RNA–Protein interactions for RNA: ENST00000477958.5

PGD-204, Transcript of phosphogluconate dehydrogenase, humanhuman

TSL 3

Gene PGD, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGD-204ENST00000477958 NISCHQ9Y2I1 1504 aa41.34■■■■■ 4.21
PGD-204ENST00000477958 ABCC9O60706 1549 aa37.06■■■■□ 3.52
PGD-204ENST00000477958 CCDC180Q9P1Z9 1646 aa37■■■■□ 3.51
PGD-204ENST00000477958 RB1CC1Q8TDY2 1594 aa35.33■■■■□ 3.25
PGD-204ENST00000477958 DCAF8L2P0C7V8 631 aa35.17■■■■□ 3.22
PGD-204ENST00000477958 NACADO15069 1562 aa35.09■■■■□ 3.21
PGD-204ENST00000477958 DNAJC5BQ9UF47 199 aa34.68■■■■□ 3.14
PGD-204ENST00000477958 MYO15BQ96JP2 1530 aa34.62■■■■□ 3.13
PGD-204ENST00000477958 PABPN1Q86U42 306 aaKnown RBP eCLIP34.6■■■■□ 3.13
PGD-204ENST00000477958 ZCCHC6Q5VYS8 1495 aaKnown RBP34.23■■■■□ 3.07
PGD-204ENST00000477958 UNC13AQ9UPW8 1703 aa34.21■■■■□ 3.07
PGD-204ENST00000477958 DCAF1Q9Y4B6 1507 aa34.17■■■■□ 3.06
PGD-204ENST00000477958 BICRAQ9NZM4 1560 aa34.1■■■■□ 3.05
PGD-204ENST00000477958 SHROOM4Q9ULL8 1493 aa33.88■■■■□ 3.01
PGD-204ENST00000477958 SCRIBQ14160 1630 aa33.74■■■□□ 2.99
PGD-204ENST00000477958 CECR2Q9BXF3 1484 aa33.43■■■□□ 2.94
PGD-204ENST00000477958 CC2D2AQ9P2K1 1620 aa33.41■■■□□ 2.94
PGD-204ENST00000477958 EIF4G1Q04637 1599 aaKnown RBP33.37■■■□□ 2.93
PGD-204ENST00000477958 NCAPD3P42695 1498 aa32.42■■■□□ 2.78
PGD-204ENST00000477958 ATAD2BQ9ULI0 1458 aa32.29■■■□□ 2.76
PGD-204ENST00000477958 SMARCA2P51531 1590 aa32.25■■■□□ 2.75
PGD-204ENST00000477958 SMARCA4P51532 1647 aa32.18■■■□□ 2.74
PGD-204ENST00000477958 BAZ1AQ9NRL2 1556 aaPredicted RBP32.14■■■□□ 2.74
PGD-204ENST00000477958 ERCC6Q03468 1493 aa32.13■■■□□ 2.73
PGD-204ENST00000477958 HMGXB3Q12766 1538 aa32.11■■■□□ 2.73
PGD-204ENST00000477958 BAZ1BQ9UIG0 1483 aaKnown RBP32.03■■■□□ 2.72
PGD-204ENST00000477958 CUX2O14529 1486 aa31.98■■■□□ 2.71
PGD-204ENST00000477958 DNAJC5Q9H3Z4 198 aa31.97■■■□□ 2.71
PGD-204ENST00000477958 PEG3Q9GZU2 1588 aa31.87■■■□□ 2.69
PGD-204ENST00000477958 MROH2BQ7Z745 1585 aa31.81■■■□□ 2.68
PGD-204ENST00000477958 NESP48681 1621 aa31.77■■■□□ 2.68
PGD-204ENST00000477958 LAMC3Q9Y6N6 1575 aa31.64■■■□□ 2.66
PGD-204ENST00000477958 PDS5BQ9NTI5 1447 aa31.61■■■□□ 2.65
PGD-204ENST00000477958 CADPSQ9ULU8 1353 aa31.49■■■□□ 2.63
PGD-204ENST00000477958 THOC2Q8NI27 1593 aaKnown RBP31.37■■■□□ 2.61
PGD-204ENST00000477958 WIZO95785 1651 aa31.37■■■□□ 2.61
PGD-204ENST00000477958 KIF21AQ7Z4S6 1674 aa31.27■■■□□ 2.6
PGD-204ENST00000477958 RSF1Q96T23 1441 aaPredicted RBP31.24■■■□□ 2.59
PGD-204ENST00000477958 MRC2Q9UBG0 1479 aa31.21■■■□□ 2.59
PGD-204ENST00000477958 CEP164Q9UPV0 1460 aa31.13■■■□□ 2.57
PGD-204ENST00000477958 FANCD2Q9BXW9 1451 aa31.08■■■□□ 2.57
PGD-204ENST00000477958 TOP2AP11388 1531 aaKnown RBP31.08■■■□□ 2.57
PGD-204ENST00000477958 CFTRP13569 1480 aa31.06■■■□□ 2.56
PGD-204ENST00000477958 WDR62O43379 1518 aa31.04■■■□□ 2.56
PGD-204ENST00000477958 CCDC88BA6NC98 1476 aa30.76■■■□□ 2.51
PGD-204ENST00000477958 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
PGD-204ENST00000477958 OSCARQ8IYS5 282 aa30.69■■■□□ 2.5
PGD-204ENST00000477958 TRIM41Q8WV44 630 aa30.65■■■□□ 2.5
PGD-204ENST00000477958 PRDM2Q13029 1718 aa30.55■■■□□ 2.48
PGD-204ENST00000477958 ABCC8Q09428 1581 aa30.54■■■□□ 2.48
PGD-204ENST00000477958 IFT140Q96RY7 1462 aa30.52■■■□□ 2.48
PGD-204ENST00000477958 TOPBP1Q92547 1522 aa30.45■■■□□ 2.47
PGD-204ENST00000477958 ZNF608Q9ULD9 1512 aaPredicted RBP30.34■■■□□ 2.45
PGD-204ENST00000477958 DNMBPQ6XZF7 1577 aa30.33■■■□□ 2.45
PGD-204ENST00000477958 AQRO60306 1485 aaKnown RBP eCLIP30.15■■■□□ 2.421e-7■■■■■ 57.6
PGD-204ENST00000477958 FBLN2P98095 1184 aa30.15■■■□□ 2.42
PGD-204ENST00000477958 EIF4G3O43432 1585 aaKnown RBP30.14■■■□□ 2.42
PGD-204ENST00000477958 POLA1P09884 1462 aaPredicted RBP30.13■■■□□ 2.41
PGD-204ENST00000477958 SOGA1O94964 1423 aa30.12■■■□□ 2.41
PGD-204ENST00000477958 SUPT5HO00267 1087 aaKnown RBP30.08■■■□□ 2.41
PGD-204ENST00000477958 TARBP1Q13395 1621 aaKnown RBP30.07■■■□□ 2.4
PGD-204ENST00000477958 TDRD9Q8NDG6 1382 aaKnown RBP30.03■■■□□ 2.4
PGD-204ENST00000477958 RAD54L2Q9Y4B4 1467 aa30.02■■■□□ 2.4
PGD-204ENST00000477958 RIMBP3CA6NJZ7 1639 aa29.99■■■□□ 2.39
PGD-204ENST00000477958 RIMBP3BA6NNM3 1639 aa29.99■■■□□ 2.39
PGD-204ENST00000477958 RIMBP3Q9UFD9 1639 aa29.99■■■□□ 2.39
PGD-204ENST00000477958 ARHGEF11O15085 1522 aa29.97■■■□□ 2.39
PGD-204ENST00000477958 FGD5Q6ZNL6 1462 aa29.96■■■□□ 2.39
PGD-204ENST00000477958 CHMP7Q8WUX9 453 aaPredicted RBP29.94■■■□□ 2.38
PGD-204ENST00000477958 CYB5RLQ6IPT4 315 aa29.93■■■□□ 2.38
PGD-204ENST00000477958 WDR97A6NE52 1622 aa29.89■■■□□ 2.38
PGD-204ENST00000477958 CUX1P39880 1505 aa29.89■■■□□ 2.38
PGD-204ENST00000477958 CHD1O14646 1710 aa29.85■■■□□ 2.37
PGD-204ENST00000477958 GRIN2BQ13224 1484 aa29.83■■■□□ 2.37
PGD-204ENST00000477958 SNAPC4Q5SXM2 1469 aa29.82■■■□□ 2.36
PGD-204ENST00000477958 MAGI1Q96QZ7 1491 aaPredicted RBP29.8■■■□□ 2.36
PGD-204ENST00000477958 GAPVD1Q14C86 1478 aa29.72■■■□□ 2.35
PGD-204ENST00000477958 SYNJ2O15056 1496 aa29.7■■■□□ 2.35
PGD-204ENST00000477958 SYNJ1O43426 1573 aa29.69■■■□□ 2.34
PGD-204ENST00000477958 TRHP20396 242 aaPredicted RBP29.67■■■□□ 2.34
PGD-204ENST00000477958 WRNQ14191 1432 aaPredicted RBP eCLIP29.66■■■□□ 2.34
PGD-204ENST00000477958 ARAP1Q96P48 1450 aa29.65■■■□□ 2.34
PGD-204ENST00000477958 ABCA10Q8WWZ4 1543 aa29.65■■■□□ 2.34
PGD-204ENST00000477958 CLASP1Q7Z460 1538 aa29.57■■■□□ 2.32
PGD-204ENST00000477958 PBRM1Q86U86 1689 aa29.5■■■□□ 2.31
PGD-204ENST00000477958 ABCA5Q8WWZ7 1642 aa29.47■■■□□ 2.31
PGD-204ENST00000477958 TOP2BQ02880 1626 aa29.44■■■□□ 2.3
PGD-204ENST00000477958 GRIN2AQ12879 1464 aa29.39■■■□□ 2.3
PGD-204ENST00000477958 BIVM-ERCC5R4GMW8 1640 aa29.38■■■□□ 2.29
PGD-204ENST00000477958 FHAD1B1AJZ9 1412 aa29.37■■■□□ 2.29
PGD-204ENST00000477958 ERICH3Q5RHP9 1530 aa29.29■■■□□ 2.28
PGD-204ENST00000477958 ADAMTS12P58397 1594 aa29.28■■■□□ 2.28
PGD-204ENST00000477958 NUP160Q12769 1436 aa29.27■■■□□ 2.28
PGD-204ENST00000477958 CEP170Q5SW79 1584 aa29.17■■■□□ 2.26
PGD-204ENST00000477958 JPH4Q96JJ6 628 aa29.14■■■□□ 2.26
PGD-204ENST00000477958 PRG4Q92954 1404 aaPredicted RBP29.07■■■□□ 2.24
PGD-204ENST00000477958 ERCC6L2Q5T890 1561 aa29.05■■■□□ 2.24
PGD-204ENST00000477958 KIF27Q86VH2 1401 aa29.05■■■□□ 2.24
PGD-204ENST00000477958 SHROOM2Q13796 1616 aa29.02■■■□□ 2.24
PGD-204ENST00000477958 NPM1P06748 294 aaKnown RBP eCLIP29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms