RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 DCAF8L2P0C7V8 631 aa15.23■□□□□ 0.03
CTNND1-201ENST00000358694 PELP1Q8IZL8 1130 aaKnown RBP14.42□□□□□ -0.1
CTNND1-201ENST00000358694 EHMT2Q96KQ7 1210 aa14.16□□□□□ -0.14
CTNND1-201ENST00000358694 SUPT5HO00267 1087 aaKnown RBP14.14□□□□□ -0.15
CTNND1-201ENST00000358694 APLP2Q06481 763 aa14□□□□□ -0.17
CTNND1-201ENST00000358694 FAM9AQ8IZU1 332 aaPredicted RBP13.99□□□□□ -0.17
CTNND1-201ENST00000358694 ERICH6Q7L0X2 663 aa13.94□□□□□ -0.18
CTNND1-201ENST00000358694 CCER1Q8TC90 406 aaPredicted RBP13.79□□□□□ -0.2
CTNND1-201ENST00000358694 TTBK1Q5TCY1 1321 aaPredicted RBP13.69□□□□□ -0.22
CTNND1-201ENST00000358694 SHROOM4Q9ULL8 1493 aa13.64□□□□□ -0.23
CTNND1-201ENST00000358694 ATP1B4Q9UN42 357 aaPredicted RBP13.55□□□□□ -0.24
CTNND1-201ENST00000358694 RANGAP1P46060 587 aaPredicted RBP13.54□□□□□ -0.24
CTNND1-201ENST00000358694 CENPBP07199 599 aaPredicted RBP13.46□□□□□ -0.25
CTNND1-201ENST00000358694 PCGF6Q9BYE7 350 aa13.45□□□□□ -0.26
CTNND1-201ENST00000358694 NEFLP07196 543 aa13.42□□□□□ -0.26
CTNND1-201ENST00000358694 MYT1Q01538 1121 aa13.37□□□□□ -0.27
CTNND1-201ENST00000358694 DAXXQ9UER7 740 aaPredicted RBP13.31□□□□□ -0.28
CTNND1-201ENST00000358694 MYT1LQ9UL68 1186 aa13.28□□□□□ -0.28
CTNND1-201ENST00000358694 YTHDC1Q96MU7 727 aaKnown RBP13.22□□□□□ -0.29
CTNND1-201ENST00000358694 POLR3GLQ9BT43 218 aa13.14□□□□□ -0.31
CTNND1-201ENST00000358694 ZEB1P37275 1124 aaPredicted RBP13.13□□□□□ -0.31
CTNND1-201ENST00000358694 UBTFP17480 764 aaKnown RBP13.12□□□□□ -0.31
CTNND1-201ENST00000358694 CHIC1Q5VXU3 224 aa13.09□□□□□ -0.31
CTNND1-201ENST00000358694 SLC4A1APQ9BWU0 796 aaKnown RBP13.05□□□□□ -0.32
CTNND1-201ENST00000358694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
CTNND1-201ENST00000358694 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
CTNND1-201ENST00000358694 TRIM41Q8WV44 630 aa13.02□□□□□ -0.33
CTNND1-201ENST00000358694 CNGB1Q14028 1251 aaPredicted RBP13□□□□□ -0.33
CTNND1-201ENST00000358694 NISCHQ9Y2I1 1504 aa12.97□□□□□ -0.33
CTNND1-201ENST00000358694 CLSPNQ9HAW4 1339 aa12.94□□□□□ -0.34
CTNND1-201ENST00000358694 ZNF316A6NFI3 1004 aaPredicted RBP12.94□□□□□ -0.34
CTNND1-201ENST00000358694 ITGAEP38570 1179 aa12.88□□□□□ -0.35
CTNND1-201ENST00000358694 PPARGC1BQ86YN6 1023 aaKnown RBP12.83□□□□□ -0.36
CTNND1-201ENST00000358694 RTL5Q5HYW3 569 aaPredicted RBP12.82□□□□□ -0.36
CTNND1-201ENST00000358694 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
CTNND1-201ENST00000358694 SLC24A1O60721 1099 aa12.73□□□□□ -0.37
CTNND1-201ENST00000358694 BCL11AQ9H165 835 aa12.66□□□□□ -0.38
CTNND1-201ENST00000358694 BCANQ96GW7 911 aa12.55□□□□□ -0.4
CTNND1-201ENST00000358694 CANXP27824 592 aaKnown RBP12.5□□□□□ -0.41
CTNND1-201ENST00000358694 TRIM52Q96A61 297 aa12.5□□□□□ -0.41
CTNND1-201ENST00000358694 NEFMP07197 916 aa12.48□□□□□ -0.41
CTNND1-201ENST00000358694 TRIM26Q12899 539 aaPredicted RBP12.47□□□□□ -0.41
CTNND1-201ENST00000358694 ZNF326Q5BKZ1 582 aaKnown RBP12.45□□□□□ -0.42
CTNND1-201ENST00000358694 FAM50AQ14320 339 aaKnown RBP12.43□□□□□ -0.42
CTNND1-201ENST00000358694 HRCP23327 699 aa12.43□□□□□ -0.42
CTNND1-201ENST00000358694 NEUROD1Q13562 356 aa12.36□□□□□ -0.43
CTNND1-201ENST00000358694 CDK11AQ9UQ88 783 aaPredicted RBP12.34□□□□□ -0.43
CTNND1-201ENST00000358694 ANP32BQ92688 251 aaKnown RBP12.31□□□□□ -0.44
CTNND1-201ENST00000358694 ANP32CO43423 234 aa12.28□□□□□ -0.44
CTNND1-201ENST00000358694 PLPPR3Q6T4P5 718 aa12.28□□□□□ -0.44
CTNND1-201ENST00000358694 CDK11BP21127 795 aaKnown RBP12.27□□□□□ -0.45
CTNND1-201ENST00000358694 FBLN2P98095 1184 aa12.27□□□□□ -0.45
CTNND1-201ENST00000358694 ESF1Q9H501 851 aaKnown RBP12.27□□□□□ -0.45
CTNND1-201ENST00000358694 HSP90AA1P07900 732 aaKnown RBP12.26□□□□□ -0.45
CTNND1-201ENST00000358694 DIEXFQ68CQ4 756 aaKnown RBP12.26□□□□□ -0.45
CTNND1-201ENST00000358694 NPM2Q86SE8 214 aaKnown RBP12.22□□□□□ -0.45
CTNND1-201ENST00000358694 EIF5BO60841 1220 aaKnown RBP12.21□□□□□ -0.46
CTNND1-201ENST00000358694 ANP32AP39687 249 aaKnown RBP12.2□□□□□ -0.46
CTNND1-201ENST00000358694 A0A0G2JS52 829 aa12.18□□□□□ -0.46
CTNND1-201ENST00000358694 STAG3Q9UJ98 1225 aa12.18□□□□□ -0.46
CTNND1-201ENST00000358694 LOC105371045A0A1W2PR82 267 aa12.16□□□□□ -0.46
CTNND1-201ENST00000358694 SCAF1Q9H7N4 1312 aaKnown RBP12.14□□□□□ -0.47
CTNND1-201ENST00000358694 CHGAP10645 457 aaKnown RBP12.11□□□□□ -0.47
CTNND1-201ENST00000358694 UPF2Q9HAU5 1272 aaKnown RBP12.11□□□□□ -0.47
CTNND1-201ENST00000358694 ARID3CA6NKF2 412 aa12.09□□□□□ -0.47
CTNND1-201ENST00000358694 ZNF777Q9ULD5 760 aaPredicted RBP12.07□□□□□ -0.48
CTNND1-201ENST00000358694 GLIPR1L2Q4G1C9 344 aa12.05□□□□□ -0.48
CTNND1-201ENST00000358694 TULP1O00294 542 aaPredicted RBP12.03□□□□□ -0.48
CTNND1-201ENST00000358694 GTF3C3Q9Y5Q9 886 aa12.03□□□□□ -0.48
CTNND1-201ENST00000358694 ARXQ96QS3 562 aa12.02□□□□□ -0.49
CTNND1-201ENST00000358694 ZBTB7CA1YPR0 619 aa11.98□□□□□ -0.49
CTNND1-201ENST00000358694 PLEKHG5O94827 1062 aa11.98□□□□□ -0.49
CTNND1-201ENST00000358694 P3H3Q8IVL6 736 aa11.94□□□□□ -0.5
CTNND1-201ENST00000358694 NPM1P06748 294 aaKnown RBP eCLIP11.94□□□□□ -0.5
CTNND1-201ENST00000358694 SALL2Q9Y467 1007 aaPredicted RBP11.94□□□□□ -0.5
CTNND1-201ENST00000358694 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.93□□□□□ -0.5
CTNND1-201ENST00000358694 MYH16Q9H6N6 1097 aa11.91□□□□□ -0.5
CTNND1-201ENST00000358694 C14orf37Q86TY3 774 aa11.91□□□□□ -0.5
CTNND1-201ENST00000358694 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.51
CTNND1-201ENST00000358694 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
CTNND1-201ENST00000358694 NCLP19338 710 aaKnown RBP11.87□□□□□ -0.51
CTNND1-201ENST00000358694 PABPN1Q86U42 306 aaKnown RBP eCLIP11.87□□□□□ -0.514e-7■□□□□ 8.4
CTNND1-201ENST00000358694 ZRSR1Q15695 479 aaKnown RBP11.85□□□□□ -0.51
CTNND1-201ENST00000358694 FAM9BQ8IZU0 186 aa11.85□□□□□ -0.51
CTNND1-201ENST00000358694 WDR43Q15061 677 aaKnown RBP eCLIP11.85□□□□□ -0.513e-9■■■□□ 15.6
CTNND1-201ENST00000358694 NBR1Q14596 966 aa11.83□□□□□ -0.51
CTNND1-201ENST00000358694 FKBP8Q14318 412 aa11.83□□□□□ -0.52
CTNND1-201ENST00000358694 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.82□□□□□ -0.521e-8■■□□□ 13.5
CTNND1-201ENST00000358694 NPHP1O15259 732 aa11.82□□□□□ -0.52
CTNND1-201ENST00000358694 HNRNPUQ00839 825 aaKnown RBP eCLIP11.81□□□□□ -0.52
CTNND1-201ENST00000358694 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
CTNND1-201ENST00000358694 SENP3Q9H4L4 574 aaPredicted RBP11.8□□□□□ -0.52
CTNND1-201ENST00000358694 TPRNQ4KMQ1 711 aa11.79□□□□□ -0.52
CTNND1-201ENST00000358694 TMC1Q8TDI8 760 aa11.78□□□□□ -0.52
CTNND1-201ENST00000358694 TRIM44Q96DX7 344 aaPredicted RBP11.77□□□□□ -0.52
CTNND1-201ENST00000358694 TAOK2Q9UL54 1235 aa11.77□□□□□ -0.53
CTNND1-201ENST00000358694 TONSLQ96HA7 1378 aa11.76□□□□□ -0.53
CTNND1-201ENST00000358694 PPP1R15AO75807 674 aaPredicted RBP11.76□□□□□ -0.53
CTNND1-201ENST00000358694 CLSTN1O94985 981 aa11.76□□□□□ -0.53
CTNND1-201ENST00000358694 TNNT2P45379 298 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms