RNA–Protein interactions for RNA: ENST00000261024.6

SLC40A1-201, Transcript of solute carrier family 40 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC40A1, Length 3,442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-201ENST00000261024 NISCHQ9Y2I1 1504 aa27.14■■□□□ 1.93
SLC40A1-201ENST00000261024 HRCP23327 699 aa25.33■■□□□ 1.65
SLC40A1-201ENST00000261024 PPARGC1BQ86YN6 1023 aaKnown RBP24.99■■□□□ 1.59
SLC40A1-201ENST00000261024 PCGF6Q9BYE7 350 aa24.89■■□□□ 1.58
SLC40A1-201ENST00000261024 SUPT5HO00267 1087 aaKnown RBP24.76■■□□□ 1.55
SLC40A1-201ENST00000261024 PELP1Q8IZL8 1130 aaKnown RBP24.75■■□□□ 1.55
SLC40A1-201ENST00000261024 SHROOM4Q9ULL8 1493 aa24.72■■□□□ 1.55
SLC40A1-201ENST00000261024 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.5
SLC40A1-201ENST00000261024 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
SLC40A1-201ENST00000261024 SCAF1Q9H7N4 1312 aaKnown RBP24.17■■□□□ 1.46
SLC40A1-201ENST00000261024 LOC105371045A0A1W2PR82 267 aa23.85■■□□□ 1.41
SLC40A1-201ENST00000261024 TRIM26Q12899 539 aaPredicted RBP23.85■■□□□ 1.41
SLC40A1-201ENST00000261024 MYT1Q01538 1121 aa23.82■■□□□ 1.4
SLC40A1-201ENST00000261024 DCAF1Q9Y4B6 1507 aa23.81■■□□□ 1.4
SLC40A1-201ENST00000261024 ZEB1P37275 1124 aaPredicted RBP23.69■■□□□ 1.38
SLC40A1-201ENST00000261024 CCDC180Q9P1Z9 1646 aa23.54■■□□□ 1.36
SLC40A1-201ENST00000261024 ACIN1Q9UKV3 1341 aaKnown RBP23.47■■□□□ 1.35
SLC40A1-201ENST00000261024 NEUROD1Q13562 356 aa23.46■■□□□ 1.35
SLC40A1-201ENST00000261024 GTF3C3Q9Y5Q9 886 aa23.4■■□□□ 1.34
SLC40A1-201ENST00000261024 CENPBP07199 599 aaPredicted RBP23.21■■□□□ 1.31
SLC40A1-201ENST00000261024 DCAF8L2P0C7V8 631 aa23.19■■□□□ 1.3
SLC40A1-201ENST00000261024 ZCCHC6Q5VYS8 1495 aaKnown RBP23.09■■□□□ 1.29
SLC40A1-201ENST00000261024 EHMT2Q96KQ7 1210 aa23.05■■□□□ 1.28
SLC40A1-201ENST00000261024 DIEXFQ68CQ4 756 aaKnown RBP23.01■■□□□ 1.27
SLC40A1-201ENST00000261024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.98■■□□□ 1.27
SLC40A1-201ENST00000261024 FAM9AQ8IZU1 332 aaPredicted RBP22.97■■□□□ 1.27
SLC40A1-201ENST00000261024 CCER1Q8TC90 406 aaPredicted RBP22.94■■□□□ 1.26
SLC40A1-201ENST00000261024 YTHDC1Q96MU7 727 aaKnown RBP22.87■■□□□ 1.25
SLC40A1-201ENST00000261024 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
SLC40A1-201ENST00000261024 TTBK1Q5TCY1 1321 aaPredicted RBP22.54■■□□□ 1.2
SLC40A1-201ENST00000261024 BCL11AQ9H165 835 aa22.44■■□□□ 1.18
SLC40A1-201ENST00000261024 ZNF316A6NFI3 1004 aaPredicted RBP22.44■■□□□ 1.18
SLC40A1-201ENST00000261024 MIER1Q8N108 512 aa22.39■■□□□ 1.17
SLC40A1-201ENST00000261024 ANP32EQ9BTT0 268 aa22.26■■□□□ 1.15
SLC40A1-201ENST00000261024 SUPT16HQ9Y5B9 1047 aaKnown RBP22.13■■□□□ 1.13
SLC40A1-201ENST00000261024 CSRNP3Q8WYN3 585 aa22.09■■□□□ 1.13
SLC40A1-201ENST00000261024 TSHZ2Q9NRE2 1034 aa22.09■■□□□ 1.13
SLC40A1-201ENST00000261024 RSF1Q96T23 1441 aaPredicted RBP22.03■■□□□ 1.12
SLC40A1-201ENST00000261024 RB1CC1Q8TDY2 1594 aa22.02■■□□□ 1.12
SLC40A1-201ENST00000261024 ABCC9O60706 1549 aa21.99■■□□□ 1.11
SLC40A1-201ENST00000261024 HNRNPUL2Q1KMD3 747 aaKnown RBP21.89■■□□□ 1.1
SLC40A1-201ENST00000261024 CLSPNQ9HAW4 1339 aa21.89■■□□□ 1.09
SLC40A1-201ENST00000261024 BCANQ96GW7 911 aa21.85■■□□□ 1.09
SLC40A1-201ENST00000261024 CEP162Q5TB80 1403 aa21.71■■□□□ 1.07
SLC40A1-201ENST00000261024 WRNQ14191 1432 aaPredicted RBP eCLIP21.7■■□□□ 1.06
SLC40A1-201ENST00000261024 UBTFP17480 764 aaKnown RBP21.65■■□□□ 1.06
SLC40A1-201ENST00000261024 PRKCSHP14314 528 aaPredicted RBP21.63■■□□□ 1.05
SLC40A1-201ENST00000261024 SCRIBQ14160 1630 aa21.6■■□□□ 1.05
SLC40A1-201ENST00000261024 FKBP8Q14318 412 aa21.6■■□□□ 1.05
SLC40A1-201ENST00000261024 RBM19Q9Y4C8 960 aaKnown RBP21.58■■□□□ 1.05
SLC40A1-201ENST00000261024 KCNH8Q96L42 1107 aa21.51■■□□□ 1.03
SLC40A1-201ENST00000261024 ITGAEP38570 1179 aa21.48■■□□□ 1.03
SLC40A1-201ENST00000261024 TNIKQ9UKE5 1360 aa21.45■■□□□ 1.02
SLC40A1-201ENST00000261024 NEFLP07196 543 aa21.42■■□□□ 1.02
SLC40A1-201ENST00000261024 ERICH6Q7L0X2 663 aa21.41■■□□□ 1.02
SLC40A1-201ENST00000261024 CCDC88BA6NC98 1476 aa21.38■■□□□ 1.01
SLC40A1-201ENST00000261024 MSH5O43196 834 aa21.38■■□□□ 1.01
SLC40A1-201ENST00000261024 CECR2Q9BXF3 1484 aa21.37■■□□□ 1.01
SLC40A1-201ENST00000261024 SOGA1O94964 1423 aa21.37■■□□□ 1.01
SLC40A1-201ENST00000261024 APLP2Q06481 763 aa21.36■■□□□ 1.01
SLC40A1-201ENST00000261024 ABCC8Q09428 1581 aa21.35■■□□□ 1.01
SLC40A1-201ENST00000261024 RANGAP1P46060 587 aaPredicted RBP21.31■■□□□ 1
SLC40A1-201ENST00000261024 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
SLC40A1-201ENST00000261024 WIZO95785 1651 aa21.27■■□□□ 1
SLC40A1-201ENST00000261024 TRIM52Q96A61 297 aa21.23■□□□□ 0.99
SLC40A1-201ENST00000261024 RUSC2Q8N2Y8 1516 aa21.22■□□□□ 0.99
SLC40A1-201ENST00000261024 DHX57Q6P158 1386 aaKnown RBP21.21■□□□□ 0.99
SLC40A1-201ENST00000261024 DDX10Q13206 875 aaKnown RBP21.16■□□□□ 0.98
SLC40A1-201ENST00000261024 GOLGA3Q08378 1498 aa21.15■□□□□ 0.98
SLC40A1-201ENST00000261024 DEKP35659 375 aaKnown RBP21.14■□□□□ 0.97
SLC40A1-201ENST00000261024 EIF4G1Q04637 1599 aaKnown RBP21.1■□□□□ 0.97
SLC40A1-201ENST00000261024 CLIP1P30622 1438 aa21.09■□□□□ 0.97
SLC40A1-201ENST00000261024 ANO8Q9HCE9 1232 aaPredicted RBP21.09■□□□□ 0.97
SLC40A1-201ENST00000261024 CDK11AQ9UQ88 783 aaPredicted RBP21.09■□□□□ 0.97
SLC40A1-201ENST00000261024 FANCIQ9NVI1 1328 aa21.08■□□□□ 0.96
SLC40A1-201ENST00000261024 IRX6P78412 446 aaPredicted RBP21.07■□□□□ 0.96
SLC40A1-201ENST00000261024 EEA1Q15075 1411 aa21.05■□□□□ 0.96
SLC40A1-201ENST00000261024 VPS8Q8N3P4 1428 aa21.02■□□□□ 0.96
SLC40A1-201ENST00000261024 NBR1Q14596 966 aa20.99■□□□□ 0.95
SLC40A1-201ENST00000261024 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
SLC40A1-201ENST00000261024 MYT1LQ9UL68 1186 aa20.98■□□□□ 0.95
SLC40A1-201ENST00000261024 HIRIP3Q9BW71 556 aaPredicted RBP20.97■□□□□ 0.95
SLC40A1-201ENST00000261024 ANP32CO43423 234 aa20.91■□□□□ 0.94
SLC40A1-201ENST00000261024 CEP164Q9UPV0 1460 aa20.89■□□□□ 0.93
SLC40A1-201ENST00000261024 SALL2Q9Y467 1007 aaPredicted RBP20.87■□□□□ 0.93
SLC40A1-201ENST00000261024 KANK4Q5T7N3 995 aaPredicted RBP20.84■□□□□ 0.93
SLC40A1-201ENST00000261024 CCDC136Q96JN2 1154 aa20.84■□□□□ 0.93
SLC40A1-201ENST00000261024 NACADO15069 1562 aa20.82■□□□□ 0.92
SLC40A1-201ENST00000261024 HNRNPUQ00839 825 aaKnown RBP eCLIP20.81■□□□□ 0.92
SLC40A1-201ENST00000261024 CCER2I3L3R5 266 aa20.79■□□□□ 0.92
SLC40A1-201ENST00000261024 PPP1R15AO75807 674 aaPredicted RBP20.79■□□□□ 0.92
SLC40A1-201ENST00000261024 RTN4Q9NQC3 1192 aaKnown RBP20.78■□□□□ 0.92
SLC40A1-201ENST00000261024 SIN3AQ96ST3 1273 aa20.77■□□□□ 0.92
SLC40A1-201ENST00000261024 NOP58Q9Y2X3 529 aaKnown RBP20.77■□□□□ 0.92
SLC40A1-201ENST00000261024 KIF21BO75037 1637 aa20.74■□□□□ 0.91
SLC40A1-201ENST00000261024 RAPGEF2Q9Y4G8 1499 aa20.73■□□□□ 0.91
SLC40A1-201ENST00000261024 PAK3O75914 559 aaPredicted RBP20.73■□□□□ 0.91
SLC40A1-201ENST00000261024 TOP2AP11388 1531 aaKnown RBP20.73■□□□□ 0.91
SLC40A1-201ENST00000261024 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
SLC40A1-201ENST00000261024 RTL5Q5HYW3 569 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms