Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.92□□□□□ -0.982e-13■□□□□ 9.3
DDX3XO00571 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.92□□□□□ -0.982e-13■□□□□ 9.3
DDX3XO00571 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.992e-13■□□□□ 9.3
DDX3XO00571 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.64□□□□□ -1.032e-13■□□□□ 9.3
DDX3XO00571 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.63□□□□□ -1.032e-13■□□□□ 9.3
DDX3XO00571 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.63□□□□□ -1.032e-13■□□□□ 9.3
DDX3XO00571 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.51□□□□□ -1.052e-13■□□□□ 9.3
DDX3XO00571 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.51□□□□□ -1.052e-13■□□□□ 9.3
DDX3XO00571 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.41□□□□□ -1.062e-13■□□□□ 9.3
DDX3XO00571 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.33□□□□□ -1.082e-13■□□□□ 9.3
DDX3XO00571 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.31□□□□□ -1.082e-13■□□□□ 9.3
DDX3XO00571 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.21□□□□□ -1.12e-13■□□□□ 9.3
DDX3XO00571 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.21□□□□□ -1.12e-13■□□□□ 9.3
DDX3XO00571 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.19□□□□□ -1.12e-13■□□□□ 9.3
DDX3XO00571 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.13□□□□□ -1.112e-13■□□□□ 9.3
DDX3XO00571 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.11□□□□□ -1.112e-13■□□□□ 9.3
DDX3XO00571 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.08□□□□□ -1.122e-13■□□□□ 9.3
DDX3XO00571 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.8□□□□□ -1.162e-13■□□□□ 9.3
DDX3XO00571 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.7□□□□□ -1.182e-13■□□□□ 9.3
DDX3XO00571 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.45□□□□□ -1.222e-13■□□□□ 9.3
DDX3XO00571 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.18□□□□□ -1.262e-13■□□□□ 9.3
DDX3XO00571 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.16□□□□□ -1.262e-13■□□□□ 9.3
DDX3XO00571 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.16□□□□□ -1.262e-13■□□□□ 9.3
DDX3XO00571 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.72□□□□□ -1.332e-13■□□□□ 9.3
DDX3XO00571 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.72□□□□□ -1.332e-13■□□□□ 9.3
DDX3XO00571 FDPS-208ENST00000470171 746 ntTSL 215.81■□□□□ 0.127e-12■□□□□ 9.3
DDX3XO00571 CBX3-208ENST00000497498 922 ntTSL 25.73□□□□□ -1.492e-29■□□□□ 9.3
DDX3XO00571 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.63□□□□□ -1.199e-10■□□□□ 9.3
DDX3XO00571 SLC35E2B-201ENST00000480991 2860 ntTSL 215.67■□□□□ 0.14e-6■□□□□ 9.3
DDX3XO00571 SERPINA1-210ENST00000489769 1562 ntTSL 1 (best)11.96□□□□□ -0.51e-323■□□□□ 9.3
DDX3XO00571 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.029e-8■□□□□ 9.3
DDX3XO00571 EIF4EBP1-202ENST00000520657 695 ntTSL 311.96□□□□□ -0.499e-8■□□□□ 9.3
DDX3XO00571 PXMP2-202ENST00000428960 762 ntTSL 316.45■□□□□ 0.222e-10■□□□□ 9.3
DDX3XO00571 PXMP2-204ENST00000539093 516 ntTSL 315.68■□□□□ 0.12e-10■□□□□ 9.3
DDX3XO00571 CEP95-209ENST00000579860 895 ntTSL 515.5■□□□□ 0.072e-10■□□□□ 9.3
DDX3XO00571 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -02e-10■□□□□ 9.3
DDX3XO00571 CEP95-210ENST00000580188 575 ntAPPRIS ALT2 TSL 414.17□□□□□ -0.142e-10■□□□□ 9.3
DDX3XO00571 APOBEC3C-201ENST00000361441 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.582e-10■□□□□ 9.3
DDX3XO00571 APOBEC3C-202ENST00000428892 1056 ntTSL 311.14□□□□□ -0.632e-10■□□□□ 9.3
DDX3XO00571 CEP95-203ENST00000556440 3139 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.672e-10■□□□□ 9.3
DDX3XO00571 DMXL1-209ENST00000510924 530 ntTSL 510.18□□□□□ -0.782e-10■□□□□ 9.3
DDX3XO00571 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.982e-10■□□□□ 9.3
DDX3XO00571 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.83□□□□□ -1.322e-10■□□□□ 9.3
DDX3XO00571 CEP95-202ENST00000553956 2669 ntTSL 1 (best)3.95□□□□□ -1.782e-10■□□□□ 9.3
DDX3XO00571 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.812e-10■□□□□ 9.3
DDX3XO00571 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.31e-323■□□□□ 9.3
DDX3XO00571 NPM1-208ENST00000521672 597 ntTSL 58.56□□□□□ -1.041e-323■□□□□ 9.3
DDX3XO00571 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.131e-323■□□□□ 9.3
DDX3XO00571 NPM1-211ENST00000523622 247 ntTSL 36.73□□□□□ -1.331e-323■□□□□ 9.3
DDX3XO00571 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.54□□□□□ -1.361e-323■□□□□ 9.3
DDX3XO00571 NPM1-205ENST00000518587 670 ntTSL 26.14□□□□□ -1.431e-323■□□□□ 9.3
DDX3XO00571 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.89□□□□□ -1.471e-323■□□□□ 9.3
DDX3XO00571 NPM1-210ENST00000523339 268 ntTSL 23.68□□□□□ -1.821e-323■□□□□ 9.3
DDX3XO00571 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.86■□□□□ 0.934e-7■□□□□ 9.3
DDX3XO00571 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.764e-7■□□□□ 9.3
DDX3XO00571 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.14■□□□□ 0.654e-7■□□□□ 9.3
DDX3XO00571 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.74■□□□□ 0.114e-7■□□□□ 9.3
DDX3XO00571 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.5■■□□□ 1.192e-8■□□□□ 9.3
DDX3XO00571 FADS1-208ENST00000473263 574 ntTSL 421.47■■□□□ 1.032e-8■□□□□ 9.3
DDX3XO00571 YARS-207ENST00000481895 1018 ntTSL 520.59■□□□□ 0.893e-21■□□□□ 9.3
DDX3XO00571 CLPB-205ENST00000535477 2047 ntTSL 520.3■□□□□ 0.842e-8■□□□□ 9.3
DDX3XO00571 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.2■□□□□ 0.822e-8■□□□□ 9.3
DDX3XO00571 CLPB-206ENST00000535990 2203 ntTSL 220.15■□□□□ 0.822e-8■□□□□ 9.3
DDX3XO00571 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.06■□□□□ 0.82e-8■□□□□ 9.3
DDX3XO00571 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.51■□□□□ 0.712e-8■□□□□ 9.3
DDX3XO00571 FADS1-218ENST00000544696 567 ntTSL 318.95■□□□□ 0.622e-8■□□□□ 9.3
DDX3XO00571 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.622e-8■□□□□ 9.3
DDX3XO00571 FADS1-219ENST00000545245 709 ntTSL 417.74■□□□□ 0.432e-8■□□□□ 9.3
DDX3XO00571 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.62■□□□□ 0.412e-8■□□□□ 9.3
DDX3XO00571 PGD-207ENST00000491493 806 ntTSL 517.55■□□□□ 0.42e-8■□□□□ 9.3
DDX3XO00571 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.313e-21■□□□□ 9.3
DDX3XO00571 ERBB2-214ENST00000583038 4930 ntTSL 216.84■□□□□ 0.294e-11■□□□□ 9.3
DDX3XO00571 PGD-204ENST00000477958 508 ntTSL 316.72■□□□□ 0.272e-8■□□□□ 9.3
DDX3XO00571 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.48■□□□□ 0.232e-8■□□□□ 9.3
DDX3XO00571 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.212e-8■□□□□ 9.3
DDX3XO00571 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.86■□□□□ 0.132e-8■□□□□ 9.3
DDX3XO00571 FADS1-207ENST00000466716 640 ntTSL 515.85■□□□□ 0.132e-8■□□□□ 9.3
DDX3XO00571 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.124e-11■□□□□ 9.3
DDX3XO00571 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.122e-8■□□□□ 9.3
DDX3XO00571 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.062e-8■□□□□ 9.3
DDX3XO00571 BCAR1-214ENST00000563700 576 ntTSL 415.03■□□□□ -01e-13■□□□□ 9.3
DDX3XO00571 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC15□□□□□ -0.014e-11■□□□□ 9.3
DDX3XO00571 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.092e-8■□□□□ 9.3
DDX3XO00571 PGD-206ENST00000487775 462 ntTSL 214.15□□□□□ -0.142e-8■□□□□ 9.3
DDX3XO00571 CDCA3-210ENST00000545368 619 ntTSL 313.7□□□□□ -0.224e-11■□□□□ 9.3
DDX3XO00571 FADS1-214ENST00000540767 742 ntTSL 313.37□□□□□ -0.272e-8■□□□□ 9.3
DDX3XO00571 PGD-203ENST00000465632 642 ntTSL 213.23□□□□□ -0.292e-8■□□□□ 9.3
DDX3XO00571 PGD-202ENST00000460189 767 ntTSL 213.13□□□□□ -0.312e-8■□□□□ 9.3
DDX3XO00571 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.313e-8■□□□□ 9.3
DDX3XO00571 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.352e-23■□□□□ 9.3
DDX3XO00571 CLPB-201ENST00000294053 3240 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.352e-8■□□□□ 9.3
DDX3XO00571 CLPB-204ENST00000445069 815 ntTSL 512.76□□□□□ -0.372e-8■□□□□ 9.3
DDX3XO00571 FADS1-220ENST00000545405 582 ntTSL 212.66□□□□□ -0.382e-8■□□□□ 9.3
DDX3XO00571 CLPB-203ENST00000437826 3379 ntTSL 2 BASIC12.36□□□□□ -0.432e-8■□□□□ 9.3
DDX3XO00571 CDCA3-206ENST00000536241 1490 ntTSL 512.24□□□□□ -0.454e-11■□□□□ 9.3
DDX3XO00571 TMEM263-202ENST00000547081 833 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.472e-8■□□□□ 9.3
DDX3XO00571 PGD-205ENST00000483936 680 ntTSL 511.89□□□□□ -0.512e-8■□□□□ 9.3
DDX3XO00571 HS1BP3-202ENST00000402541 4358 ntTSL 1 (best) BASIC11.69□□□□□ -0.542e-8■□□□□ 9.3
DDX3XO00571 CDCA3-201ENST00000229265 1047 ntTSL 2 BASIC11.46□□□□□ -0.574e-11■□□□□ 9.3
DDX3XO00571 CDCA3-203ENST00000446553 646 ntTSL 211.44□□□□□ -0.584e-11■□□□□ 9.3
Retrieved 100 of 47,714 protein–RNA pairs in 659.9 ms