RNA–Protein interactions for RNA: ENST00000513250.1

CLPTM1L-214, Transcript of CLPTM1 like, humanhuman

TSL 3

Gene CLPTM1L, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-214ENST00000513250 NISCHQ9Y2I1 1504 aa36.56■■■■□ 3.44
CLPTM1L-214ENST00000513250 ABCC9O60706 1549 aa33.2■■■□□ 2.91
CLPTM1L-214ENST00000513250 CCDC180Q9P1Z9 1646 aa32.88■■■□□ 2.85
CLPTM1L-214ENST00000513250 RB1CC1Q8TDY2 1594 aa31.43■■■□□ 2.62
CLPTM1L-214ENST00000513250 DNAJC5BQ9UF47 199 aa31.36■■■□□ 2.61
CLPTM1L-214ENST00000513250 NACADO15069 1562 aa31.14■■■□□ 2.58
CLPTM1L-214ENST00000513250 DCAF8L2P0C7V8 631 aa31.02■■■□□ 2.56
CLPTM1L-214ENST00000513250 PABPN1Q86U42 306 aaKnown RBP eCLIP30.89■■■□□ 2.54
CLPTM1L-214ENST00000513250 UNC13AQ9UPW8 1703 aa30.76■■■□□ 2.51
CLPTM1L-214ENST00000513250 MYO15BQ96JP2 1530 aa30.59■■■□□ 2.49
CLPTM1L-214ENST00000513250 BICRAQ9NZM4 1560 aa30.57■■■□□ 2.48
CLPTM1L-214ENST00000513250 ZCCHC6Q5VYS8 1495 aaKnown RBP30.26■■■□□ 2.44
CLPTM1L-214ENST00000513250 DCAF1Q9Y4B6 1507 aa30.13■■■□□ 2.41
CLPTM1L-214ENST00000513250 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
CLPTM1L-214ENST00000513250 SHROOM4Q9ULL8 1493 aa30.03■■■□□ 2.4
CLPTM1L-214ENST00000513250 CC2D2AQ9P2K1 1620 aa29.95■■■□□ 2.38
CLPTM1L-214ENST00000513250 CECR2Q9BXF3 1484 aa29.9■■■□□ 2.38
CLPTM1L-214ENST00000513250 EIF4G1Q04637 1599 aaKnown RBP29.82■■■□□ 2.36
CLPTM1L-214ENST00000513250 DNAJC5Q9H3Z4 198 aa28.9■■■□□ 2.22
CLPTM1L-214ENST00000513250 NCAPD3P42695 1498 aa28.76■■■□□ 2.19
CLPTM1L-214ENST00000513250 ERCC6Q03468 1493 aa28.66■■■□□ 2.18
CLPTM1L-214ENST00000513250 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
CLPTM1L-214ENST00000513250 CUX2O14529 1486 aa28.65■■■□□ 2.18
CLPTM1L-214ENST00000513250 SMARCA4P51532 1647 aa28.59■■■□□ 2.17
CLPTM1L-214ENST00000513250 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
CLPTM1L-214ENST00000513250 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
CLPTM1L-214ENST00000513250 NESP48681 1621 aa28.47■■■□□ 2.15
CLPTM1L-214ENST00000513250 BAZ1BQ9UIG0 1483 aaKnown RBP28.39■■■□□ 2.13
CLPTM1L-214ENST00000513250 BAZ1AQ9NRL2 1556 aaPredicted RBP28.38■■■□□ 2.13
CLPTM1L-214ENST00000513250 PEG3Q9GZU2 1588 aa28.27■■■□□ 2.12
CLPTM1L-214ENST00000513250 MROH2BQ7Z745 1585 aa28.21■■■□□ 2.11
CLPTM1L-214ENST00000513250 THOC2Q8NI27 1593 aaKnown RBP28.2■■■□□ 2.1
CLPTM1L-214ENST00000513250 LAMC3Q9Y6N6 1575 aa28.15■■■□□ 2.1
CLPTM1L-214ENST00000513250 KIF21AQ7Z4S6 1674 aa28.07■■■□□ 2.08
CLPTM1L-214ENST00000513250 PDS5BQ9NTI5 1447 aa27.99■■■□□ 2.07
CLPTM1L-214ENST00000513250 CADPSQ9ULU8 1353 aa27.88■■■□□ 2.05
CLPTM1L-214ENST00000513250 WIZO95785 1651 aa27.87■■■□□ 2.05
CLPTM1L-214ENST00000513250 MRC2Q9UBG0 1479 aa27.8■■■□□ 2.04
CLPTM1L-214ENST00000513250 WDR62O43379 1518 aa27.73■■■□□ 2.03
CLPTM1L-214ENST00000513250 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.02
CLPTM1L-214ENST00000513250 TRIM41Q8WV44 630 aa27.61■■■□□ 2.01
CLPTM1L-214ENST00000513250 FANCD2Q9BXW9 1451 aa27.6■■■□□ 2.01
CLPTM1L-214ENST00000513250 CFTRP13569 1480 aa27.52■■■□□ 2
CLPTM1L-214ENST00000513250 RSF1Q96T23 1441 aaPredicted RBP27.52■■■□□ 2
CLPTM1L-214ENST00000513250 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
CLPTM1L-214ENST00000513250 URB2Q14146 1524 aaKnown RBP27.41■■□□□ 1.98
CLPTM1L-214ENST00000513250 OSCARQ8IYS5 282 aa27.29■■□□□ 1.96
CLPTM1L-214ENST00000513250 PRDM2Q13029 1718 aa27.21■■□□□ 1.95
CLPTM1L-214ENST00000513250 CCDC88BA6NC98 1476 aa27.17■■□□□ 1.94
CLPTM1L-214ENST00000513250 ZNF608Q9ULD9 1512 aaPredicted RBP27.12■■□□□ 1.93
CLPTM1L-214ENST00000513250 IFT140Q96RY7 1462 aa27.08■■□□□ 1.93
CLPTM1L-214ENST00000513250 TOPBP1Q92547 1522 aa27.05■■□□□ 1.92
CLPTM1L-214ENST00000513250 RIMBP3CA6NJZ7 1639 aa27.02■■□□□ 1.92
CLPTM1L-214ENST00000513250 RIMBP3BA6NNM3 1639 aa27.02■■□□□ 1.92
CLPTM1L-214ENST00000513250 RIMBP3Q9UFD9 1639 aa27.02■■□□□ 1.92
CLPTM1L-214ENST00000513250 EIF4G3O43432 1585 aaKnown RBP26.94■■□□□ 1.9
CLPTM1L-214ENST00000513250 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
CLPTM1L-214ENST00000513250 ABCC8Q09428 1581 aa26.9■■□□□ 1.9
CLPTM1L-214ENST00000513250 ARHGEF11O15085 1522 aa26.9■■□□□ 1.9
CLPTM1L-214ENST00000513250 AQRO60306 1485 aaKnown RBP eCLIP26.84■■□□□ 1.897e-7■■■□□ 15.1
CLPTM1L-214ENST00000513250 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
CLPTM1L-214ENST00000513250 CHD1O14646 1710 aa26.79■■□□□ 1.88
CLPTM1L-214ENST00000513250 POLA1P09884 1462 aaPredicted RBP26.76■■□□□ 1.87
CLPTM1L-214ENST00000513250 CYB5RLQ6IPT4 315 aa26.72■■□□□ 1.87
CLPTM1L-214ENST00000513250 FBLN2P98095 1184 aa26.71■■□□□ 1.87
CLPTM1L-214ENST00000513250 RAD54L2Q9Y4B4 1467 aa26.7■■□□□ 1.87
CLPTM1L-214ENST00000513250 ARAP1Q96P48 1450 aa26.63■■□□□ 1.85
CLPTM1L-214ENST00000513250 TDRD9Q8NDG6 1382 aaKnown RBP26.63■■□□□ 1.85
CLPTM1L-214ENST00000513250 SOGA1O94964 1423 aa26.62■■□□□ 1.85
CLPTM1L-214ENST00000513250 FGD5Q6ZNL6 1462 aa26.57■■□□□ 1.84
CLPTM1L-214ENST00000513250 SNAPC4Q5SXM2 1469 aa26.55■■□□□ 1.84
CLPTM1L-214ENST00000513250 CUX1P39880 1505 aa26.52■■□□□ 1.84
CLPTM1L-214ENST00000513250 TRHP20396 242 aaPredicted RBP26.51■■□□□ 1.83
CLPTM1L-214ENST00000513250 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
CLPTM1L-214ENST00000513250 CLASP1Q7Z460 1538 aa26.46■■□□□ 1.83
CLPTM1L-214ENST00000513250 CHMP7Q8WUX9 453 aaPredicted RBP26.44■■□□□ 1.82
CLPTM1L-214ENST00000513250 MAGI1Q96QZ7 1491 aaPredicted RBP26.42■■□□□ 1.82
CLPTM1L-214ENST00000513250 GRIN2BQ13224 1484 aa26.41■■□□□ 1.82
CLPTM1L-214ENST00000513250 SYNJ1O43426 1573 aa26.4■■□□□ 1.82
CLPTM1L-214ENST00000513250 SYNJ2O15056 1496 aa26.35■■□□□ 1.81
CLPTM1L-214ENST00000513250 PBRM1Q86U86 1689 aa26.31■■□□□ 1.8
CLPTM1L-214ENST00000513250 GAPVD1Q14C86 1478 aa26.3■■□□□ 1.8
CLPTM1L-214ENST00000513250 ABCA5Q8WWZ7 1642 aa26.23■■□□□ 1.79
CLPTM1L-214ENST00000513250 ABCA10Q8WWZ4 1543 aa26.22■■□□□ 1.79
CLPTM1L-214ENST00000513250 SUPT5HO00267 1087 aaKnown RBP26.17■■□□□ 1.78
CLPTM1L-214ENST00000513250 GRIN2AQ12879 1464 aa26.09■■□□□ 1.77
CLPTM1L-214ENST00000513250 ERCC6L2Q5T890 1561 aa26.08■■□□□ 1.77
CLPTM1L-214ENST00000513250 WRNQ14191 1432 aaPredicted RBP eCLIP26.07■■□□□ 1.76
CLPTM1L-214ENST00000513250 ADAMTS12P58397 1594 aa26.06■■□□□ 1.76
CLPTM1L-214ENST00000513250 CEP170Q5SW79 1584 aa26.03■■□□□ 1.76
CLPTM1L-214ENST00000513250 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
CLPTM1L-214ENST00000513250 TOP2BQ02880 1626 aa25.99■■□□□ 1.75
CLPTM1L-214ENST00000513250 NUP160Q12769 1436 aa25.99■■□□□ 1.75
CLPTM1L-214ENST00000513250 FHAD1B1AJZ9 1412 aa25.94■■□□□ 1.74
CLPTM1L-214ENST00000513250 SHROOM2Q13796 1616 aa25.91■■□□□ 1.74
CLPTM1L-214ENST00000513250 AEBP2Q6ZN18 517 aaPredicted RBP25.88■■□□□ 1.73
CLPTM1L-214ENST00000513250 ERICH3Q5RHP9 1530 aa25.88■■□□□ 1.73
CLPTM1L-214ENST00000513250 PRG4Q92954 1404 aaPredicted RBP25.79■■□□□ 1.72
CLPTM1L-214ENST00000513250 JPH4Q96JJ6 628 aa25.72■■□□□ 1.71
CLPTM1L-214ENST00000513250 RUSC2Q8N2Y8 1516 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms