RNA–Protein interactions for RNA: ENST00000489637.3

MVB12B-206, Transcript of multivesicular body subunit 12B, humanhuman

TSL 1 (best) BASIC

Gene MVB12B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12B-206ENST00000489637 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
MVB12B-206ENST00000489637 DCAF8L2P0C7V8 631 aa28.05■■■□□ 2.08
MVB12B-206ENST00000489637 SHROOM4Q9ULL8 1493 aa28.04■■■□□ 2.08
MVB12B-206ENST00000489637 CCDC180Q9P1Z9 1646 aa28.01■■■□□ 2.07
MVB12B-206ENST00000489637 ZCCHC6Q5VYS8 1495 aaKnown RBP27.61■■■□□ 2.01
MVB12B-206ENST00000489637 SUPT5HO00267 1087 aaKnown RBP27.17■■□□□ 1.94
MVB12B-206ENST00000489637 ABCC9O60706 1549 aa27.04■■□□□ 1.92
MVB12B-206ENST00000489637 DCAF1Q9Y4B6 1507 aa26.72■■□□□ 1.87
MVB12B-206ENST00000489637 SCRIBQ14160 1630 aa26.53■■□□□ 1.84
MVB12B-206ENST00000489637 NACADO15069 1562 aa26.16■■□□□ 1.78
MVB12B-206ENST00000489637 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.78
MVB12B-206ENST00000489637 RB1CC1Q8TDY2 1594 aa25.94■■□□□ 1.74
MVB12B-206ENST00000489637 CECR2Q9BXF3 1484 aa25.9■■□□□ 1.74
MVB12B-206ENST00000489637 PABPN1Q86U42 306 aaKnown RBP eCLIP25.9■■□□□ 1.74
MVB12B-206ENST00000489637 CHIC1Q5VXU3 224 aa25.89■■□□□ 1.73
MVB12B-206ENST00000489637 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
MVB12B-206ENST00000489637 MROH2BQ7Z745 1585 aa25.65■■□□□ 1.7
MVB12B-206ENST00000489637 UNC13AQ9UPW8 1703 aa25.56■■□□□ 1.68
MVB12B-206ENST00000489637 WIZO95785 1651 aa25.47■■□□□ 1.67
MVB12B-206ENST00000489637 BICRAQ9NZM4 1560 aa25.33■■□□□ 1.65
MVB12B-206ENST00000489637 LOC105371045A0A1W2PR82 267 aa25.32■■□□□ 1.64
MVB12B-206ENST00000489637 EHMT2Q96KQ7 1210 aa25.24■■□□□ 1.63
MVB12B-206ENST00000489637 BAZ1AQ9NRL2 1556 aaPredicted RBP25.23■■□□□ 1.63
MVB12B-206ENST00000489637 FAM9AQ8IZU1 332 aaPredicted RBP25.23■■□□□ 1.63
MVB12B-206ENST00000489637 TRIM41Q8WV44 630 aa25.2■■□□□ 1.62
MVB12B-206ENST00000489637 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
MVB12B-206ENST00000489637 CCDC88BA6NC98 1476 aa24.94■■□□□ 1.58
MVB12B-206ENST00000489637 TOP2AP11388 1531 aaKnown RBP24.89■■□□□ 1.57
MVB12B-206ENST00000489637 SMARCA2P51531 1590 aa24.8■■□□□ 1.56
MVB12B-206ENST00000489637 ABCC8Q09428 1581 aa24.75■■□□□ 1.55
MVB12B-206ENST00000489637 ATAD2BQ9ULI0 1458 aa24.74■■□□□ 1.55
MVB12B-206ENST00000489637 BAZ1BQ9UIG0 1483 aaKnown RBP24.65■■□□□ 1.54
MVB12B-206ENST00000489637 EIF4G1Q04637 1599 aaKnown RBP24.6■■□□□ 1.53
MVB12B-206ENST00000489637 PCGF6Q9BYE7 350 aa24.55■■□□□ 1.52
MVB12B-206ENST00000489637 PEG3Q9GZU2 1588 aa24.53■■□□□ 1.52
MVB12B-206ENST00000489637 SOGA1O94964 1423 aa24.41■■□□□ 1.5
MVB12B-206ENST00000489637 PPARGC1BQ86YN6 1023 aaKnown RBP24.39■■□□□ 1.5
MVB12B-206ENST00000489637 RUSC2Q8N2Y8 1516 aa24.37■■□□□ 1.49
MVB12B-206ENST00000489637 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
MVB12B-206ENST00000489637 NCAPD3P42695 1498 aa24.29■■□□□ 1.48
MVB12B-206ENST00000489637 DNAJC5BQ9UF47 199 aa24.2■■□□□ 1.47
MVB12B-206ENST00000489637 SYNJ1O43426 1573 aa24.2■■□□□ 1.46
MVB12B-206ENST00000489637 TTBK1Q5TCY1 1321 aaPredicted RBP24.18■■□□□ 1.46
MVB12B-206ENST00000489637 CSRNP3Q8WYN3 585 aa24.17■■□□□ 1.46
MVB12B-206ENST00000489637 UBTFP17480 764 aaKnown RBP24.17■■□□□ 1.46
MVB12B-206ENST00000489637 RANGAP1P46060 587 aaPredicted RBP24.16■■□□□ 1.46
MVB12B-206ENST00000489637 CC2D2AQ9P2K1 1620 aa24.16■■□□□ 1.46
MVB12B-206ENST00000489637 HMGXB3Q12766 1538 aa24.13■■□□□ 1.45
MVB12B-206ENST00000489637 HRCP23327 699 aa24■■□□□ 1.43
MVB12B-206ENST00000489637 TRIM26Q12899 539 aaPredicted RBP23.99■■□□□ 1.43
MVB12B-206ENST00000489637 CFTRP13569 1480 aa23.94■■□□□ 1.42
MVB12B-206ENST00000489637 CADPSQ9ULU8 1353 aa23.89■■□□□ 1.41
MVB12B-206ENST00000489637 NESP48681 1621 aa23.89■■□□□ 1.41
MVB12B-206ENST00000489637 CUX1P39880 1505 aa23.88■■□□□ 1.41
MVB12B-206ENST00000489637 CEP162Q5TB80 1403 aa23.86■■□□□ 1.41
MVB12B-206ENST00000489637 TOP2BQ02880 1626 aa23.83■■□□□ 1.4
MVB12B-206ENST00000489637 EEA1Q15075 1411 aa23.8■■□□□ 1.4
MVB12B-206ENST00000489637 TNIKQ9UKE5 1360 aa23.79■■□□□ 1.4
MVB12B-206ENST00000489637 RAPGEF2Q9Y4G8 1499 aa23.78■■□□□ 1.4
MVB12B-206ENST00000489637 GOLGA3Q08378 1498 aa23.76■■□□□ 1.39
MVB12B-206ENST00000489637 BIVM-ERCC5R4GMW8 1640 aa23.69■■□□□ 1.38
MVB12B-206ENST00000489637 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
MVB12B-206ENST00000489637 FANCD2Q9BXW9 1451 aa23.67■■□□□ 1.38
MVB12B-206ENST00000489637 CUX2O14529 1486 aa23.6■■□□□ 1.37
MVB12B-206ENST00000489637 FGD5Q6ZNL6 1462 aa23.58■■□□□ 1.37
MVB12B-206ENST00000489637 CLIP1P30622 1438 aa23.57■■□□□ 1.36
MVB12B-206ENST00000489637 KIF27Q86VH2 1401 aa23.57■■□□□ 1.36
MVB12B-206ENST00000489637 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
MVB12B-206ENST00000489637 KIF21BO75037 1637 aa23.53■■□□□ 1.36
MVB12B-206ENST00000489637 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
MVB12B-206ENST00000489637 IGF1RP08069 1367 aa23.47■■□□□ 1.35
MVB12B-206ENST00000489637 PRXQ9BXM0 1461 aa23.47■■□□□ 1.35
MVB12B-206ENST00000489637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.45■■□□□ 1.34
MVB12B-206ENST00000489637 P3H3Q8IVL6 736 aa23.42■■□□□ 1.34
MVB12B-206ENST00000489637 TOPBP1Q92547 1522 aa23.41■■□□□ 1.34
MVB12B-206ENST00000489637 TDRD9Q8NDG6 1382 aaKnown RBP23.38■■□□□ 1.33
MVB12B-206ENST00000489637 POLA1P09884 1462 aaPredicted RBP23.38■■□□□ 1.33
MVB12B-206ENST00000489637 URB2Q14146 1524 aaKnown RBP23.38■■□□□ 1.33
MVB12B-206ENST00000489637 CARMIL1Q5VZK9 1371 aa23.36■■□□□ 1.33
MVB12B-206ENST00000489637 APLP2Q06481 763 aa23.35■■□□□ 1.33
MVB12B-206ENST00000489637 HNRNPUL2Q1KMD3 747 aaKnown RBP23.31■■□□□ 1.32
MVB12B-206ENST00000489637 DNMBPQ6XZF7 1577 aa23.31■■□□□ 1.32
MVB12B-206ENST00000489637 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
MVB12B-206ENST00000489637 LAMC3Q9Y6N6 1575 aa23.3■■□□□ 1.32
MVB12B-206ENST00000489637 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
MVB12B-206ENST00000489637 ATP1B4Q9UN42 357 aaPredicted RBP23.26■■□□□ 1.31
MVB12B-206ENST00000489637 KIF21AQ7Z4S6 1674 aa23.26■■□□□ 1.31
MVB12B-206ENST00000489637 KANK4Q5T7N3 995 aaPredicted RBP23.26■■□□□ 1.31
MVB12B-206ENST00000489637 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
MVB12B-206ENST00000489637 ARAP1Q96P48 1450 aa23.25■■□□□ 1.31
MVB12B-206ENST00000489637 ZEB1P37275 1124 aaPredicted RBP23.24■■□□□ 1.31
MVB12B-206ENST00000489637 CCER1Q8TC90 406 aaPredicted RBP23.23■■□□□ 1.31
MVB12B-206ENST00000489637 ABCA10Q8WWZ4 1543 aa23.16■■□□□ 1.3
MVB12B-206ENST00000489637 ARHGAP35Q9NRY4 1499 aa23.16■■□□□ 1.3
MVB12B-206ENST00000489637 AQRO60306 1485 aaKnown RBP eCLIP23.1■■□□□ 1.294e-6■■□□□ 14
MVB12B-206ENST00000489637 ITGAEP38570 1179 aa23.05■■□□□ 1.28
MVB12B-206ENST00000489637 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
MVB12B-206ENST00000489637 FHOD3Q2V2M9 1422 aa23.01■■□□□ 1.27
MVB12B-206ENST00000489637 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
MVB12B-206ENST00000489637 ZNF608Q9ULD9 1512 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms