RNA–Protein interactions for RNA: ENST00000504110.1

C4orf3-202, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-202ENST00000504110 NISCHQ9Y2I1 1504 aa37.44■■■■□ 3.58
C4orf3-202ENST00000504110 CCDC180Q9P1Z9 1646 aa33.11■■■□□ 2.89
C4orf3-202ENST00000504110 ABCC9O60706 1549 aa31.88■■■□□ 2.69
C4orf3-202ENST00000504110 ZCCHC6Q5VYS8 1495 aaKnown RBP31.29■■■□□ 2.6
C4orf3-202ENST00000504110 DCAF8L2P0C7V8 631 aa31.05■■■□□ 2.56
C4orf3-202ENST00000504110 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
C4orf3-202ENST00000504110 NACADO15069 1562 aa31■■■□□ 2.55
C4orf3-202ENST00000504110 MYO15BQ96JP2 1530 aa30.98■■■□□ 2.55
C4orf3-202ENST00000504110 RB1CC1Q8TDY2 1594 aa30.92■■■□□ 2.54
C4orf3-202ENST00000504110 UNC13AQ9UPW8 1703 aa30.23■■■□□ 2.43
C4orf3-202ENST00000504110 SCRIBQ14160 1630 aa30.2■■■□□ 2.43
C4orf3-202ENST00000504110 BICRAQ9NZM4 1560 aa29.94■■■□□ 2.38
C4orf3-202ENST00000504110 PABPN1Q86U42 306 aaKnown RBP eCLIP29.85■■■□□ 2.37
C4orf3-202ENST00000504110 SHROOM4Q9ULL8 1493 aa29.81■■■□□ 2.36
C4orf3-202ENST00000504110 EIF4G1Q04637 1599 aaKnown RBP29.12■■■□□ 2.25
C4orf3-202ENST00000504110 CECR2Q9BXF3 1484 aa29.09■■■□□ 2.25
C4orf3-202ENST00000504110 BAZ1AQ9NRL2 1556 aaPredicted RBP29■■■□□ 2.23
C4orf3-202ENST00000504110 SMARCA4P51532 1647 aa28.95■■■□□ 2.23
C4orf3-202ENST00000504110 CC2D2AQ9P2K1 1620 aa28.88■■■□□ 2.21
C4orf3-202ENST00000504110 DNAJC5BQ9UF47 199 aa28.86■■■□□ 2.21
C4orf3-202ENST00000504110 MROH2BQ7Z745 1585 aa28.84■■■□□ 2.21
C4orf3-202ENST00000504110 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
C4orf3-202ENST00000504110 SMARCA2P51531 1590 aa28.67■■■□□ 2.18
C4orf3-202ENST00000504110 PEG3Q9GZU2 1588 aa28.67■■■□□ 2.18
C4orf3-202ENST00000504110 ATAD2BQ9ULI0 1458 aa28.67■■■□□ 2.18
C4orf3-202ENST00000504110 NCAPD3P42695 1498 aa28.59■■■□□ 2.17
C4orf3-202ENST00000504110 WIZO95785 1651 aa28.58■■■□□ 2.16
C4orf3-202ENST00000504110 HMGXB3Q12766 1538 aa28.5■■■□□ 2.15
C4orf3-202ENST00000504110 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
C4orf3-202ENST00000504110 TOP2AP11388 1531 aaKnown RBP28.31■■■□□ 2.12
C4orf3-202ENST00000504110 SUPT5HO00267 1087 aaKnown RBP28.3■■■□□ 2.12
C4orf3-202ENST00000504110 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.07
C4orf3-202ENST00000504110 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
C4orf3-202ENST00000504110 CADPSQ9ULU8 1353 aa27.77■■■□□ 2.04
C4orf3-202ENST00000504110 NESP48681 1621 aa27.72■■■□□ 2.03
C4orf3-202ENST00000504110 CFTRP13569 1480 aa27.7■■■□□ 2.03
C4orf3-202ENST00000504110 PRDM2Q13029 1718 aa27.59■■■□□ 2.01
C4orf3-202ENST00000504110 PDS5BQ9NTI5 1447 aa27.56■■■□□ 2
C4orf3-202ENST00000504110 FANCD2Q9BXW9 1451 aa27.45■■□□□ 1.99
C4orf3-202ENST00000504110 ERCC6Q03468 1493 aa27.44■■□□□ 1.98
C4orf3-202ENST00000504110 KIF21AQ7Z4S6 1674 aa27.44■■□□□ 1.98
C4orf3-202ENST00000504110 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
C4orf3-202ENST00000504110 MRC2Q9UBG0 1479 aa27.24■■□□□ 1.95
C4orf3-202ENST00000504110 THOC2Q8NI27 1593 aaKnown RBP27.23■■□□□ 1.95
C4orf3-202ENST00000504110 WDR62O43379 1518 aa27.14■■□□□ 1.94
C4orf3-202ENST00000504110 URB2Q14146 1524 aaKnown RBP27.14■■□□□ 1.94
C4orf3-202ENST00000504110 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
C4orf3-202ENST00000504110 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
C4orf3-202ENST00000504110 TOPBP1Q92547 1522 aa27.07■■□□□ 1.92
C4orf3-202ENST00000504110 WRNQ14191 1432 aaPredicted RBP eCLIP27.05■■□□□ 1.92
C4orf3-202ENST00000504110 CUX1P39880 1505 aa27.03■■□□□ 1.92
C4orf3-202ENST00000504110 CUX2O14529 1486 aa27.01■■□□□ 1.91
C4orf3-202ENST00000504110 BIVM-ERCC5R4GMW8 1640 aa26.96■■□□□ 1.91
C4orf3-202ENST00000504110 SYNJ1O43426 1573 aa26.95■■□□□ 1.9
C4orf3-202ENST00000504110 TOP2BQ02880 1626 aa26.94■■□□□ 1.9
C4orf3-202ENST00000504110 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
C4orf3-202ENST00000504110 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
C4orf3-202ENST00000504110 DNAJC5Q9H3Z4 198 aa26.84■■□□□ 1.89
C4orf3-202ENST00000504110 IFT140Q96RY7 1462 aa26.79■■□□□ 1.88
C4orf3-202ENST00000504110 SOGA1O94964 1423 aa26.77■■□□□ 1.88
C4orf3-202ENST00000504110 TARBP1Q13395 1621 aaKnown RBP26.74■■□□□ 1.87
C4orf3-202ENST00000504110 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
C4orf3-202ENST00000504110 TRIM41Q8WV44 630 aa26.73■■□□□ 1.87
C4orf3-202ENST00000504110 CHIC1Q5VXU3 224 aa26.7■■□□□ 1.86
C4orf3-202ENST00000504110 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
C4orf3-202ENST00000504110 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
C4orf3-202ENST00000504110 ZNF608Q9ULD9 1512 aaPredicted RBP26.6■■□□□ 1.85
C4orf3-202ENST00000504110 EIF4G3O43432 1585 aaKnown RBP26.54■■□□□ 1.84
C4orf3-202ENST00000504110 TDRD9Q8NDG6 1382 aaKnown RBP26.54■■□□□ 1.84
C4orf3-202ENST00000504110 AQRO60306 1485 aaKnown RBP eCLIP26.51■■□□□ 1.833e-6■■■□□ 17.9
C4orf3-202ENST00000504110 ABCA5Q8WWZ7 1642 aa26.5■■□□□ 1.83
C4orf3-202ENST00000504110 GAPVD1Q14C86 1478 aa26.47■■□□□ 1.83
C4orf3-202ENST00000504110 KIF27Q86VH2 1401 aa26.46■■□□□ 1.83
C4orf3-202ENST00000504110 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
C4orf3-202ENST00000504110 GRIN2BQ13224 1484 aa26.41■■□□□ 1.82
C4orf3-202ENST00000504110 ERICH3Q5RHP9 1530 aa26.34■■□□□ 1.81
C4orf3-202ENST00000504110 RUSC2Q8N2Y8 1516 aa26.34■■□□□ 1.81
C4orf3-202ENST00000504110 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
C4orf3-202ENST00000504110 MAGI1Q96QZ7 1491 aaPredicted RBP26.3■■□□□ 1.8
C4orf3-202ENST00000504110 EEA1Q15075 1411 aa26.29■■□□□ 1.8
C4orf3-202ENST00000504110 IGF1RP08069 1367 aa26.27■■□□□ 1.8
C4orf3-202ENST00000504110 ADAMTS12P58397 1594 aa26.21■■□□□ 1.79
C4orf3-202ENST00000504110 CUL7Q14999 1698 aa26.21■■□□□ 1.79
C4orf3-202ENST00000504110 FHAD1B1AJZ9 1412 aa26.19■■□□□ 1.78
C4orf3-202ENST00000504110 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
C4orf3-202ENST00000504110 CSRNP3Q8WYN3 585 aa26.15■■□□□ 1.78
C4orf3-202ENST00000504110 FAM9AQ8IZU1 332 aaPredicted RBP26.14■■□□□ 1.78
C4orf3-202ENST00000504110 CARMIL1Q5VZK9 1371 aa26.13■■□□□ 1.77
C4orf3-202ENST00000504110 CHD1O14646 1710 aa26.13■■□□□ 1.77
C4orf3-202ENST00000504110 CHMP7Q8WUX9 453 aaPredicted RBP26.11■■□□□ 1.77
C4orf3-202ENST00000504110 FBLN2P98095 1184 aa26.09■■□□□ 1.77
C4orf3-202ENST00000504110 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
C4orf3-202ENST00000504110 PRXQ9BXM0 1461 aa26.06■■□□□ 1.76
C4orf3-202ENST00000504110 RAPGEF2Q9Y4G8 1499 aa26.04■■□□□ 1.76
C4orf3-202ENST00000504110 KIF21BO75037 1637 aa25.97■■□□□ 1.75
C4orf3-202ENST00000504110 OSCARQ8IYS5 282 aa25.96■■□□□ 1.75
C4orf3-202ENST00000504110 NUP160Q12769 1436 aa25.93■■□□□ 1.74
C4orf3-202ENST00000504110 CEP170Q5SW79 1584 aa25.91■■□□□ 1.74
C4orf3-202ENST00000504110 GOLGA3Q08378 1498 aa25.85■■□□□ 1.73
C4orf3-202ENST00000504110 CLASP1Q7Z460 1538 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms