RNA–Protein interactions for RNA: ENST00000521672.5

NPM1-208, Transcript of nucleophosmin 1, humanhuman

TSL 5

Gene NPM1, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-208ENST00000521672 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
NPM1-208ENST00000521672 CCDC180Q9P1Z9 1646 aa17.22■□□□□ 0.35
NPM1-208ENST00000521672 AEBP2Q6ZN18 517 aaPredicted RBP16.98■□□□□ 0.31
NPM1-208ENST00000521672 ABCC9O60706 1549 aa16.65■□□□□ 0.26
NPM1-208ENST00000521672 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
NPM1-208ENST00000521672 DCAF8L2P0C7V8 631 aa16.23■□□□□ 0.19
NPM1-208ENST00000521672 ZCCHC6Q5VYS8 1495 aaKnown RBP16.22■□□□□ 0.19
NPM1-208ENST00000521672 NACADO15069 1562 aa16.21■□□□□ 0.19
NPM1-208ENST00000521672 MYO15BQ96JP2 1530 aa16.21■□□□□ 0.19
NPM1-208ENST00000521672 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
NPM1-208ENST00000521672 DCAF1Q9Y4B6 1507 aa16.17■□□□□ 0.18
NPM1-208ENST00000521672 SCRIBQ14160 1630 aa15.65■□□□□ 0.1
NPM1-208ENST00000521672 SHROOM4Q9ULL8 1493 aa15.63■□□□□ 0.09
NPM1-208ENST00000521672 PABPN1Q86U42 306 aaKnown RBP eCLIP15.61■□□□□ 0.09
NPM1-208ENST00000521672 UNC13AQ9UPW8 1703 aa15.6■□□□□ 0.09
NPM1-208ENST00000521672 BICRAQ9NZM4 1560 aa15.56■□□□□ 0.08
NPM1-208ENST00000521672 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
NPM1-208ENST00000521672 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
NPM1-208ENST00000521672 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
NPM1-208ENST00000521672 CC2D2AQ9P2K1 1620 aa15.07■□□□□ 0
NPM1-208ENST00000521672 CECR2Q9BXF3 1484 aa15.06■□□□□ 0
NPM1-208ENST00000521672 SMARCA4P51532 1647 aa15.03■□□□□ -0
NPM1-208ENST00000521672 SMARCA2P51531 1590 aa14.99□□□□□ -0.01
NPM1-208ENST00000521672 NCAPD3P42695 1498 aa14.96□□□□□ -0.01
NPM1-208ENST00000521672 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
NPM1-208ENST00000521672 MROH2BQ7Z745 1585 aa14.93□□□□□ -0.02
NPM1-208ENST00000521672 PEG3Q9GZU2 1588 aa14.93□□□□□ -0.02
NPM1-208ENST00000521672 HMGXB3Q12766 1538 aa14.88□□□□□ -0.03
NPM1-208ENST00000521672 RSF1Q96T23 1441 aaPredicted RBP14.87□□□□□ -0.03
NPM1-208ENST00000521672 BAZ1BQ9UIG0 1483 aaKnown RBP14.86□□□□□ -0.03
NPM1-208ENST00000521672 WIZO95785 1651 aa14.74□□□□□ -0.05
NPM1-208ENST00000521672 TOP2AP11388 1531 aaKnown RBP14.68□□□□□ -0.06
NPM1-208ENST00000521672 SUPT5HO00267 1087 aaKnown RBP14.62□□□□□ -0.07
NPM1-208ENST00000521672 CADPSQ9ULU8 1353 aa14.54□□□□□ -0.08
NPM1-208ENST00000521672 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.08
NPM1-208ENST00000521672 CCDC88BA6NC98 1476 aa14.5□□□□□ -0.09
NPM1-208ENST00000521672 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
NPM1-208ENST00000521672 CFTRP13569 1480 aa14.46□□□□□ -0.09
NPM1-208ENST00000521672 SENP3Q9H4L4 574 aaPredicted RBP14.46□□□□□ -0.09
NPM1-208ENST00000521672 ERCC6Q03468 1493 aa14.44□□□□□ -0.1
NPM1-208ENST00000521672 NESP48681 1621 aa14.41□□□□□ -0.1
NPM1-208ENST00000521672 PHF23Q9BUL5 403 aaPredicted RBP14.35□□□□□ -0.11
NPM1-208ENST00000521672 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
NPM1-208ENST00000521672 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
NPM1-208ENST00000521672 PRDM2Q13029 1718 aa14.26□□□□□ -0.13
NPM1-208ENST00000521672 CUX2O14529 1486 aa14.25□□□□□ -0.13
NPM1-208ENST00000521672 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
NPM1-208ENST00000521672 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
NPM1-208ENST00000521672 KIF21AQ7Z4S6 1674 aa14.23□□□□□ -0.13
NPM1-208ENST00000521672 WDR62O43379 1518 aa14.18□□□□□ -0.14
NPM1-208ENST00000521672 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
NPM1-208ENST00000521672 URB2Q14146 1524 aaKnown RBP14.12□□□□□ -0.15
NPM1-208ENST00000521672 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
NPM1-208ENST00000521672 TOPBP1Q92547 1522 aa14.1□□□□□ -0.15
NPM1-208ENST00000521672 WRNQ14191 1432 aaPredicted RBP eCLIP14.06□□□□□ -0.163e-7■■□□□ 13.1
NPM1-208ENST00000521672 IFT140Q96RY7 1462 aa14.04□□□□□ -0.16
NPM1-208ENST00000521672 CUX1P39880 1505 aa14□□□□□ -0.17
NPM1-208ENST00000521672 POLA1P09884 1462 aaPredicted RBP13.99□□□□□ -0.17
NPM1-208ENST00000521672 SOGA1O94964 1423 aa13.98□□□□□ -0.17
NPM1-208ENST00000521672 FGD5Q6ZNL6 1462 aa13.97□□□□□ -0.17
NPM1-208ENST00000521672 TOP2BQ02880 1626 aa13.97□□□□□ -0.17
NPM1-208ENST00000521672 BIVM-ERCC5R4GMW8 1640 aa13.93□□□□□ -0.18
NPM1-208ENST00000521672 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
NPM1-208ENST00000521672 SYNJ1O43426 1573 aa13.91□□□□□ -0.18
NPM1-208ENST00000521672 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.19
NPM1-208ENST00000521672 TRIM41Q8WV44 630 aa13.89□□□□□ -0.19
NPM1-208ENST00000521672 RAD54L2Q9Y4B4 1467 aa13.88□□□□□ -0.19
NPM1-208ENST00000521672 ABCA10Q8WWZ4 1543 aa13.88□□□□□ -0.19
NPM1-208ENST00000521672 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
NPM1-208ENST00000521672 TDRD9Q8NDG6 1382 aaKnown RBP13.83□□□□□ -0.19
NPM1-208ENST00000521672 AQRO60306 1485 aaKnown RBP eCLIP13.82□□□□□ -0.25e-9■■■■■ 27.9
NPM1-208ENST00000521672 GAPVD1Q14C86 1478 aa13.82□□□□□ -0.2
NPM1-208ENST00000521672 GRIN2BQ13224 1484 aa13.81□□□□□ -0.2
NPM1-208ENST00000521672 KIF27Q86VH2 1401 aa13.81□□□□□ -0.2
NPM1-208ENST00000521672 EIF4G3O43432 1585 aaKnown RBP13.8□□□□□ -0.2
NPM1-208ENST00000521672 MAGI1Q96QZ7 1491 aaPredicted RBP13.77□□□□□ -0.21
NPM1-208ENST00000521672 ABCA5Q8WWZ7 1642 aa13.75□□□□□ -0.21
NPM1-208ENST00000521672 ERICH3Q5RHP9 1530 aa13.74□□□□□ -0.21
NPM1-208ENST00000521672 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
NPM1-208ENST00000521672 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
NPM1-208ENST00000521672 SYNJ2O15056 1496 aa13.7□□□□□ -0.22
NPM1-208ENST00000521672 SNAPC4Q5SXM2 1469 aa13.7□□□□□ -0.22
NPM1-208ENST00000521672 FBLN2P98095 1184 aa13.7□□□□□ -0.22
NPM1-208ENST00000521672 FHAD1B1AJZ9 1412 aa13.69□□□□□ -0.22
NPM1-208ENST00000521672 EEA1Q15075 1411 aa13.68□□□□□ -0.22
NPM1-208ENST00000521672 IGF1RP08069 1367 aa13.68□□□□□ -0.22
NPM1-208ENST00000521672 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
NPM1-208ENST00000521672 CARMIL1Q5VZK9 1371 aa13.62□□□□□ -0.23
NPM1-208ENST00000521672 DNAJC5Q9H3Z4 198 aa13.62□□□□□ -0.23
NPM1-208ENST00000521672 CUL7Q14999 1698 aa13.62□□□□□ -0.23
NPM1-208ENST00000521672 ADAMTS12P58397 1594 aa13.61□□□□□ -0.23
NPM1-208ENST00000521672 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
NPM1-208ENST00000521672 GRIN2AQ12879 1464 aa13.6□□□□□ -0.23
NPM1-208ENST00000521672 RAPGEF2Q9Y4G8 1499 aa13.55□□□□□ -0.24
NPM1-208ENST00000521672 CHD1O14646 1710 aa13.55□□□□□ -0.24
NPM1-208ENST00000521672 NUP160Q12769 1436 aa13.54□□□□□ -0.24
NPM1-208ENST00000521672 RUSC2Q8N2Y8 1516 aa13.54□□□□□ -0.24
NPM1-208ENST00000521672 PRXQ9BXM0 1461 aa13.51□□□□□ -0.25
NPM1-208ENST00000521672 KIAA0586Q9BVV6 1533 aa13.49□□□□□ -0.25
NPM1-208ENST00000521672 FAM9AQ8IZU1 332 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms