RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 NISCHQ9Y2I1 1504 aa12.78□□□□□ -0.36
CTNND1-218ENST00000528232 DCAF8L2P0C7V8 631 aa12.38□□□□□ -0.43
CTNND1-218ENST00000528232 MYT1Q01538 1121 aa12.06□□□□□ -0.48
CTNND1-218ENST00000528232 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
CTNND1-218ENST00000528232 SUPT5HO00267 1087 aaKnown RBP11.91□□□□□ -0.5
CTNND1-218ENST00000528232 SHROOM4Q9ULL8 1493 aa11.83□□□□□ -0.52
CTNND1-218ENST00000528232 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
CTNND1-218ENST00000528232 APLP2Q06481 763 aa11.19□□□□□ -0.62
CTNND1-218ENST00000528232 FAM9AQ8IZU1 332 aaPredicted RBP11.15□□□□□ -0.62
CTNND1-218ENST00000528232 TTBK1Q5TCY1 1321 aaPredicted RBP11.12□□□□□ -0.63
CTNND1-218ENST00000528232 TRIM41Q8WV44 630 aa11.12□□□□□ -0.63
CTNND1-218ENST00000528232 PCGF6Q9BYE7 350 aa11.09□□□□□ -0.63
CTNND1-218ENST00000528232 CCER1Q8TC90 406 aaPredicted RBP11.06□□□□□ -0.64
CTNND1-218ENST00000528232 CENPBP07199 599 aaPredicted RBP11.06□□□□□ -0.64
CTNND1-218ENST00000528232 ZEB1P37275 1124 aaPredicted RBP11.01□□□□□ -0.65
CTNND1-218ENST00000528232 ERICH6Q7L0X2 663 aa10.98□□□□□ -0.65
CTNND1-218ENST00000528232 UBTFP17480 764 aaKnown RBP10.88□□□□□ -0.67
CTNND1-218ENST00000528232 RANGAP1P46060 587 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-218ENST00000528232 CHIC1Q5VXU3 224 aa10.82□□□□□ -0.68
CTNND1-218ENST00000528232 YTHDC1Q96MU7 727 aaKnown RBP10.81□□□□□ -0.68
CTNND1-218ENST00000528232 TRIM26Q12899 539 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-218ENST00000528232 ATP1B4Q9UN42 357 aaPredicted RBP10.73□□□□□ -0.69
CTNND1-218ENST00000528232 CCDC180Q9P1Z9 1646 aa10.71□□□□□ -0.69
CTNND1-218ENST00000528232 ABCC9O60706 1549 aa10.71□□□□□ -0.7
CTNND1-218ENST00000528232 HRCP23327 699 aa10.68□□□□□ -0.7
CTNND1-218ENST00000528232 LOC105371045A0A1W2PR82 267 aa10.67□□□□□ -0.7
CTNND1-218ENST00000528232 ZCCHC6Q5VYS8 1495 aaKnown RBP10.65□□□□□ -0.7
CTNND1-218ENST00000528232 PPARGC1BQ86YN6 1023 aaKnown RBP10.64□□□□□ -0.71
CTNND1-218ENST00000528232 NEFLP07196 543 aa10.57□□□□□ -0.72
CTNND1-218ENST00000528232 AEBP2Q6ZN18 517 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-218ENST00000528232 SCRIBQ14160 1630 aa10.5□□□□□ -0.73
CTNND1-218ENST00000528232 PABPN1Q86U42 306 aaKnown RBP eCLIP10.49□□□□□ -0.734e-7■□□□□ 8.4
CTNND1-218ENST00000528232 HNRNPUL2Q1KMD3 747 aaKnown RBP10.45□□□□□ -0.74
CTNND1-218ENST00000528232 ITGAEP38570 1179 aa10.43□□□□□ -0.74
CTNND1-218ENST00000528232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.38□□□□□ -0.75
CTNND1-218ENST00000528232 DAXXQ9UER7 740 aaPredicted RBP10.35□□□□□ -0.75
CTNND1-218ENST00000528232 MYT1LQ9UL68 1186 aa10.33□□□□□ -0.76
CTNND1-218ENST00000528232 RTL5Q5HYW3 569 aaPredicted RBP10.33□□□□□ -0.76
CTNND1-218ENST00000528232 DCAF1Q9Y4B6 1507 aa10.3□□□□□ -0.76
CTNND1-218ENST00000528232 GLIPR1L2Q4G1C9 344 aa10.3□□□□□ -0.76
CTNND1-218ENST00000528232 DIEXFQ68CQ4 756 aaKnown RBP10.29□□□□□ -0.76
CTNND1-218ENST00000528232 RB1CC1Q8TDY2 1594 aa10.29□□□□□ -0.76
CTNND1-218ENST00000528232 CSRNP3Q8WYN3 585 aa10.28□□□□□ -0.76
CTNND1-218ENST00000528232 FAM50AQ14320 339 aaKnown RBP10.28□□□□□ -0.76
CTNND1-218ENST00000528232 NACADO15069 1562 aa10.25□□□□□ -0.77
CTNND1-218ENST00000528232 POLR3GLQ9BT43 218 aa10.22□□□□□ -0.77
CTNND1-218ENST00000528232 CLSPNQ9HAW4 1339 aa10.2□□□□□ -0.78
CTNND1-218ENST00000528232 TRIM52Q96A61 297 aa10.17□□□□□ -0.78
CTNND1-218ENST00000528232 RSF1Q96T23 1441 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-218ENST00000528232 ZNF316A6NFI3 1004 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-218ENST00000528232 NEUROD1Q13562 356 aa10.14□□□□□ -0.79
CTNND1-218ENST00000528232 MYO15BQ96JP2 1530 aa10.1□□□□□ -0.79
CTNND1-218ENST00000528232 EEA1Q15075 1411 aa10.09□□□□□ -0.79
CTNND1-218ENST00000528232 ANP32CO43423 234 aa10.07□□□□□ -0.8
CTNND1-218ENST00000528232 P3H3Q8IVL6 736 aa10.07□□□□□ -0.8
CTNND1-218ENST00000528232 BAZ1AQ9NRL2 1556 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-218ENST00000528232 CNGB1Q14028 1251 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-218ENST00000528232 FBLN2P98095 1184 aa10.04□□□□□ -0.8
CTNND1-218ENST00000528232 GOLGA3Q08378 1498 aa10.03□□□□□ -0.8
CTNND1-218ENST00000528232 GTF3C3Q9Y5Q9 886 aa10.03□□□□□ -0.8
CTNND1-218ENST00000528232 BAZ1BQ9UIG0 1483 aaKnown RBP10.01□□□□□ -0.81
CTNND1-218ENST00000528232 CDK11AQ9UQ88 783 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-218ENST00000528232 ACIN1Q9UKV3 1341 aaKnown RBP10.01□□□□□ -0.81
CTNND1-218ENST00000528232 CLIP1P30622 1438 aa10□□□□□ -0.81
CTNND1-218ENST00000528232 SLC4A1APQ9BWU0 796 aaKnown RBP9.99□□□□□ -0.81
CTNND1-218ENST00000528232 WRNQ14191 1432 aaPredicted RBP eCLIP9.99□□□□□ -0.81
CTNND1-218ENST00000528232 CEP162Q5TB80 1403 aa9.97□□□□□ -0.81
CTNND1-218ENST00000528232 ZNF326Q5BKZ1 582 aaKnown RBP9.97□□□□□ -0.81
CTNND1-218ENST00000528232 CEP164Q9UPV0 1460 aa9.94□□□□□ -0.82
CTNND1-218ENST00000528232 ARID3CA6NKF2 412 aa9.94□□□□□ -0.82
CTNND1-218ENST00000528232 TNIKQ9UKE5 1360 aa9.94□□□□□ -0.82
CTNND1-218ENST00000528232 TONSLQ96HA7 1378 aa9.93□□□□□ -0.82
CTNND1-218ENST00000528232 CECR2Q9BXF3 1484 aa9.93□□□□□ -0.82
CTNND1-218ENST00000528232 ZNF777Q9ULD5 760 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-218ENST00000528232 EIF5BO60841 1220 aaKnown RBP9.9□□□□□ -0.82
CTNND1-218ENST00000528232 KIF27Q86VH2 1401 aa9.89□□□□□ -0.83
CTNND1-218ENST00000528232 BCANQ96GW7 911 aa9.89□□□□□ -0.83
CTNND1-218ENST00000528232 MTUS2Q5JR59 1369 aa9.88□□□□□ -0.83
CTNND1-218ENST00000528232 MROH2BQ7Z745 1585 aa9.87□□□□□ -0.83
CTNND1-218ENST00000528232 ANP32AP39687 249 aaKnown RBP9.84□□□□□ -0.83
CTNND1-218ENST00000528232 SMARCA2P51531 1590 aa9.82□□□□□ -0.84
CTNND1-218ENST00000528232 TOP2AP11388 1531 aaKnown RBP9.82□□□□□ -0.84
CTNND1-218ENST00000528232 CCDC88BA6NC98 1476 aa9.82□□□□□ -0.84
CTNND1-218ENST00000528232 ANP32EQ9BTT0 268 aa9.81□□□□□ -0.84
CTNND1-218ENST00000528232 CHIC2Q9UKJ5 165 aa9.79□□□□□ -0.84
CTNND1-218ENST00000528232 WIZO95785 1651 aa9.79□□□□□ -0.84
CTNND1-218ENST00000528232 DDX10Q13206 875 aaKnown RBP9.78□□□□□ -0.84
CTNND1-218ENST00000528232 CHMP7Q8WUX9 453 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-218ENST00000528232 ABCC8Q09428 1581 aa9.76□□□□□ -0.85
CTNND1-218ENST00000528232 SOGA1O94964 1423 aa9.76□□□□□ -0.85
CTNND1-218ENST00000528232 BCL11AQ9H165 835 aa9.76□□□□□ -0.85
CTNND1-218ENST00000528232 CANXP27824 592 aaKnown RBP9.76□□□□□ -0.85
CTNND1-218ENST00000528232 ZBTB47Q9UFB7 747 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-218ENST00000528232 TSPY4P0CV99 314 aa9.75□□□□□ -0.85
CTNND1-218ENST00000528232 TSPY10P0CW01 314 aa9.75□□□□□ -0.85
CTNND1-218ENST00000528232 NEFMP07197 916 aa9.74□□□□□ -0.85
CTNND1-218ENST00000528232 ANP32BQ92688 251 aaKnown RBP9.74□□□□□ -0.85
CTNND1-218ENST00000528232 FHAD1B1AJZ9 1412 aa9.74□□□□□ -0.85
CTNND1-218ENST00000528232 TNNT2P45379 298 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-218ENST00000528232 HNRNPUQ00839 825 aaKnown RBP eCLIP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms