RNA–Protein interactions for RNA: ENST00000518587.1

NPM1-205, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-205ENST00000518587 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
NPM1-205ENST00000518587 CHIC1Q5VXU3 224 aa22.85■■□□□ 1.25
NPM1-205ENST00000518587 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
NPM1-205ENST00000518587 SENP3Q9H4L4 574 aaPredicted RBP19.8■□□□□ 0.76
NPM1-205ENST00000518587 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
NPM1-205ENST00000518587 FOXD1Q16676 465 aa18.41■□□□□ 0.54
NPM1-205ENST00000518587 PPP6R1Q9UPN7 881 aa17.77■□□□□ 0.44
NPM1-205ENST00000518587 ADRA2BP18089 450 aa17.73■□□□□ 0.43
NPM1-205ENST00000518587 PIAS4Q8N2W9 510 aaPredicted RBP17.34■□□□□ 0.37
NPM1-205ENST00000518587 MSH5O43196 834 aa16.93■□□□□ 0.3
NPM1-205ENST00000518587 PPP4R3CPQ6ZMV5 832 aa16.36■□□□□ 0.21
NPM1-205ENST00000518587 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
NPM1-205ENST00000518587 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
NPM1-205ENST00000518587 KCNA4P22459 653 aa16.02■□□□□ 0.16
NPM1-205ENST00000518587 NCBP3Q53F19 620 aaKnown RBP15.91■□□□□ 0.14
NPM1-205ENST00000518587 CNKSR2Q8WXI2 1034 aa15.89■□□□□ 0.13
NPM1-205ENST00000518587 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
NPM1-205ENST00000518587 NPM3O75607 178 aaKnown RBP15.72■□□□□ 0.11
NPM1-205ENST00000518587 RNF216Q9NWF9 866 aaPredicted RBP15.57■□□□□ 0.08
NPM1-205ENST00000518587 HOXD11P31277 338 aaPredicted RBP15.51■□□□□ 0.07
NPM1-205ENST00000518587 NISCHQ9Y2I1 1504 aa15.46■□□□□ 0.07
NPM1-205ENST00000518587 POTEDQ86YR6 584 aa15.41■□□□□ 0.06
NPM1-205ENST00000518587 DNAJC5BQ9UF47 199 aa15.25■□□□□ 0.03
NPM1-205ENST00000518587 SLC4A1APQ9BWU0 796 aaKnown RBP15.23■□□□□ 0.03
NPM1-205ENST00000518587 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
NPM1-205ENST00000518587 SLC4A2P04920 1241 aa14.85□□□□□ -0.03
NPM1-205ENST00000518587 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
NPM1-205ENST00000518587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.77□□□□□ -0.052e-17■■□□□ 11.8
NPM1-205ENST00000518587 ZBTB22O15209 634 aa14.76□□□□□ -0.05
NPM1-205ENST00000518587 FOXD4L1Q9NU39 408 aa14.71□□□□□ -0.05
NPM1-205ENST00000518587 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
NPM1-205ENST00000518587 U3KPZ7 1027 aaPredicted RBP14.55□□□□□ -0.08
NPM1-205ENST00000518587 RNF39Q9H2S5 420 aa14.53□□□□□ -0.08
NPM1-205ENST00000518587 MYCNP04198 464 aaPredicted RBP14.49□□□□□ -0.09
NPM1-205ENST00000518587 C1QBPQ07021 282 aaKnown RBP14.35□□□□□ -0.11
NPM1-205ENST00000518587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
NPM1-205ENST00000518587 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.12
NPM1-205ENST00000518587 SAMD1Q6SPF0 538 aaPredicted RBP14.29□□□□□ -0.12
NPM1-205ENST00000518587 ATXN8OSP0DMR3 200 aa14.2□□□□□ -0.14
NPM1-205ENST00000518587 APLP2Q06481 763 aa14.15□□□□□ -0.14
NPM1-205ENST00000518587 SPINK5Q9NQ38 1064 aaPredicted RBP14.15□□□□□ -0.14
NPM1-205ENST00000518587 ATF5Q9Y2D1 282 aaPredicted RBP14.15□□□□□ -0.14
NPM1-205ENST00000518587 CACNB1Q02641 598 aaPredicted RBP14.12□□□□□ -0.15
NPM1-205ENST00000518587 CAPN15O75808 1086 aa14.06□□□□□ -0.16
NPM1-205ENST00000518587 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
NPM1-205ENST00000518587 CCDC180Q9P1Z9 1646 aa13.98□□□□□ -0.17
NPM1-205ENST00000518587 ZNF219Q9P2Y4 722 aaPredicted RBP13.98□□□□□ -0.17
NPM1-205ENST00000518587 DSG3P32926 999 aa13.85□□□□□ -0.19
NPM1-205ENST00000518587 ABCB7O75027 752 aa13.81□□□□□ -0.2
NPM1-205ENST00000518587 POLA2Q14181 598 aa13.8□□□□□ -0.2
NPM1-205ENST00000518587 ABCC9O60706 1549 aa13.8□□□□□ -0.2
NPM1-205ENST00000518587 MKRN4PQ13434 485 aaPredicted RBP13.53□□□□□ -0.24
NPM1-205ENST00000518587 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
NPM1-205ENST00000518587 FBLN2P98095 1184 aa13.49□□□□□ -0.25
NPM1-205ENST00000518587 OSCARQ8IYS5 282 aa13.32□□□□□ -0.28
NPM1-205ENST00000518587 RB1CC1Q8TDY2 1594 aa13.29□□□□□ -0.28
NPM1-205ENST00000518587 FKBP8Q14318 412 aa13.25□□□□□ -0.29
NPM1-205ENST00000518587 NACADO15069 1562 aa13.22□□□□□ -0.29
NPM1-205ENST00000518587 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
NPM1-205ENST00000518587 SPDYE2BA6NHP3 402 aa13.19□□□□□ -0.3
NPM1-205ENST00000518587 SPDYE6P0CI01 402 aa13.19□□□□□ -0.3
NPM1-205ENST00000518587 SPDYE2Q495Y8 402 aa13.19□□□□□ -0.3
NPM1-205ENST00000518587 ZNF692Q9BU19 519 aaPredicted RBP13.15□□□□□ -0.3
NPM1-205ENST00000518587 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
NPM1-205ENST00000518587 MYO15BQ96JP2 1530 aa13.1□□□□□ -0.31
NPM1-205ENST00000518587 SSUH2Q9Y2M2 353 aa13.1□□□□□ -0.31
NPM1-205ENST00000518587 PROM2Q8N271 834 aa13.02□□□□□ -0.33
NPM1-205ENST00000518587 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
NPM1-205ENST00000518587 PABPN1Q86U42 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
NPM1-205ENST00000518587 DCAF8L2P0C7V8 631 aa12.93□□□□□ -0.34
NPM1-205ENST00000518587 REM2Q8IYK8 340 aaPredicted RBP12.91□□□□□ -0.34
NPM1-205ENST00000518587 DCAF1Q9Y4B6 1507 aa12.9□□□□□ -0.34
NPM1-205ENST00000518587 SHROOM4Q9ULL8 1493 aa12.88□□□□□ -0.35
NPM1-205ENST00000518587 UNC13AQ9UPW8 1703 aa12.84□□□□□ -0.35
NPM1-205ENST00000518587 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.36
NPM1-205ENST00000518587 SPDYE1Q8NFV5 336 aaPredicted RBP12.78□□□□□ -0.36
NPM1-205ENST00000518587 BICRAQ9NZM4 1560 aa12.76□□□□□ -0.37
NPM1-205ENST00000518587 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
NPM1-205ENST00000518587 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
NPM1-205ENST00000518587 FBXO3Q9UK99 471 aa12.75□□□□□ -0.37
NPM1-205ENST00000518587 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
NPM1-205ENST00000518587 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
NPM1-205ENST00000518587 CHRDL2Q6WN34 429 aa12.62□□□□□ -0.39
NPM1-205ENST00000518587 VASPP50552 380 aaPredicted RBP12.59□□□□□ -0.39
NPM1-205ENST00000518587 SCRIBQ14160 1630 aa12.56□□□□□ -0.4
NPM1-205ENST00000518587 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.41
NPM1-205ENST00000518587 MIER1Q8N108 512 aa12.52□□□□□ -0.41
NPM1-205ENST00000518587 EIF4G1Q04637 1599 aaKnown RBP12.51□□□□□ -0.41
NPM1-205ENST00000518587 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
NPM1-205ENST00000518587 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
NPM1-205ENST00000518587 CECR2Q9BXF3 1484 aa12.5□□□□□ -0.41
NPM1-205ENST00000518587 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
NPM1-205ENST00000518587 PIP4P2Q8N4L2 257 aa12.48□□□□□ -0.41
NPM1-205ENST00000518587 CHADLQ6NUI6 762 aa12.45□□□□□ -0.42
NPM1-205ENST00000518587 IFNLR1Q8IU57 520 aaPredicted RBP12.45□□□□□ -0.42
NPM1-205ENST00000518587 PRKAR2AP13861 404 aaKnown RBP12.42□□□□□ -0.42
NPM1-205ENST00000518587 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
NPM1-205ENST00000518587 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
NPM1-205ENST00000518587 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
NPM1-205ENST00000518587 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms