RNA–Protein interactions for RNA: ENST00000473263.1

FADS1-208, Transcript of fatty acid desaturase 1, humanhuman

TSL 4

Gene FADS1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FADS1-208ENST00000473263 NISCHQ9Y2I1 1504 aa51.36■■■■■ 5.81
FADS1-208ENST00000473263 CCDC180Q9P1Z9 1646 aa45.7■■■■■ 4.91
FADS1-208ENST00000473263 ABCC9O60706 1549 aa45.1■■■■■ 4.81
FADS1-208ENST00000473263 RB1CC1Q8TDY2 1594 aa43.2■■■■■ 4.51
FADS1-208ENST00000473263 NACADO15069 1562 aa43.1■■■■■ 4.49
FADS1-208ENST00000473263 DCAF8L2P0C7V8 631 aa43.08■■■■■ 4.49
FADS1-208ENST00000473263 MYO15BQ96JP2 1530 aa42.77■■■■■ 4.44
FADS1-208ENST00000473263 ZCCHC6Q5VYS8 1495 aaKnown RBP42.69■■■■■ 4.42
FADS1-208ENST00000473263 DCAF1Q9Y4B6 1507 aa42.48■■■■■ 4.39
FADS1-208ENST00000473263 UNC13AQ9UPW8 1703 aa42.2■■■■■ 4.35
FADS1-208ENST00000473263 PABPN1Q86U42 306 aaKnown RBP eCLIP42.16■■■■■ 4.34
FADS1-208ENST00000473263 BICRAQ9NZM4 1560 aa41.96■■■■■ 4.31
FADS1-208ENST00000473263 DNAJC5BQ9UF47 199 aa41.8■■■■■ 4.28
FADS1-208ENST00000473263 SCRIBQ14160 1630 aa41.7■■■■■ 4.27
FADS1-208ENST00000473263 SHROOM4Q9ULL8 1493 aa41.44■■■■■ 4.22
FADS1-208ENST00000473263 EIF4G1Q04637 1599 aaKnown RBP40.85■■■■■ 4.13
FADS1-208ENST00000473263 CC2D2AQ9P2K1 1620 aa40.76■■■■■ 4.12
FADS1-208ENST00000473263 CECR2Q9BXF3 1484 aa40.56■■■■■ 4.08
FADS1-208ENST00000473263 SMARCA4P51532 1647 aa39.87■■■■□ 3.97
FADS1-208ENST00000473263 NCAPD3P42695 1498 aa39.84■■■■□ 3.97
FADS1-208ENST00000473263 ATAD2BQ9ULI0 1458 aa39.8■■■■□ 3.96
FADS1-208ENST00000473263 BAZ1AQ9NRL2 1556 aaPredicted RBP39.79■■■■□ 3.96
FADS1-208ENST00000473263 SMARCA2P51531 1590 aa39.67■■■■□ 3.94
FADS1-208ENST00000473263 MROH2BQ7Z745 1585 aa39.59■■■■□ 3.93
FADS1-208ENST00000473263 HMGXB3Q12766 1538 aa39.54■■■■□ 3.92
FADS1-208ENST00000473263 PEG3Q9GZU2 1588 aa39.51■■■■□ 3.92
FADS1-208ENST00000473263 BAZ1BQ9UIG0 1483 aaKnown RBP39.41■■■■□ 3.9
FADS1-208ENST00000473263 WIZO95785 1651 aa39.1■■■■□ 3.85
FADS1-208ENST00000473263 RSF1Q96T23 1441 aaPredicted RBP39.06■■■■□ 3.84
FADS1-208ENST00000473263 NESP48681 1621 aa38.95■■■■□ 3.83
FADS1-208ENST00000473263 ERCC6Q03468 1493 aa38.86■■■■□ 3.81
FADS1-208ENST00000473263 LAMC3Q9Y6N6 1575 aa38.76■■■■□ 3.8
FADS1-208ENST00000473263 CADPSQ9ULU8 1353 aa38.67■■■■□ 3.78
FADS1-208ENST00000473263 TOP2AP11388 1531 aaKnown RBP38.66■■■■□ 3.78
FADS1-208ENST00000473263 CUX2O14529 1486 aa38.58■■■■□ 3.77
FADS1-208ENST00000473263 PDS5BQ9NTI5 1447 aa38.55■■■■□ 3.76
FADS1-208ENST00000473263 KIF21AQ7Z4S6 1674 aa38.4■■■■□ 3.74
FADS1-208ENST00000473263 THOC2Q8NI27 1593 aaKnown RBP38.36■■■■□ 3.73
FADS1-208ENST00000473263 CFTRP13569 1480 aa38.35■■■■□ 3.73
FADS1-208ENST00000473263 CCDC88BA6NC98 1476 aa38.28■■■■□ 3.72
FADS1-208ENST00000473263 FANCD2Q9BXW9 1451 aa38.17■■■■□ 3.7
FADS1-208ENST00000473263 MRC2Q9UBG0 1479 aa38.15■■■■□ 3.7
FADS1-208ENST00000473263 CEP164Q9UPV0 1460 aa38.13■■■■□ 3.69
FADS1-208ENST00000473263 WDR62O43379 1518 aa38.03■■■■□ 3.68
FADS1-208ENST00000473263 DNAJC5Q9H3Z4 198 aa37.95■■■■□ 3.67
FADS1-208ENST00000473263 PRDM2Q13029 1718 aa37.9■■■■□ 3.66
FADS1-208ENST00000473263 SUPT5HO00267 1087 aaKnown RBP37.84■■■■□ 3.65
FADS1-208ENST00000473263 URB2Q14146 1524 aaKnown RBP37.82■■■■□ 3.65
FADS1-208ENST00000473263 TOPBP1Q92547 1522 aa37.53■■■■□ 3.6
FADS1-208ENST00000473263 ABCC8Q09428 1581 aa37.51■■■■□ 3.59
FADS1-208ENST00000473263 DNMBPQ6XZF7 1577 aa37.43■■■■□ 3.58
FADS1-208ENST00000473263 IFT140Q96RY7 1462 aa37.37■■■■□ 3.57
FADS1-208ENST00000473263 ZNF608Q9ULD9 1512 aaPredicted RBP37.25■■■■□ 3.55
FADS1-208ENST00000473263 POLA1P09884 1462 aaPredicted RBP37.2■■■■□ 3.54
FADS1-208ENST00000473263 CUX1P39880 1505 aa37.14■■■■□ 3.54
FADS1-208ENST00000473263 TARBP1Q13395 1621 aaKnown RBP37.14■■■■□ 3.54
FADS1-208ENST00000473263 SOGA1O94964 1423 aa37.07■■■■□ 3.52
FADS1-208ENST00000473263 RAD54L2Q9Y4B4 1467 aa37.07■■■■□ 3.52
FADS1-208ENST00000473263 FGD5Q6ZNL6 1462 aa37.05■■■■□ 3.52
FADS1-208ENST00000473263 AQRO60306 1485 aaKnown RBP eCLIP37.02■■■■□ 3.526e-9■■■□□ 16
FADS1-208ENST00000473263 EIF4G3O43432 1585 aaKnown RBP37.01■■■■□ 3.52
FADS1-208ENST00000473263 OSCARQ8IYS5 282 aa37.01■■■■□ 3.52
FADS1-208ENST00000473263 TDRD9Q8NDG6 1382 aaKnown RBP36.91■■■■□ 3.5
FADS1-208ENST00000473263 WRNQ14191 1432 aaPredicted RBP eCLIP36.79■■■■□ 3.48
FADS1-208ENST00000473263 WDR97A6NE52 1622 aa36.78■■■■□ 3.48
FADS1-208ENST00000473263 TOP2BQ02880 1626 aa36.71■■■■□ 3.47
FADS1-208ENST00000473263 ABCA10Q8WWZ4 1543 aa36.69■■■■□ 3.46
FADS1-208ENST00000473263 BIVM-ERCC5R4GMW8 1640 aa36.69■■■■□ 3.46
FADS1-208ENST00000473263 SYNJ1O43426 1573 aa36.69■■■■□ 3.46
FADS1-208ENST00000473263 GRIN2BQ13224 1484 aa36.64■■■■□ 3.46
FADS1-208ENST00000473263 FBLN2P98095 1184 aa36.63■■■■□ 3.45
FADS1-208ENST00000473263 SNAPC4Q5SXM2 1469 aa36.62■■■■□ 3.45
FADS1-208ENST00000473263 GAPVD1Q14C86 1478 aa36.61■■■■□ 3.45
FADS1-208ENST00000473263 CHD1O14646 1710 aa36.59■■■■□ 3.45
FADS1-208ENST00000473263 MAGI1Q96QZ7 1491 aaPredicted RBP36.56■■■■□ 3.44
FADS1-208ENST00000473263 ABCA5Q8WWZ7 1642 aa36.52■■■■□ 3.44
FADS1-208ENST00000473263 CHMP7Q8WUX9 453 aaPredicted RBP36.5■■■■□ 3.43
FADS1-208ENST00000473263 PBRM1Q86U86 1689 aa36.46■■■■□ 3.43
FADS1-208ENST00000473263 SYNJ2O15056 1496 aa36.43■■■■□ 3.42
FADS1-208ENST00000473263 TRIM41Q8WV44 630 aa36.42■■■■□ 3.42
FADS1-208ENST00000473263 RIMBP3CA6NJZ7 1639 aa36.35■■■■□ 3.41
FADS1-208ENST00000473263 RIMBP3BA6NNM3 1639 aa36.35■■■■□ 3.41
FADS1-208ENST00000473263 RIMBP3Q9UFD9 1639 aa36.35■■■■□ 3.41
FADS1-208ENST00000473263 ARHGEF11O15085 1522 aa36.33■■■■□ 3.41
FADS1-208ENST00000473263 CLASP1Q7Z460 1538 aa36.24■■■■□ 3.39
FADS1-208ENST00000473263 ERICH3Q5RHP9 1530 aa36.23■■■■□ 3.39
FADS1-208ENST00000473263 ADAMTS12P58397 1594 aa36.19■■■■□ 3.38
FADS1-208ENST00000473263 FHAD1B1AJZ9 1412 aa36.18■■■■□ 3.38
FADS1-208ENST00000473263 GRIN2AQ12879 1464 aa36.16■■■■□ 3.38
FADS1-208ENST00000473263 CYB5RLQ6IPT4 315 aa36.09■■■■□ 3.37
FADS1-208ENST00000473263 KIF27Q86VH2 1401 aa36.05■■■■□ 3.36
FADS1-208ENST00000473263 NUP160Q12769 1436 aa36.04■■■■□ 3.36
FADS1-208ENST00000473263 ARAP1Q96P48 1450 aa36.04■■■■□ 3.36
FADS1-208ENST00000473263 IGF1RP08069 1367 aa36.02■■■■□ 3.36
FADS1-208ENST00000473263 CEP170Q5SW79 1584 aa35.98■■■■□ 3.35
FADS1-208ENST00000473263 CUL7Q14999 1698 aa35.78■■■■□ 3.32
FADS1-208ENST00000473263 CARMIL1Q5VZK9 1371 aa35.76■■■■□ 3.31
FADS1-208ENST00000473263 SHROOM2Q13796 1616 aa35.75■■■■□ 3.31
FADS1-208ENST00000473263 ERCC6L2Q5T890 1561 aa35.74■■■■□ 3.31
FADS1-208ENST00000473263 JPH4Q96JJ6 628 aa35.73■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms