RNA–Protein interactions for RNA: ENST00000557020.5

CALM1-214, Transcript of calmodulin 1, humanhuman

TSL 4

Gene CALM1, Length 557 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-214ENST00000557020 NISCHQ9Y2I1 1504 aa31.03■■■□□ 2.56
CALM1-214ENST00000557020 CCDC180Q9P1Z9 1646 aa27.59■■■□□ 2.01
CALM1-214ENST00000557020 ABCC9O60706 1549 aa26.78■■□□□ 1.88
CALM1-214ENST00000557020 ZCCHC6Q5VYS8 1495 aaKnown RBP25.9■■□□□ 1.74
CALM1-214ENST00000557020 NACADO15069 1562 aa25.83■■□□□ 1.73
CALM1-214ENST00000557020 RB1CC1Q8TDY2 1594 aa25.82■■□□□ 1.72
CALM1-214ENST00000557020 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
CALM1-214ENST00000557020 MYO15BQ96JP2 1530 aa25.7■■□□□ 1.7
CALM1-214ENST00000557020 DCAF1Q9Y4B6 1507 aa25.67■■□□□ 1.7
CALM1-214ENST00000557020 UNC13AQ9UPW8 1703 aa25.43■■□□□ 1.66
CALM1-214ENST00000557020 SCRIBQ14160 1630 aa25.18■■□□□ 1.62
CALM1-214ENST00000557020 BICRAQ9NZM4 1560 aa25.12■■□□□ 1.61
CALM1-214ENST00000557020 PABPN1Q86U42 306 aaKnown RBP eCLIP25.01■■□□□ 1.59
CALM1-214ENST00000557020 SHROOM4Q9ULL8 1493 aa24.76■■□□□ 1.55
CALM1-214ENST00000557020 DNAJC5BQ9UF47 199 aa24.44■■□□□ 1.5
CALM1-214ENST00000557020 EIF4G1Q04637 1599 aaKnown RBP24.39■■□□□ 1.5
CALM1-214ENST00000557020 CC2D2AQ9P2K1 1620 aa24.27■■□□□ 1.48
CALM1-214ENST00000557020 CECR2Q9BXF3 1484 aa24.18■■□□□ 1.46
CALM1-214ENST00000557020 SMARCA4P51532 1647 aa24.1■■□□□ 1.45
CALM1-214ENST00000557020 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
CALM1-214ENST00000557020 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.42
CALM1-214ENST00000557020 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
CALM1-214ENST00000557020 SMARCA2P51531 1590 aa23.84■■□□□ 1.41
CALM1-214ENST00000557020 PEG3Q9GZU2 1588 aa23.83■■□□□ 1.41
CALM1-214ENST00000557020 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
CALM1-214ENST00000557020 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
CALM1-214ENST00000557020 WIZO95785 1651 aa23.74■■□□□ 1.39
CALM1-214ENST00000557020 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
CALM1-214ENST00000557020 BAZ1BQ9UIG0 1483 aaKnown RBP23.67■■□□□ 1.38
CALM1-214ENST00000557020 TOP2AP11388 1531 aaKnown RBP23.45■■□□□ 1.34
CALM1-214ENST00000557020 NESP48681 1621 aa23.26■■□□□ 1.31
CALM1-214ENST00000557020 LAMC3Q9Y6N6 1575 aa23.18■■□□□ 1.3
CALM1-214ENST00000557020 SUPT5HO00267 1087 aaKnown RBP23.15■■□□□ 1.3
CALM1-214ENST00000557020 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
CALM1-214ENST00000557020 CADPSQ9ULU8 1353 aa23.1■■□□□ 1.29
CALM1-214ENST00000557020 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
CALM1-214ENST00000557020 PRDM2Q13029 1718 aa23.03■■□□□ 1.28
CALM1-214ENST00000557020 CFTRP13569 1480 aa23.03■■□□□ 1.28
CALM1-214ENST00000557020 ERCC6Q03468 1493 aa23.03■■□□□ 1.28
CALM1-214ENST00000557020 PDS5BQ9NTI5 1447 aa22.95■■□□□ 1.26
CALM1-214ENST00000557020 THOC2Q8NI27 1593 aaKnown RBP22.91■■□□□ 1.26
CALM1-214ENST00000557020 FANCD2Q9BXW9 1451 aa22.87■■□□□ 1.25
CALM1-214ENST00000557020 CEP164Q9UPV0 1460 aa22.82■■□□□ 1.24
CALM1-214ENST00000557020 MRC2Q9UBG0 1479 aa22.77■■□□□ 1.24
CALM1-214ENST00000557020 CUX2O14529 1486 aa22.73■■□□□ 1.23
CALM1-214ENST00000557020 WDR62O43379 1518 aa22.72■■□□□ 1.23
CALM1-214ENST00000557020 URB2Q14146 1524 aaKnown RBP22.67■■□□□ 1.22
CALM1-214ENST00000557020 TOPBP1Q92547 1522 aa22.55■■□□□ 1.2
CALM1-214ENST00000557020 DNMBPQ6XZF7 1577 aa22.55■■□□□ 1.2
CALM1-214ENST00000557020 ABCC8Q09428 1581 aa22.48■■□□□ 1.19
CALM1-214ENST00000557020 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
CALM1-214ENST00000557020 CUX1P39880 1505 aa22.46■■□□□ 1.19
CALM1-214ENST00000557020 POLA1P09884 1462 aaPredicted RBP22.36■■□□□ 1.17
CALM1-214ENST00000557020 SYNJ1O43426 1573 aa22.34■■□□□ 1.17
CALM1-214ENST00000557020 TARBP1Q13395 1621 aaKnown RBP22.34■■□□□ 1.17
CALM1-214ENST00000557020 BIVM-ERCC5R4GMW8 1640 aa22.34■■□□□ 1.17
CALM1-214ENST00000557020 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
CALM1-214ENST00000557020 IFT140Q96RY7 1462 aa22.33■■□□□ 1.16
CALM1-214ENST00000557020 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
CALM1-214ENST00000557020 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
CALM1-214ENST00000557020 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
CALM1-214ENST00000557020 ZNF608Q9ULD9 1512 aaPredicted RBP22.26■■□□□ 1.15
CALM1-214ENST00000557020 WDR97A6NE52 1622 aa22.24■■□□□ 1.15
CALM1-214ENST00000557020 SOGA1O94964 1423 aa22.23■■□□□ 1.15
CALM1-214ENST00000557020 EIF4G3O43432 1585 aaKnown RBP22.22■■□□□ 1.15
CALM1-214ENST00000557020 AQRO60306 1485 aaKnown RBP eCLIP22.13■■□□□ 1.131e-6■■■■□ 21.8
CALM1-214ENST00000557020 ABCA10Q8WWZ4 1543 aa22.11■■□□□ 1.13
CALM1-214ENST00000557020 TDRD9Q8NDG6 1382 aaKnown RBP22.1■■□□□ 1.13
CALM1-214ENST00000557020 ABCA5Q8WWZ7 1642 aa22.08■■□□□ 1.13
CALM1-214ENST00000557020 PBRM1Q86U86 1689 aa22.06■■□□□ 1.12
CALM1-214ENST00000557020 GAPVD1Q14C86 1478 aa21.99■■□□□ 1.11
CALM1-214ENST00000557020 CHD1O14646 1710 aa21.97■■□□□ 1.11
CALM1-214ENST00000557020 GRIN2BQ13224 1484 aa21.96■■□□□ 1.11
CALM1-214ENST00000557020 SNAPC4Q5SXM2 1469 aa21.94■■□□□ 1.1
CALM1-214ENST00000557020 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
CALM1-214ENST00000557020 ADAMTS12P58397 1594 aa21.85■■□□□ 1.09
CALM1-214ENST00000557020 ERICH3Q5RHP9 1530 aa21.85■■□□□ 1.09
CALM1-214ENST00000557020 TRIM41Q8WV44 630 aa21.82■■□□□ 1.08
CALM1-214ENST00000557020 DNAJC5Q9H3Z4 198 aa21.82■■□□□ 1.08
CALM1-214ENST00000557020 KIF27Q86VH2 1401 aa21.81■■□□□ 1.08
CALM1-214ENST00000557020 SYNJ2O15056 1496 aa21.81■■□□□ 1.08
CALM1-214ENST00000557020 FBLN2P98095 1184 aa21.76■■□□□ 1.07
CALM1-214ENST00000557020 OSCARQ8IYS5 282 aa21.75■■□□□ 1.07
CALM1-214ENST00000557020 RUSC2Q8N2Y8 1516 aa21.75■■□□□ 1.07
CALM1-214ENST00000557020 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
CALM1-214ENST00000557020 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
CALM1-214ENST00000557020 CUL7Q14999 1698 aa21.72■■□□□ 1.07
CALM1-214ENST00000557020 CHMP7Q8WUX9 453 aaPredicted RBP21.71■■□□□ 1.07
CALM1-214ENST00000557020 IGF1RP08069 1367 aa21.71■■□□□ 1.07
CALM1-214ENST00000557020 GRIN2AQ12879 1464 aa21.71■■□□□ 1.07
CALM1-214ENST00000557020 CLASP1Q7Z460 1538 aa21.66■■□□□ 1.06
CALM1-214ENST00000557020 CEP170Q5SW79 1584 aa21.64■■□□□ 1.05
CALM1-214ENST00000557020 NUP160Q12769 1436 aa21.6■■□□□ 1.05
CALM1-214ENST00000557020 CARMIL1Q5VZK9 1371 aa21.58■■□□□ 1.04
CALM1-214ENST00000557020 RIMBP3CA6NJZ7 1639 aa21.54■■□□□ 1.04
CALM1-214ENST00000557020 RIMBP3BA6NNM3 1639 aa21.54■■□□□ 1.04
CALM1-214ENST00000557020 RIMBP3Q9UFD9 1639 aa21.54■■□□□ 1.04
CALM1-214ENST00000557020 ARHGEF11O15085 1522 aa21.51■■□□□ 1.03
CALM1-214ENST00000557020 SHROOM2Q13796 1616 aa21.48■■□□□ 1.03
CALM1-214ENST00000557020 RAPGEF2Q9Y4G8 1499 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms