RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 DCAF8L2P0C7V8 631 aa14.26□□□□□ -0.13
CTNND1-202ENST00000361332 PELP1Q8IZL8 1130 aaKnown RBP13.46□□□□□ -0.25
CTNND1-202ENST00000361332 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.29
CTNND1-202ENST00000361332 FAM9AQ8IZU1 332 aaPredicted RBP13.19□□□□□ -0.3
CTNND1-202ENST00000361332 NISCHQ9Y2I1 1504 aa13.15□□□□□ -0.3
CTNND1-202ENST00000361332 ERICH6Q7L0X2 663 aa13.09□□□□□ -0.31
CTNND1-202ENST00000361332 MYT1Q01538 1121 aa13.06□□□□□ -0.32
CTNND1-202ENST00000361332 APLP2Q06481 763 aa13.05□□□□□ -0.32
CTNND1-202ENST00000361332 SUPT5HO00267 1087 aaKnown RBP12.98□□□□□ -0.33
CTNND1-202ENST00000361332 CCER1Q8TC90 406 aaPredicted RBP12.87□□□□□ -0.35
CTNND1-202ENST00000361332 CENPBP07199 599 aaPredicted RBP12.81□□□□□ -0.36
CTNND1-202ENST00000361332 TTBK1Q5TCY1 1321 aaPredicted RBP12.79□□□□□ -0.36
CTNND1-202ENST00000361332 ATP1B4Q9UN42 357 aaPredicted RBP12.75□□□□□ -0.37
CTNND1-202ENST00000361332 SHROOM4Q9ULL8 1493 aa12.74□□□□□ -0.37
CTNND1-202ENST00000361332 RANGAP1P46060 587 aaPredicted RBP12.7□□□□□ -0.38
CTNND1-202ENST00000361332 PCGF6Q9BYE7 350 aa12.65□□□□□ -0.38
CTNND1-202ENST00000361332 MYT1LQ9UL68 1186 aa12.63□□□□□ -0.39
CTNND1-202ENST00000361332 CHIC1Q5VXU3 224 aa12.5□□□□□ -0.41
CTNND1-202ENST00000361332 ZEB1P37275 1124 aaPredicted RBP12.5□□□□□ -0.41
CTNND1-202ENST00000361332 DAXXQ9UER7 740 aaPredicted RBP12.5□□□□□ -0.41
CTNND1-202ENST00000361332 NEFLP07196 543 aa12.48□□□□□ -0.41
CTNND1-202ENST00000361332 YTHDC1Q96MU7 727 aaKnown RBP12.44□□□□□ -0.42
CTNND1-202ENST00000361332 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
CTNND1-202ENST00000361332 POLR3GLQ9BT43 218 aa12.37□□□□□ -0.43
CTNND1-202ENST00000361332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.25□□□□□ -0.45
CTNND1-202ENST00000361332 CNGB1Q14028 1251 aaPredicted RBP12.25□□□□□ -0.45
CTNND1-202ENST00000361332 HNRNPUL2Q1KMD3 747 aaKnown RBP12.25□□□□□ -0.45
CTNND1-202ENST00000361332 CLSPNQ9HAW4 1339 aa12.15□□□□□ -0.46
CTNND1-202ENST00000361332 SLC24A1O60721 1099 aa12.13□□□□□ -0.47
CTNND1-202ENST00000361332 ZNF316A6NFI3 1004 aaPredicted RBP12.12□□□□□ -0.47
CTNND1-202ENST00000361332 UBTFP17480 764 aaKnown RBP12.11□□□□□ -0.47
CTNND1-202ENST00000361332 RTL5Q5HYW3 569 aaPredicted RBP12.08□□□□□ -0.48
CTNND1-202ENST00000361332 HRCP23327 699 aa12.04□□□□□ -0.48
CTNND1-202ENST00000361332 BCL11AQ9H165 835 aa12.03□□□□□ -0.48
CTNND1-202ENST00000361332 ZBTB47Q9UFB7 747 aaPredicted RBP11.99□□□□□ -0.49
CTNND1-202ENST00000361332 ITGAEP38570 1179 aa11.98□□□□□ -0.49
CTNND1-202ENST00000361332 TRIM41Q8WV44 630 aa11.97□□□□□ -0.49
CTNND1-202ENST00000361332 BCANQ96GW7 911 aa11.93□□□□□ -0.5
CTNND1-202ENST00000361332 TRIM26Q12899 539 aaPredicted RBP11.91□□□□□ -0.5
CTNND1-202ENST00000361332 PPARGC1BQ86YN6 1023 aaKnown RBP11.87□□□□□ -0.51
CTNND1-202ENST00000361332 GTF3C3Q9Y5Q9 886 aa11.79□□□□□ -0.52
CTNND1-202ENST00000361332 PLPPR3Q6T4P5 718 aa11.76□□□□□ -0.53
CTNND1-202ENST00000361332 DIEXFQ68CQ4 756 aaKnown RBP11.76□□□□□ -0.53
CTNND1-202ENST00000361332 LOC105371045A0A1W2PR82 267 aa11.75□□□□□ -0.53
CTNND1-202ENST00000361332 EIF5BO60841 1220 aaKnown RBP11.75□□□□□ -0.53
CTNND1-202ENST00000361332 NEFMP07197 916 aa11.71□□□□□ -0.53
CTNND1-202ENST00000361332 CANXP27824 592 aaKnown RBP11.71□□□□□ -0.53
CTNND1-202ENST00000361332 CDK11BP21127 795 aaKnown RBP11.69□□□□□ -0.54
CTNND1-202ENST00000361332 CDK11AQ9UQ88 783 aaPredicted RBP11.69□□□□□ -0.54
CTNND1-202ENST00000361332 A0A0G2JS52 829 aa11.69□□□□□ -0.54
CTNND1-202ENST00000361332 GLIPR1L2Q4G1C9 344 aa11.64□□□□□ -0.55
CTNND1-202ENST00000361332 ZNF326Q5BKZ1 582 aaKnown RBP11.62□□□□□ -0.55
CTNND1-202ENST00000361332 TRIM52Q96A61 297 aa11.62□□□□□ -0.55
CTNND1-202ENST00000361332 ESF1Q9H501 851 aaKnown RBP11.6□□□□□ -0.55
CTNND1-202ENST00000361332 SCAF1Q9H7N4 1312 aaKnown RBP11.59□□□□□ -0.55
CTNND1-202ENST00000361332 TULP1O00294 542 aaPredicted RBP11.55□□□□□ -0.56
CTNND1-202ENST00000361332 NCBP3Q53F19 620 aaKnown RBP11.53□□□□□ -0.56
CTNND1-202ENST00000361332 ACIN1Q9UKV3 1341 aaKnown RBP11.52□□□□□ -0.57
CTNND1-202ENST00000361332 FBLN2P98095 1184 aa11.51□□□□□ -0.57
CTNND1-202ENST00000361332 ANP32AP39687 249 aaKnown RBP11.5□□□□□ -0.57
CTNND1-202ENST00000361332 FAM50AQ14320 339 aaKnown RBP11.5□□□□□ -0.57
CTNND1-202ENST00000361332 ANP32BQ92688 251 aaKnown RBP11.49□□□□□ -0.57
CTNND1-202ENST00000361332 STAG3Q9UJ98 1225 aa11.48□□□□□ -0.57
CTNND1-202ENST00000361332 HSP90AA1P07900 732 aaKnown RBP11.47□□□□□ -0.57
CTNND1-202ENST00000361332 NPM2Q86SE8 214 aaKnown RBP11.46□□□□□ -0.58
CTNND1-202ENST00000361332 PLEKHG5O94827 1062 aa11.43□□□□□ -0.58
CTNND1-202ENST00000361332 NEUROD1Q13562 356 aa11.43□□□□□ -0.58
CTNND1-202ENST00000361332 ANP32CO43423 234 aa11.4□□□□□ -0.58
CTNND1-202ENST00000361332 ZBTB7CA1YPR0 619 aa11.39□□□□□ -0.59
CTNND1-202ENST00000361332 CHGAP10645 457 aaKnown RBP11.38□□□□□ -0.59
CTNND1-202ENST00000361332 NBR1Q14596 966 aa11.34□□□□□ -0.59
CTNND1-202ENST00000361332 ARXQ96QS3 562 aa11.31□□□□□ -0.6
CTNND1-202ENST00000361332 HAP1P54257 671 aaPredicted RBP11.31□□□□□ -0.6
CTNND1-202ENST00000361332 FKBP8Q14318 412 aa11.29□□□□□ -0.6
CTNND1-202ENST00000361332 ARID3CA6NKF2 412 aa11.29□□□□□ -0.6
CTNND1-202ENST00000361332 C14orf37Q86TY3 774 aa11.27□□□□□ -0.6
CTNND1-202ENST00000361332 NPHP1O15259 732 aa11.27□□□□□ -0.61
CTNND1-202ENST00000361332 CLSTN1O94985 981 aa11.24□□□□□ -0.61
CTNND1-202ENST00000361332 UPF2Q9HAU5 1272 aaKnown RBP11.24□□□□□ -0.61
CTNND1-202ENST00000361332 ZNF777Q9ULD5 760 aaPredicted RBP11.24□□□□□ -0.61
CTNND1-202ENST00000361332 PRM3Q9NNZ6 103 aa11.23□□□□□ -0.61
CTNND1-202ENST00000361332 NPM1P06748 294 aaKnown RBP eCLIP11.2□□□□□ -0.62
CTNND1-202ENST00000361332 SENP3Q9H4L4 574 aaPredicted RBP11.18□□□□□ -0.62
CTNND1-202ENST00000361332 TAOK2Q9UL54 1235 aa11.18□□□□□ -0.62
CTNND1-202ENST00000361332 KRI1Q8N9T8 703 aaKnown RBP11.17□□□□□ -0.62
CTNND1-202ENST00000361332 TNNT2P45379 298 aaPredicted RBP11.16□□□□□ -0.62
CTNND1-202ENST00000361332 DCAF1Q9Y4B6 1507 aa11.16□□□□□ -0.62
CTNND1-202ENST00000361332 ANP32EQ9BTT0 268 aa11.14□□□□□ -0.63
CTNND1-202ENST00000361332 ZRSR1Q15695 479 aaKnown RBP11.13□□□□□ -0.63
CTNND1-202ENST00000361332 TPRNQ4KMQ1 711 aa11.11□□□□□ -0.63
CTNND1-202ENST00000361332 MYH16Q9H6N6 1097 aa11.11□□□□□ -0.63
CTNND1-202ENST00000361332 SALL2Q9Y467 1007 aaPredicted RBP11.1□□□□□ -0.63
CTNND1-202ENST00000361332 NCLP19338 710 aaKnown RBP11.08□□□□□ -0.64
CTNND1-202ENST00000361332 CCDC136Q96JN2 1154 aa11.08□□□□□ -0.64
CTNND1-202ENST00000361332 TRIM44Q96DX7 344 aaPredicted RBP11.08□□□□□ -0.64
CTNND1-202ENST00000361332 HNRNPUQ00839 825 aaKnown RBP eCLIP11.07□□□□□ -0.64
CTNND1-202ENST00000361332 ISY1Q9ULR0 285 aaKnown RBP11.07□□□□□ -0.64
CTNND1-202ENST00000361332 RTN4Q9NQC3 1192 aaKnown RBP11.06□□□□□ -0.64
CTNND1-202ENST00000361332 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.05□□□□□ -0.64
CTNND1-202ENST00000361332 PPP1R15AO75807 674 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms