RNA–Protein interactions for RNA: ENST00000544696.5

FADS1-218, Transcript of fatty acid desaturase 1, humanhuman

TSL 3

Gene FADS1, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FADS1-218ENST00000544696 NISCHQ9Y2I1 1504 aa47.33■■■■■ 5.17
FADS1-218ENST00000544696 ABCC9O60706 1549 aa42.46■■■■■ 4.39
FADS1-218ENST00000544696 CCDC180Q9P1Z9 1646 aa42.38■■■■■ 4.38
FADS1-218ENST00000544696 RB1CC1Q8TDY2 1594 aa40.4■■■■■ 4.06
FADS1-218ENST00000544696 NACADO15069 1562 aa40.14■■■■■ 4.02
FADS1-218ENST00000544696 DCAF8L2P0C7V8 631 aa40.05■■■■■ 4
FADS1-218ENST00000544696 DNAJC5BQ9UF47 199 aa39.84■■■■□ 3.97
FADS1-218ENST00000544696 PABPN1Q86U42 306 aaKnown RBP eCLIP39.59■■■■□ 3.93
FADS1-218ENST00000544696 MYO15BQ96JP2 1530 aa39.59■■■■□ 3.93
FADS1-218ENST00000544696 UNC13AQ9UPW8 1703 aa39.36■■■■□ 3.89
FADS1-218ENST00000544696 ZCCHC6Q5VYS8 1495 aaKnown RBP39.21■■■■□ 3.87
FADS1-218ENST00000544696 BICRAQ9NZM4 1560 aa39.19■■■■□ 3.86
FADS1-218ENST00000544696 DCAF1Q9Y4B6 1507 aa39.09■■■■□ 3.85
FADS1-218ENST00000544696 SHROOM4Q9ULL8 1493 aa38.69■■■■□ 3.78
FADS1-218ENST00000544696 SCRIBQ14160 1630 aa38.67■■■■□ 3.78
FADS1-218ENST00000544696 CC2D2AQ9P2K1 1620 aa38.31■■■■□ 3.72
FADS1-218ENST00000544696 EIF4G1Q04637 1599 aaKnown RBP38.25■■■■□ 3.71
FADS1-218ENST00000544696 CECR2Q9BXF3 1484 aa38.25■■■■□ 3.71
FADS1-218ENST00000544696 NCAPD3P42695 1498 aa37.08■■■■□ 3.53
FADS1-218ENST00000544696 ATAD2BQ9ULI0 1458 aa36.96■■■■□ 3.51
FADS1-218ENST00000544696 SMARCA4P51532 1647 aa36.88■■■■□ 3.5
FADS1-218ENST00000544696 SMARCA2P51531 1590 aa36.84■■■■□ 3.49
FADS1-218ENST00000544696 HMGXB3Q12766 1538 aa36.76■■■■□ 3.48
FADS1-218ENST00000544696 BAZ1AQ9NRL2 1556 aaPredicted RBP36.73■■■■□ 3.47
FADS1-218ENST00000544696 ERCC6Q03468 1493 aa36.67■■■■□ 3.46
FADS1-218ENST00000544696 BAZ1BQ9UIG0 1483 aaKnown RBP36.61■■■■□ 3.45
FADS1-218ENST00000544696 DNAJC5Q9H3Z4 198 aa36.58■■■■□ 3.45
FADS1-218ENST00000544696 CUX2O14529 1486 aa36.57■■■■□ 3.45
FADS1-218ENST00000544696 PEG3Q9GZU2 1588 aa36.53■■■■□ 3.44
FADS1-218ENST00000544696 NESP48681 1621 aa36.46■■■■□ 3.43
FADS1-218ENST00000544696 MROH2BQ7Z745 1585 aa36.46■■■■□ 3.43
FADS1-218ENST00000544696 LAMC3Q9Y6N6 1575 aa36.2■■■■□ 3.39
FADS1-218ENST00000544696 PDS5BQ9NTI5 1447 aa36.05■■■■□ 3.36
FADS1-218ENST00000544696 THOC2Q8NI27 1593 aaKnown RBP36.04■■■■□ 3.36
FADS1-218ENST00000544696 WIZO95785 1651 aa35.99■■■■□ 3.35
FADS1-218ENST00000544696 CADPSQ9ULU8 1353 aa35.98■■■■□ 3.35
FADS1-218ENST00000544696 KIF21AQ7Z4S6 1674 aa35.91■■■■□ 3.34
FADS1-218ENST00000544696 RSF1Q96T23 1441 aaPredicted RBP35.74■■■■□ 3.31
FADS1-218ENST00000544696 MRC2Q9UBG0 1479 aa35.71■■■■□ 3.31
FADS1-218ENST00000544696 WDR62O43379 1518 aa35.59■■■■□ 3.29
FADS1-218ENST00000544696 CEP164Q9UPV0 1460 aa35.57■■■■□ 3.28
FADS1-218ENST00000544696 TOP2AP11388 1531 aaKnown RBP35.57■■■■□ 3.28
FADS1-218ENST00000544696 CFTRP13569 1480 aa35.54■■■■□ 3.28
FADS1-218ENST00000544696 FANCD2Q9BXW9 1451 aa35.54■■■■□ 3.28
FADS1-218ENST00000544696 URB2Q14146 1524 aaKnown RBP35.23■■■■□ 3.23
FADS1-218ENST00000544696 CCDC88BA6NC98 1476 aa35.2■■■■□ 3.23
FADS1-218ENST00000544696 PRDM2Q13029 1718 aa35.04■■■■□ 3.2
FADS1-218ENST00000544696 TRIM41Q8WV44 630 aa35.01■■■■□ 3.2
FADS1-218ENST00000544696 OSCARQ8IYS5 282 aa34.98■■■■□ 3.19
FADS1-218ENST00000544696 IFT140Q96RY7 1462 aa34.87■■■■□ 3.17
FADS1-218ENST00000544696 TOPBP1Q92547 1522 aa34.86■■■■□ 3.17
FADS1-218ENST00000544696 ABCC8Q09428 1581 aa34.81■■■■□ 3.16
FADS1-218ENST00000544696 ZNF608Q9ULD9 1512 aaPredicted RBP34.8■■■■□ 3.16
FADS1-218ENST00000544696 DNMBPQ6XZF7 1577 aa34.71■■■■□ 3.15
FADS1-218ENST00000544696 EIF4G3O43432 1585 aaKnown RBP34.56■■■■□ 3.12
FADS1-218ENST00000544696 AQRO60306 1485 aaKnown RBP eCLIP34.52■■■■□ 3.126e-9■■■■■ 30
FADS1-218ENST00000544696 TARBP1Q13395 1621 aaKnown RBP34.51■■■■□ 3.11
FADS1-218ENST00000544696 POLA1P09884 1462 aaPredicted RBP34.5■■■■□ 3.11
FADS1-218ENST00000544696 RIMBP3CA6NJZ7 1639 aa34.41■■■■□ 3.1
FADS1-218ENST00000544696 RIMBP3BA6NNM3 1639 aa34.41■■■■□ 3.1
FADS1-218ENST00000544696 RIMBP3Q9UFD9 1639 aa34.41■■■■□ 3.1
FADS1-218ENST00000544696 RAD54L2Q9Y4B4 1467 aa34.39■■■■□ 3.1
FADS1-218ENST00000544696 SOGA1O94964 1423 aa34.39■■■■□ 3.1
FADS1-218ENST00000544696 ARHGEF11O15085 1522 aa34.34■■■■□ 3.09
FADS1-218ENST00000544696 FBLN2P98095 1184 aa34.33■■■■□ 3.09
FADS1-218ENST00000544696 TDRD9Q8NDG6 1382 aaKnown RBP34.32■■■■□ 3.08
FADS1-218ENST00000544696 FGD5Q6ZNL6 1462 aa34.29■■■■□ 3.08
FADS1-218ENST00000544696 CHD1O14646 1710 aa34.26■■■■□ 3.07
FADS1-218ENST00000544696 CUX1P39880 1505 aa34.25■■■■□ 3.07
FADS1-218ENST00000544696 SUPT5HO00267 1087 aaKnown RBP34.24■■■■□ 3.07
FADS1-218ENST00000544696 WDR97A6NE52 1622 aa34.16■■■■□ 3.06
FADS1-218ENST00000544696 CYB5RLQ6IPT4 315 aa34.16■■■■□ 3.06
FADS1-218ENST00000544696 SNAPC4Q5SXM2 1469 aa34.14■■■■□ 3.06
FADS1-218ENST00000544696 CHMP7Q8WUX9 453 aaPredicted RBP34.08■■■■□ 3.05
FADS1-218ENST00000544696 GRIN2BQ13224 1484 aa34.07■■■■□ 3.04
FADS1-218ENST00000544696 MAGI1Q96QZ7 1491 aaPredicted RBP34.06■■■■□ 3.04
FADS1-218ENST00000544696 ARAP1Q96P48 1450 aa34.01■■■■□ 3.03
FADS1-218ENST00000544696 GAPVD1Q14C86 1478 aa33.95■■■■□ 3.03
FADS1-218ENST00000544696 SYNJ2O15056 1496 aa33.95■■■■□ 3.02
FADS1-218ENST00000544696 SYNJ1O43426 1573 aa33.93■■■■□ 3.02
FADS1-218ENST00000544696 CLASP1Q7Z460 1538 aa33.92■■■■□ 3.02
FADS1-218ENST00000544696 ABCA10Q8WWZ4 1543 aa33.91■■■■□ 3.02
FADS1-218ENST00000544696 PBRM1Q86U86 1689 aa33.83■■■■□ 3.01
FADS1-218ENST00000544696 WRNQ14191 1432 aaPredicted RBP eCLIP33.81■■■■□ 3
FADS1-218ENST00000544696 ABCA5Q8WWZ7 1642 aa33.81■■■■□ 3
FADS1-218ENST00000544696 TRHP20396 242 aaPredicted RBP33.79■■■■□ 3
FADS1-218ENST00000544696 TOP2BQ02880 1626 aa33.69■■■□□ 2.98
FADS1-218ENST00000544696 BIVM-ERCC5R4GMW8 1640 aa33.67■■■□□ 2.98
FADS1-218ENST00000544696 GRIN2AQ12879 1464 aa33.62■■■□□ 2.97
FADS1-218ENST00000544696 ADAMTS12P58397 1594 aa33.56■■■□□ 2.96
FADS1-218ENST00000544696 FHAD1B1AJZ9 1412 aa33.53■■■□□ 2.96
FADS1-218ENST00000544696 NUP160Q12769 1436 aa33.51■■■□□ 2.95
FADS1-218ENST00000544696 ERICH3Q5RHP9 1530 aa33.48■■■□□ 2.95
FADS1-218ENST00000544696 CEP170Q5SW79 1584 aa33.47■■■□□ 2.95
FADS1-218ENST00000544696 ERCC6L2Q5T890 1561 aa33.4■■■□□ 2.94
FADS1-218ENST00000544696 SHROOM2Q13796 1616 aa33.3■■■□□ 2.92
FADS1-218ENST00000544696 JPH4Q96JJ6 628 aa33.22■■■□□ 2.91
FADS1-218ENST00000544696 PRG4Q92954 1404 aaPredicted RBP33.2■■■□□ 2.91
FADS1-218ENST00000544696 KIF27Q86VH2 1401 aa33.11■■■□□ 2.89
FADS1-218ENST00000544696 IGF1RP08069 1367 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms