RNA–Protein interactions for RNA: ENST00000526772.5

CTNND1-214, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-214ENST00000526772 MYT1Q01538 1121 aa11.67□□□□□ -0.54
CTNND1-214ENST00000526772 PELP1Q8IZL8 1130 aaKnown RBP11.51□□□□□ -0.57
CTNND1-214ENST00000526772 TTBK1Q5TCY1 1321 aaPredicted RBP10.85□□□□□ -0.67
CTNND1-214ENST00000526772 ERICH6Q7L0X2 663 aa10.62□□□□□ -0.71
CTNND1-214ENST00000526772 CENPBP07199 599 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-214ENST00000526772 CCER1Q8TC90 406 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-214ENST00000526772 YTHDC1Q96MU7 727 aaKnown RBP10.18□□□□□ -0.78
CTNND1-214ENST00000526772 ZEB1P37275 1124 aaPredicted RBP10.17□□□□□ -0.78
CTNND1-214ENST00000526772 NISCHQ9Y2I1 1504 aa10.17□□□□□ -0.78
CTNND1-214ENST00000526772 HRCP23327 699 aa9.99□□□□□ -0.81
CTNND1-214ENST00000526772 SUPT5HO00267 1087 aaKnown RBP9.92□□□□□ -0.82
CTNND1-214ENST00000526772 PCGF6Q9BYE7 350 aa9.92□□□□□ -0.82
CTNND1-214ENST00000526772 GLIPR1L2Q4G1C9 344 aa9.88□□□□□ -0.83
CTNND1-214ENST00000526772 RANGAP1P46060 587 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-214ENST00000526772 SLC24A1O60721 1099 aa9.84□□□□□ -0.83
CTNND1-214ENST00000526772 NEFLP07196 543 aa9.82□□□□□ -0.84
CTNND1-214ENST00000526772 MYT1LQ9UL68 1186 aa9.76□□□□□ -0.85
CTNND1-214ENST00000526772 RTL5Q5HYW3 569 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-214ENST00000526772 TRIM26Q12899 539 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-214ENST00000526772 DCAF8L2P0C7V8 631 aa9.63□□□□□ -0.87
CTNND1-214ENST00000526772 BCL11AQ9H165 835 aa9.59□□□□□ -0.87
CTNND1-214ENST00000526772 SHROOM4Q9ULL8 1493 aa9.58□□□□□ -0.88
CTNND1-214ENST00000526772 EIF5BO60841 1220 aaKnown RBP9.58□□□□□ -0.88
CTNND1-214ENST00000526772 DAXXQ9UER7 740 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-214ENST00000526772 GTF3C3Q9Y5Q9 886 aa9.54□□□□□ -0.88
CTNND1-214ENST00000526772 APLP2Q06481 763 aa9.49□□□□□ -0.89
CTNND1-214ENST00000526772 CLSPNQ9HAW4 1339 aa9.48□□□□□ -0.89
CTNND1-214ENST00000526772 ACIN1Q9UKV3 1341 aaKnown RBP9.48□□□□□ -0.89
CTNND1-214ENST00000526772 ANP32EQ9BTT0 268 aa9.43□□□□□ -0.9
CTNND1-214ENST00000526772 PPARGC1BQ86YN6 1023 aaKnown RBP9.42□□□□□ -0.9
CTNND1-214ENST00000526772 ZNF316A6NFI3 1004 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-214ENST00000526772 DIEXFQ68CQ4 756 aaKnown RBP9.37□□□□□ -0.91
CTNND1-214ENST00000526772 PRKCSHP14314 528 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-214ENST00000526772 TRIM41Q8WV44 630 aa9.31□□□□□ -0.92
CTNND1-214ENST00000526772 CDK11AQ9UQ88 783 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-214ENST00000526772 CHIC1Q5VXU3 224 aa9.31□□□□□ -0.92
CTNND1-214ENST00000526772 SCAF1Q9H7N4 1312 aaKnown RBP9.29□□□□□ -0.92
CTNND1-214ENST00000526772 DCAF1Q9Y4B6 1507 aa9.28□□□□□ -0.92
CTNND1-214ENST00000526772 NCLP19338 710 aaKnown RBP9.27□□□□□ -0.93
CTNND1-214ENST00000526772 TNNT2P45379 298 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-214ENST00000526772 FAM9AQ8IZU1 332 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-214ENST00000526772 EHMT2Q96KQ7 1210 aa9.22□□□□□ -0.93
CTNND1-214ENST00000526772 ANP32AP39687 249 aaKnown RBP9.2□□□□□ -0.94
CTNND1-214ENST00000526772 ERICH6BQ5W0A0 696 aa9.19□□□□□ -0.94
CTNND1-214ENST00000526772 ZNF326Q5BKZ1 582 aaKnown RBP9.17□□□□□ -0.94
CTNND1-214ENST00000526772 PODXL2Q9NZ53 605 aa9.15□□□□□ -0.94
CTNND1-214ENST00000526772 CDK11BP21127 795 aaKnown RBP9.14□□□□□ -0.95
CTNND1-214ENST00000526772 TRIM44Q96DX7 344 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-214ENST00000526772 POLR3GLQ9BT43 218 aa9.12□□□□□ -0.95
CTNND1-214ENST00000526772 NEUROD1Q13562 356 aa9.09□□□□□ -0.96
CTNND1-214ENST00000526772 ANP32BQ92688 251 aaKnown RBP9.08□□□□□ -0.96
CTNND1-214ENST00000526772 CCDC180Q9P1Z9 1646 aa9.08□□□□□ -0.96
CTNND1-214ENST00000526772 LOC105371045A0A1W2PR82 267 aa9.07□□□□□ -0.96
CTNND1-214ENST00000526772 BCANQ96GW7 911 aa9.06□□□□□ -0.96
CTNND1-214ENST00000526772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-214ENST00000526772 PKNOX2Q96KN3 472 aa9.05□□□□□ -0.96
CTNND1-214ENST00000526772 UBTFP17480 764 aaKnown RBP9.03□□□□□ -0.96
CTNND1-214ENST00000526772 ZBTB47Q9UFB7 747 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-214ENST00000526772 NBR1Q14596 966 aa8.99□□□□□ -0.97
CTNND1-214ENST00000526772 PTMSP20962 102 aa8.99□□□□□ -0.97
CTNND1-214ENST00000526772 DEKP35659 375 aaKnown RBP8.97□□□□□ -0.97
CTNND1-214ENST00000526772 CSRNP3Q8WYN3 585 aa8.95□□□□□ -0.98
CTNND1-214ENST00000526772 NAP1L5Q96NT1 182 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-214ENST00000526772 RSPH6AQ9H0K4 717 aa8.93□□□□□ -0.98
CTNND1-214ENST00000526772 NEFMP07197 916 aa8.93□□□□□ -0.98
CTNND1-214ENST00000526772 HSP90AA1P07900 732 aaKnown RBP8.93□□□□□ -0.98
CTNND1-214ENST00000526772 ANP32CO43423 234 aa8.92□□□□□ -0.98
CTNND1-214ENST00000526772 PPM1GO15355 546 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-214ENST00000526772 VSIG10Q8N0Z9 540 aa8.91□□□□□ -0.98
CTNND1-214ENST00000526772 CNGB1Q14028 1251 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-214ENST00000526772 RTN4Q9NQC3 1192 aaKnown RBP8.9□□□□□ -0.98
CTNND1-214ENST00000526772 FKBP8Q14318 412 aa8.89□□□□□ -0.99
CTNND1-214ENST00000526772 HNRNPUL2Q1KMD3 747 aaKnown RBP8.89□□□□□ -0.99
CTNND1-214ENST00000526772 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-214ENST00000526772 UBE2Q2Q8WVN8 375 aa8.85□□□□□ -0.99
CTNND1-214ENST00000526772 HSP90AA2PQ14568 343 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-214ENST00000526772 DDRGK1Q96HY6 314 aa8.84□□□□□ -0.99
CTNND1-214ENST00000526772 A0A0U1RQG5 324 aaPredicted RBP8.82□□□□□ -1
CTNND1-214ENST00000526772 PDE4CQ08493 712 aa8.82□□□□□ -1
CTNND1-214ENST00000526772 NPM2Q86SE8 214 aaKnown RBP8.81□□□□□ -1
CTNND1-214ENST00000526772 NOP58Q9Y2X3 529 aaKnown RBP8.81□□□□□ -1
CTNND1-214ENST00000526772 CCDC136Q96JN2 1154 aa8.78□□□□□ -1
CTNND1-214ENST00000526772 L1TD1Q5T7N2 865 aaKnown RBP8.77□□□□□ -1.01
CTNND1-214ENST00000526772 APPP05067 770 aa8.75□□□□□ -1.01
CTNND1-214ENST00000526772 TNNT3P45378 269 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-214ENST00000526772 MIER1Q8N108 512 aa8.75□□□□□ -1.01
CTNND1-214ENST00000526772 PNNQ9H307 717 aaKnown RBP8.75□□□□□ -1.01
CTNND1-214ENST00000526772 SUPT16HQ9Y5B9 1047 aaKnown RBP8.74□□□□□ -1.01
CTNND1-214ENST00000526772 HOMEZQ8IX15 550 aa8.74□□□□□ -1.01
CTNND1-214ENST00000526772 ANO8Q9HCE9 1232 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-214ENST00000526772 UPF2Q9HAU5 1272 aaKnown RBP8.72□□□□□ -1.01
CTNND1-214ENST00000526772 MYO15BQ96JP2 1530 aa8.71□□□□□ -1.01
CTNND1-214ENST00000526772 CANXP27824 592 aaKnown RBP8.71□□□□□ -1.02
CTNND1-214ENST00000526772 LAS1LQ9Y4W2 734 aaKnown RBP8.71□□□□□ -1.02
CTNND1-214ENST00000526772 CALRP27797 417 aaKnown RBP8.71□□□□□ -1.02
CTNND1-214ENST00000526772 AMER1Q5JTC6 1135 aaPredicted RBP8.7□□□□□ -1.02
CTNND1-214ENST00000526772 RBM19Q9Y4C8 960 aaKnown RBP8.69□□□□□ -1.02
CTNND1-214ENST00000526772 HMGB1P09429 215 aaKnown RBP8.68□□□□□ -1.02
CTNND1-214ENST00000526772 DNTTIP2Q5QJE6 756 aaKnown RBP8.67□□□□□ -1.02
CTNND1-214ENST00000526772 ATP1B4Q9UN42 357 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms