RNA–Protein interactions for RNA: ENST00000556513.5

HNRNPC-225, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-225ENST00000556513 NISCHQ9Y2I1 1504 aa25.25■■□□□ 1.63
HNRNPC-225ENST00000556513 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
HNRNPC-225ENST00000556513 ABCC9O60706 1549 aa22.2■■□□□ 1.14
HNRNPC-225ENST00000556513 RB1CC1Q8TDY2 1594 aa21.27■□□□□ 0.99
HNRNPC-225ENST00000556513 DCAF8L2P0C7V8 631 aa21.21■□□□□ 0.99
HNRNPC-225ENST00000556513 NACADO15069 1562 aa21.17■□□□□ 0.98
HNRNPC-225ENST00000556513 ZCCHC6Q5VYS8 1495 aaKnown RBP20.99■□□□□ 0.95
HNRNPC-225ENST00000556513 MYO15BQ96JP2 1530 aa20.95■□□□□ 0.94
HNRNPC-225ENST00000556513 UNC13AQ9UPW8 1703 aa20.92■□□□□ 0.94
HNRNPC-225ENST00000556513 DCAF1Q9Y4B6 1507 aa20.83■□□□□ 0.92
HNRNPC-225ENST00000556513 PABPN1Q86U42 306 aaKnown RBP eCLIP20.71■□□□□ 0.91
HNRNPC-225ENST00000556513 BICRAQ9NZM4 1560 aa20.64■□□□□ 0.9
HNRNPC-225ENST00000556513 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
HNRNPC-225ENST00000556513 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
HNRNPC-225ENST00000556513 AEBP2Q6ZN18 517 aaPredicted RBP20.46■□□□□ 0.87
HNRNPC-225ENST00000556513 SHROOM4Q9ULL8 1493 aa20.31■□□□□ 0.84
HNRNPC-225ENST00000556513 EIF4G1Q04637 1599 aaKnown RBP20.11■□□□□ 0.81
HNRNPC-225ENST00000556513 CC2D2AQ9P2K1 1620 aa20.08■□□□□ 0.8
HNRNPC-225ENST00000556513 CECR2Q9BXF3 1484 aa19.93■□□□□ 0.78
HNRNPC-225ENST00000556513 SMARCA4P51532 1647 aa19.66■□□□□ 0.74
HNRNPC-225ENST00000556513 BAZ1AQ9NRL2 1556 aaPredicted RBP19.58■□□□□ 0.72
HNRNPC-225ENST00000556513 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
HNRNPC-225ENST00000556513 ATAD2BQ9ULI0 1458 aa19.53■□□□□ 0.72
HNRNPC-225ENST00000556513 NCAPD3P42695 1498 aa19.51■□□□□ 0.71
HNRNPC-225ENST00000556513 SMARCA2P51531 1590 aa19.51■□□□□ 0.71
HNRNPC-225ENST00000556513 MROH2BQ7Z745 1585 aa19.48■□□□□ 0.71
HNRNPC-225ENST00000556513 HMGXB3Q12766 1538 aa19.43■□□□□ 0.7
HNRNPC-225ENST00000556513 PEG3Q9GZU2 1588 aa19.41■□□□□ 0.7
HNRNPC-225ENST00000556513 BAZ1BQ9UIG0 1483 aaKnown RBP19.39■□□□□ 0.69
HNRNPC-225ENST00000556513 WIZO95785 1651 aa19.32■□□□□ 0.68
HNRNPC-225ENST00000556513 NESP48681 1621 aa19.19■□□□□ 0.66
HNRNPC-225ENST00000556513 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
HNRNPC-225ENST00000556513 ERCC6Q03468 1493 aa19.13■□□□□ 0.65
HNRNPC-225ENST00000556513 LAMC3Q9Y6N6 1575 aa19.07■□□□□ 0.64
HNRNPC-225ENST00000556513 TOP2AP11388 1531 aaKnown RBP19.03■□□□□ 0.64
HNRNPC-225ENST00000556513 KIF21AQ7Z4S6 1674 aa19.02■□□□□ 0.63
HNRNPC-225ENST00000556513 CADPSQ9ULU8 1353 aa18.95■□□□□ 0.62
HNRNPC-225ENST00000556513 CUX2O14529 1486 aa18.93■□□□□ 0.62
HNRNPC-225ENST00000556513 PDS5BQ9NTI5 1447 aa18.92■□□□□ 0.62
HNRNPC-225ENST00000556513 THOC2Q8NI27 1593 aaKnown RBP18.91■□□□□ 0.62
HNRNPC-225ENST00000556513 CCDC88BA6NC98 1476 aa18.82■□□□□ 0.6
HNRNPC-225ENST00000556513 CFTRP13569 1480 aa18.82■□□□□ 0.6
HNRNPC-225ENST00000556513 PRDM2Q13029 1718 aa18.79■□□□□ 0.6
HNRNPC-225ENST00000556513 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.6
HNRNPC-225ENST00000556513 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
HNRNPC-225ENST00000556513 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
HNRNPC-225ENST00000556513 WDR62O43379 1518 aa18.69■□□□□ 0.58
HNRNPC-225ENST00000556513 SUPT5HO00267 1087 aaKnown RBP18.66■□□□□ 0.58
HNRNPC-225ENST00000556513 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
HNRNPC-225ENST00000556513 DNAJC5Q9H3Z4 198 aa18.5■□□□□ 0.55
HNRNPC-225ENST00000556513 TOPBP1Q92547 1522 aa18.45■□□□□ 0.54
HNRNPC-225ENST00000556513 DNMBPQ6XZF7 1577 aa18.43■□□□□ 0.54
HNRNPC-225ENST00000556513 ABCC8Q09428 1581 aa18.4■□□□□ 0.54
HNRNPC-225ENST00000556513 IFT140Q96RY7 1462 aa18.35■□□□□ 0.53
HNRNPC-225ENST00000556513 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.52
HNRNPC-225ENST00000556513 TARBP1Q13395 1621 aaKnown RBP18.29■□□□□ 0.52
HNRNPC-225ENST00000556513 POLA1P09884 1462 aaPredicted RBP18.29■□□□□ 0.52
HNRNPC-225ENST00000556513 CUX1P39880 1505 aa18.28■□□□□ 0.52
HNRNPC-225ENST00000556513 EIF4G3O43432 1585 aaKnown RBP18.27■□□□□ 0.52
HNRNPC-225ENST00000556513 FGD5Q6ZNL6 1462 aa18.24■□□□□ 0.51
HNRNPC-225ENST00000556513 RAD54L2Q9Y4B4 1467 aa18.24■□□□□ 0.51
HNRNPC-225ENST00000556513 SOGA1O94964 1423 aa18.2■□□□□ 0.5
HNRNPC-225ENST00000556513 AQRO60306 1485 aaKnown RBP eCLIP18.2■□□□□ 0.52e-7■■■■□ 24.5
HNRNPC-225ENST00000556513 WDR97A6NE52 1622 aa18.14■□□□□ 0.49
HNRNPC-225ENST00000556513 TDRD9Q8NDG6 1382 aaKnown RBP18.14■□□□□ 0.49
HNRNPC-225ENST00000556513 OSCARQ8IYS5 282 aa18.13■□□□□ 0.49
HNRNPC-225ENST00000556513 CHD1O14646 1710 aa18.13■□□□□ 0.49
HNRNPC-225ENST00000556513 BIVM-ERCC5R4GMW8 1640 aa18.11■□□□□ 0.49
HNRNPC-225ENST00000556513 SYNJ1O43426 1573 aa18.11■□□□□ 0.49
HNRNPC-225ENST00000556513 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
HNRNPC-225ENST00000556513 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.49
HNRNPC-225ENST00000556513 PBRM1Q86U86 1689 aa18.06■□□□□ 0.48
HNRNPC-225ENST00000556513 FBLN2P98095 1184 aa18.03■□□□□ 0.48
HNRNPC-225ENST00000556513 SNAPC4Q5SXM2 1469 aa18.03■□□□□ 0.48
HNRNPC-225ENST00000556513 ABCA10Q8WWZ4 1543 aa18.02■□□□□ 0.48
HNRNPC-225ENST00000556513 ABCA5Q8WWZ7 1642 aa18.01■□□□□ 0.47
HNRNPC-225ENST00000556513 GRIN2BQ13224 1484 aa18■□□□□ 0.47
HNRNPC-225ENST00000556513 GAPVD1Q14C86 1478 aa18■□□□□ 0.47
HNRNPC-225ENST00000556513 MAGI1Q96QZ7 1491 aaPredicted RBP17.96■□□□□ 0.47
HNRNPC-225ENST00000556513 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
HNRNPC-225ENST00000556513 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
HNRNPC-225ENST00000556513 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
HNRNPC-225ENST00000556513 TRIM41Q8WV44 630 aa17.92■□□□□ 0.46
HNRNPC-225ENST00000556513 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
HNRNPC-225ENST00000556513 SYNJ2O15056 1496 aa17.9■□□□□ 0.46
HNRNPC-225ENST00000556513 ARHGEF11O15085 1522 aa17.87■□□□□ 0.45
HNRNPC-225ENST00000556513 ADAMTS12P58397 1594 aa17.85■□□□□ 0.45
HNRNPC-225ENST00000556513 CLASP1Q7Z460 1538 aa17.83■□□□□ 0.44
HNRNPC-225ENST00000556513 ERICH3Q5RHP9 1530 aa17.81■□□□□ 0.44
HNRNPC-225ENST00000556513 GRIN2AQ12879 1464 aa17.78■□□□□ 0.44
HNRNPC-225ENST00000556513 FHAD1B1AJZ9 1412 aa17.76■□□□□ 0.43
HNRNPC-225ENST00000556513 CEP170Q5SW79 1584 aa17.74■□□□□ 0.43
HNRNPC-225ENST00000556513 ARAP1Q96P48 1450 aa17.72■□□□□ 0.43
HNRNPC-225ENST00000556513 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
HNRNPC-225ENST00000556513 KIF27Q86VH2 1401 aa17.71■□□□□ 0.43
HNRNPC-225ENST00000556513 NUP160Q12769 1436 aa17.68■□□□□ 0.42
HNRNPC-225ENST00000556513 CUL7Q14999 1698 aa17.67■□□□□ 0.42
HNRNPC-225ENST00000556513 IGF1RP08069 1367 aa17.65■□□□□ 0.42
HNRNPC-225ENST00000556513 ERCC6L2Q5T890 1561 aa17.62■□□□□ 0.41
HNRNPC-225ENST00000556513 SENP3Q9H4L4 574 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms