954 1404 aaPredicted RBP20.44■□□□□ 0.86
ABCC1-203ENST00000572053 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
ABCC1-203ENST00000572053 JPH4Q96JJ6 628 aa20.41■□□□□ 0.86
ABCC1-203ENST00000572053 KIF27Q86VH2 1401 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms