RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 NISCHQ9Y2I1 1504 aa24.85■■□□□ 1.57
CLPB-201ENST00000294053 CCDC180Q9P1Z9 1646 aa21.39■■□□□ 1.02
CLPB-201ENST00000294053 SHROOM4Q9ULL8 1493 aa21.33■■□□□ 1.01
CLPB-201ENST00000294053 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
CLPB-201ENST00000294053 DCAF8L2P0C7V8 631 aa20.92■□□□□ 0.94
CLPB-201ENST00000294053 SUPT5HO00267 1087 aaKnown RBP20.8■□□□□ 0.92
CLPB-201ENST00000294053 DCAF1Q9Y4B6 1507 aa20.33■□□□□ 0.85
CLPB-201ENST00000294053 ABCC9O60706 1549 aa20.24■□□□□ 0.83
CLPB-201ENST00000294053 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
CLPB-201ENST00000294053 HRCP23327 699 aa20.04■□□□□ 0.8
CLPB-201ENST00000294053 CHIC1Q5VXU3 224 aa20.02■□□□□ 0.8
CLPB-201ENST00000294053 PPARGC1BQ86YN6 1023 aaKnown RBP20.02■□□□□ 0.79
CLPB-201ENST00000294053 PCGF6Q9BYE7 350 aa20■□□□□ 0.79
CLPB-201ENST00000294053 SCRIBQ14160 1630 aa19.96■□□□□ 0.79
CLPB-201ENST00000294053 NACADO15069 1562 aa19.91■□□□□ 0.78
CLPB-201ENST00000294053 RB1CC1Q8TDY2 1594 aa19.71■□□□□ 0.75
CLPB-201ENST00000294053 RSF1Q96T23 1441 aaPredicted RBP19.65■□□□□ 0.74
CLPB-201ENST00000294053 LOC105371045A0A1W2PR82 267 aa19.55■□□□□ 0.72
CLPB-201ENST00000294053 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
CLPB-201ENST00000294053 UNC13AQ9UPW8 1703 aa19.44■□□□□ 0.7
CLPB-201ENST00000294053 MROH2BQ7Z745 1585 aa19.39■□□□□ 0.7
CLPB-201ENST00000294053 PELP1Q8IZL8 1130 aaKnown RBP19.31■□□□□ 0.68
CLPB-201ENST00000294053 WIZO95785 1651 aa19.3■□□□□ 0.68
CLPB-201ENST00000294053 FAM9AQ8IZU1 332 aaPredicted RBP19.27■□□□□ 0.68
CLPB-201ENST00000294053 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
CLPB-201ENST00000294053 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
CLPB-201ENST00000294053 EHMT2Q96KQ7 1210 aa19.24■□□□□ 0.67
CLPB-201ENST00000294053 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
CLPB-201ENST00000294053 SCAF1Q9H7N4 1312 aaKnown RBP19.12■□□□□ 0.65
CLPB-201ENST00000294053 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
CLPB-201ENST00000294053 TRIM26Q12899 539 aaPredicted RBP18.99■□□□□ 0.63
CLPB-201ENST00000294053 SMARCA4P51532 1647 aa18.97■□□□□ 0.63
CLPB-201ENST00000294053 CCDC88BA6NC98 1476 aa18.87■□□□□ 0.61
CLPB-201ENST00000294053 TOP2AP11388 1531 aaKnown RBP18.87■□□□□ 0.61
CLPB-201ENST00000294053 EIF4G1Q04637 1599 aaKnown RBP18.86■□□□□ 0.61
CLPB-201ENST00000294053 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
CLPB-201ENST00000294053 SMARCA2P51531 1590 aa18.81■□□□□ 0.6
CLPB-201ENST00000294053 ZEB1P37275 1124 aaPredicted RBP18.76■□□□□ 0.59
CLPB-201ENST00000294053 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
CLPB-201ENST00000294053 NEUROD1Q13562 356 aa18.65■□□□□ 0.58
CLPB-201ENST00000294053 GTF3C3Q9Y5Q9 886 aa18.64■□□□□ 0.57
CLPB-201ENST00000294053 SOGA1O94964 1423 aa18.63■□□□□ 0.57
CLPB-201ENST00000294053 ATAD2BQ9ULI0 1458 aa18.6■□□□□ 0.57
CLPB-201ENST00000294053 ACIN1Q9UKV3 1341 aaKnown RBP18.58■□□□□ 0.57
CLPB-201ENST00000294053 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.57
CLPB-201ENST00000294053 TTBK1Q5TCY1 1321 aaPredicted RBP18.54■□□□□ 0.56
CLPB-201ENST00000294053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.51■□□□□ 0.55
CLPB-201ENST00000294053 MYT1Q01538 1121 aa18.49■□□□□ 0.55
CLPB-201ENST00000294053 BAZ1BQ9UIG0 1483 aaKnown RBP18.48■□□□□ 0.55
CLPB-201ENST00000294053 CCER1Q8TC90 406 aaPredicted RBP18.48■□□□□ 0.55
CLPB-201ENST00000294053 YTHDC1Q96MU7 727 aaKnown RBP18.48■□□□□ 0.55
CLPB-201ENST00000294053 CENPBP07199 599 aaPredicted RBP18.46■□□□□ 0.55
CLPB-201ENST00000294053 WRNQ14191 1432 aaPredicted RBP eCLIP18.45■□□□□ 0.54
CLPB-201ENST00000294053 CSRNP3Q8WYN3 585 aa18.42■□□□□ 0.54
CLPB-201ENST00000294053 NCAPD3P42695 1498 aa18.42■□□□□ 0.54
CLPB-201ENST00000294053 UBTFP17480 764 aaKnown RBP18.41■□□□□ 0.54
CLPB-201ENST00000294053 SYNJ1O43426 1573 aa18.41■□□□□ 0.54
CLPB-201ENST00000294053 CEP162Q5TB80 1403 aa18.39■□□□□ 0.53
CLPB-201ENST00000294053 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
CLPB-201ENST00000294053 HMGXB3Q12766 1538 aa18.37■□□□□ 0.53
CLPB-201ENST00000294053 CC2D2AQ9P2K1 1620 aa18.32■□□□□ 0.52
CLPB-201ENST00000294053 TNIKQ9UKE5 1360 aa18.29■□□□□ 0.52
CLPB-201ENST00000294053 RANGAP1P46060 587 aaPredicted RBP18.28■□□□□ 0.52
CLPB-201ENST00000294053 EEA1Q15075 1411 aa18.25■□□□□ 0.51
CLPB-201ENST00000294053 GOLGA3Q08378 1498 aa18.23■□□□□ 0.51
CLPB-201ENST00000294053 RAPGEF2Q9Y4G8 1499 aa18.15■□□□□ 0.5
CLPB-201ENST00000294053 CEP164Q9UPV0 1460 aa18.13■□□□□ 0.49
CLPB-201ENST00000294053 TOP2BQ02880 1626 aa18.11■□□□□ 0.49
CLPB-201ENST00000294053 KIF21BO75037 1637 aa18.08■□□□□ 0.48
CLPB-201ENST00000294053 CLIP1P30622 1438 aa18.07■□□□□ 0.48
CLPB-201ENST00000294053 CUX1P39880 1505 aa18.05■□□□□ 0.48
CLPB-201ENST00000294053 CFTRP13569 1480 aa18.04■□□□□ 0.48
CLPB-201ENST00000294053 BIVM-ERCC5R4GMW8 1640 aa18.02■□□□□ 0.47
CLPB-201ENST00000294053 DNAJC5BQ9UF47 199 aa17.99■□□□□ 0.47
CLPB-201ENST00000294053 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
CLPB-201ENST00000294053 CADPSQ9ULU8 1353 aa17.94■□□□□ 0.46
CLPB-201ENST00000294053 VPS8Q8N3P4 1428 aa17.93■□□□□ 0.46
CLPB-201ENST00000294053 PRDM2Q13029 1718 aa17.91■□□□□ 0.46
CLPB-201ENST00000294053 MIER1Q8N108 512 aa17.9■□□□□ 0.46
CLPB-201ENST00000294053 PRXQ9BXM0 1461 aa17.9■□□□□ 0.46
CLPB-201ENST00000294053 ZNF316A6NFI3 1004 aaPredicted RBP17.88■□□□□ 0.45
CLPB-201ENST00000294053 APLP2Q06481 763 aa17.86■□□□□ 0.45
CLPB-201ENST00000294053 KIF27Q86VH2 1401 aa17.85■□□□□ 0.45
CLPB-201ENST00000294053 NESP48681 1621 aa17.84■□□□□ 0.45
CLPB-201ENST00000294053 ARAP1Q96P48 1450 aa17.81■□□□□ 0.44
CLPB-201ENST00000294053 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
CLPB-201ENST00000294053 KANK4Q5T7N3 995 aaPredicted RBP17.8■□□□□ 0.44
CLPB-201ENST00000294053 CUX2O14529 1486 aa17.79■□□□□ 0.44
CLPB-201ENST00000294053 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
CLPB-201ENST00000294053 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
CLPB-201ENST00000294053 FANCD2Q9BXW9 1451 aa17.74■□□□□ 0.43
CLPB-201ENST00000294053 IGF1RP08069 1367 aa17.73■□□□□ 0.43
CLPB-201ENST00000294053 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
CLPB-201ENST00000294053 RAD54L2Q9Y4B4 1467 aa17.67■□□□□ 0.42
CLPB-201ENST00000294053 P3H3Q8IVL6 736 aa17.64■□□□□ 0.42
CLPB-201ENST00000294053 CARMIL1Q5VZK9 1371 aa17.64■□□□□ 0.42
CLPB-201ENST00000294053 BCL11AQ9H165 835 aa17.64■□□□□ 0.41
CLPB-201ENST00000294053 BCANQ96GW7 911 aa17.64■□□□□ 0.41
CLPB-201ENST00000294053 ITGAEP38570 1179 aa17.6■□□□□ 0.41
CLPB-201ENST00000294053 KIF21AQ7Z4S6 1674 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms