RNA–Protein interactions for RNA: ENST00000523622.1

NPM1-211, Transcript of nucleophosmin 1, humanhuman

TSL 3

Gene NPM1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-211ENST00000523622 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
NPM1-211ENST00000523622 CHIC1Q5VXU3 224 aa12.4□□□□□ -0.42
NPM1-211ENST00000523622 EHMT2Q96KQ7 1210 aa12.16□□□□□ -0.46
NPM1-211ENST00000523622 DAXXQ9UER7 740 aaPredicted RBP12.13□□□□□ -0.47
NPM1-211ENST00000523622 NCBP3Q53F19 620 aaKnown RBP11.91□□□□□ -0.5
NPM1-211ENST00000523622 PLPPR3Q6T4P5 718 aa11.88□□□□□ -0.51
NPM1-211ENST00000523622 RTN4Q9NQC3 1192 aaKnown RBP11.86□□□□□ -0.51
NPM1-211ENST00000523622 TTBK1Q5TCY1 1321 aaPredicted RBP11.82□□□□□ -0.52
NPM1-211ENST00000523622 MYT1Q01538 1121 aa11.77□□□□□ -0.53
NPM1-211ENST00000523622 AMER1Q5JTC6 1135 aaPredicted RBP11.68□□□□□ -0.54
NPM1-211ENST00000523622 PELP1Q8IZL8 1130 aaKnown RBP11.61□□□□□ -0.55
NPM1-211ENST00000523622 APLP2Q06481 763 aa11.59□□□□□ -0.55
NPM1-211ENST00000523622 ERICH6Q7L0X2 663 aa11.46□□□□□ -0.57
NPM1-211ENST00000523622 PRKCSHP14314 528 aaPredicted RBP11.45□□□□□ -0.58
NPM1-211ENST00000523622 ARXQ96QS3 562 aa11.45□□□□□ -0.58
NPM1-211ENST00000523622 KCNA4P22459 653 aa11.44□□□□□ -0.58
NPM1-211ENST00000523622 AEBP2Q6ZN18 517 aaPredicted RBP11.38□□□□□ -0.59
NPM1-211ENST00000523622 CSRNP3Q8WYN3 585 aa11.36□□□□□ -0.59
NPM1-211ENST00000523622 TIMELESSQ9UNS1 1208 aa11.22□□□□□ -0.61
NPM1-211ENST00000523622 PHF23Q9BUL5 403 aaPredicted RBP11.16□□□□□ -0.62
NPM1-211ENST00000523622 RANGAP1P46060 587 aaPredicted RBP11.14□□□□□ -0.63
NPM1-211ENST00000523622 HOMEZQ8IX15 550 aa11.07□□□□□ -0.64
NPM1-211ENST00000523622 TAOK2Q9UL54 1235 aa11.07□□□□□ -0.64
NPM1-211ENST00000523622 TULP1O00294 542 aaPredicted RBP11.04□□□□□ -0.64
NPM1-211ENST00000523622 BCANQ96GW7 911 aa10.96□□□□□ -0.65
NPM1-211ENST00000523622 TPRNQ4KMQ1 711 aa10.86□□□□□ -0.67
NPM1-211ENST00000523622 EIF5BO60841 1220 aaKnown RBP10.83□□□□□ -0.68
NPM1-211ENST00000523622 KLHL34Q8N239 644 aa10.83□□□□□ -0.68
NPM1-211ENST00000523622 PODXL2Q9NZ53 605 aa10.78□□□□□ -0.68
NPM1-211ENST00000523622 SLC4A1APQ9BWU0 796 aaKnown RBP10.76□□□□□ -0.69
NPM1-211ENST00000523622 GTF3C3Q9Y5Q9 886 aa10.76□□□□□ -0.69
NPM1-211ENST00000523622 PLCB2Q00722 1185 aa10.72□□□□□ -0.69
NPM1-211ENST00000523622 HAP1P54257 671 aaPredicted RBP10.6□□□□□ -0.71
NPM1-211ENST00000523622 NPM2Q86SE8 214 aaKnown RBP10.58□□□□□ -0.72
NPM1-211ENST00000523622 TMEM132AQ24JP5 1023 aa10.5□□□□□ -0.73
NPM1-211ENST00000523622 FBXO3Q9UK99 471 aa10.5□□□□□ -0.73
NPM1-211ENST00000523622 C14orf37Q86TY3 774 aa10.42□□□□□ -0.74
NPM1-211ENST00000523622 VSIG10Q8N0Z9 540 aa10.42□□□□□ -0.74
NPM1-211ENST00000523622 PLEKHG5O94827 1062 aa10.37□□□□□ -0.75
NPM1-211ENST00000523622 TRIM26Q12899 539 aaPredicted RBP10.3□□□□□ -0.76
NPM1-211ENST00000523622 ZBTB22O15209 634 aa10.28□□□□□ -0.76
NPM1-211ENST00000523622 DCAF8L2P0C7V8 631 aa10.22□□□□□ -0.77
NPM1-211ENST00000523622 KDM2AQ9Y2K7 1162 aa10.21□□□□□ -0.77
NPM1-211ENST00000523622 LOC105371045A0A1W2PR82 267 aa10.19□□□□□ -0.78
NPM1-211ENST00000523622 SUPT5HO00267 1087 aaKnown RBP10.19□□□□□ -0.78
NPM1-211ENST00000523622 HRCP23327 699 aa10.16□□□□□ -0.78
NPM1-211ENST00000523622 FKBP8Q14318 412 aa10.15□□□□□ -0.78
NPM1-211ENST00000523622 UBTFP17480 764 aaKnown RBP10.12□□□□□ -0.79
NPM1-211ENST00000523622 BCL11AQ9H165 835 aa10.12□□□□□ -0.79
NPM1-211ENST00000523622 ADRA2BP18089 450 aa10.08□□□□□ -0.8
NPM1-211ENST00000523622 FBLN2P98095 1184 aa10.07□□□□□ -0.8
NPM1-211ENST00000523622 PDIA4P13667 645 aaKnown RBP10.05□□□□□ -0.8
NPM1-211ENST00000523622 CHMP4AQ9BY43 222 aa9.97□□□□□ -0.81
NPM1-211ENST00000523622 CNKSR2Q8WXI2 1034 aa9.96□□□□□ -0.82
NPM1-211ENST00000523622 CDK11BP21127 795 aaKnown RBP9.95□□□□□ -0.82
NPM1-211ENST00000523622 UBE2Q2Q8WVN8 375 aa9.95□□□□□ -0.82
NPM1-211ENST00000523622 CDK11AQ9UQ88 783 aaPredicted RBP9.95□□□□□ -0.82
NPM1-211ENST00000523622 SHROOM4Q9ULL8 1493 aa9.95□□□□□ -0.82
NPM1-211ENST00000523622 NPM3O75607 178 aaKnown RBP9.92□□□□□ -0.82
NPM1-211ENST00000523622 SAMD1Q6SPF0 538 aaPredicted RBP9.9□□□□□ -0.82
NPM1-211ENST00000523622 HMGB1P09429 215 aaKnown RBP9.87□□□□□ -0.83
NPM1-211ENST00000523622 PPP6R1Q9UPN7 881 aa9.85□□□□□ -0.83
NPM1-211ENST00000523622 FAM9AQ8IZU1 332 aaPredicted RBP9.84□□□□□ -0.83
NPM1-211ENST00000523622 BRD2P25440 801 aaKnown RBP9.83□□□□□ -0.84
NPM1-211ENST00000523622 NBR1Q14596 966 aa9.83□□□□□ -0.84
NPM1-211ENST00000523622 CCDC9Q9Y3X0 531 aaKnown RBP9.83□□□□□ -0.84
NPM1-211ENST00000523622 HSP90B1P14625 803 aaKnown RBP9.82□□□□□ -0.84
NPM1-211ENST00000523622 IGSF3O75054 1194 aa9.81□□□□□ -0.84
NPM1-211ENST00000523622 PDE4CQ08493 712 aa9.8□□□□□ -0.84
NPM1-211ENST00000523622 TAF7LQ5H9L4 462 aa9.75□□□□□ -0.85
NPM1-211ENST00000523622 DHX37Q8IY37 1157 aaKnown RBP9.73□□□□□ -0.85
NPM1-211ENST00000523622 PAXIP1Q6ZW49 1069 aaPredicted RBP9.72□□□□□ -0.85
NPM1-211ENST00000523622 NEFLP07196 543 aa9.71□□□□□ -0.86
NPM1-211ENST00000523622 PUS7Q96PZ0 661 aaKnown RBP9.71□□□□□ -0.86
NPM1-211ENST00000523622 FOXD4L1Q9NU39 408 aa9.71□□□□□ -0.86
NPM1-211ENST00000523622 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.69□□□□□ -0.86
NPM1-211ENST00000523622 CFAP44Q96MT7 982 aa9.68□□□□□ -0.86
NPM1-211ENST00000523622 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
NPM1-211ENST00000523622 ZBTB7CA1YPR0 619 aa9.65□□□□□ -0.86
NPM1-211ENST00000523622 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
NPM1-211ENST00000523622 PPP4R3CPQ6ZMV5 832 aa9.63□□□□□ -0.87
NPM1-211ENST00000523622 PKNOX2Q96KN3 472 aa9.56□□□□□ -0.88
NPM1-211ENST00000523622 NECTIN2Q92692 538 aa9.55□□□□□ -0.88
NPM1-211ENST00000523622 ARID3AQ99856 593 aa9.55□□□□□ -0.88
NPM1-211ENST00000523622 DNAJC5Q9H3Z4 198 aa9.53□□□□□ -0.88
NPM1-211ENST00000523622 POLR3GLQ9BT43 218 aa9.52□□□□□ -0.89
NPM1-211ENST00000523622 NPM1P06748 294 aaKnown RBP eCLIP9.51□□□□□ -0.89
NPM1-211ENST00000523622 BCL11BQ9C0K0 894 aaPredicted RBP9.5□□□□□ -0.89
NPM1-211ENST00000523622 BCCIPQ9P287 314 aaKnown RBP eCLIP9.49□□□□□ -0.898e-6■□□□□ 10.9
NPM1-211ENST00000523622 PKD2Q13563 968 aa9.48□□□□□ -0.89
NPM1-211ENST00000523622 ZMYND15Q9H091 742 aa9.48□□□□□ -0.89
NPM1-211ENST00000523622 TRHP20396 242 aaPredicted RBP9.47□□□□□ -0.89
NPM1-211ENST00000523622 RSPH6AQ9H0K4 717 aa9.47□□□□□ -0.89
NPM1-211ENST00000523622 BRPF1P55201 1214 aaPredicted RBP9.46□□□□□ -0.9
NPM1-211ENST00000523622 SPRYD3Q8NCJ5 442 aa9.44□□□□□ -0.9
NPM1-211ENST00000523622 FGD1P98174 961 aa9.43□□□□□ -0.9
NPM1-211ENST00000523622 RSPH4AQ5TD94 716 aa9.41□□□□□ -0.9
NPM1-211ENST00000523622 C1orf115Q9H7X2 142 aa9.41□□□□□ -0.9
NPM1-211ENST00000523622 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.4□□□□□ -0.9
NPM1-211ENST00000523622 RAD21O60216 631 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms