RNA–Protein interactions for RNA: ENST00000489769.1

SERPINA1-210, Transcript of serpin family A member 1, humanhuman

TSL 1 (best)

Gene SERPINA1, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-210ENST00000489769 NISCHQ9Y2I1 1504 aa27.23■■□□□ 1.95
SERPINA1-210ENST00000489769 CCDC180Q9P1Z9 1646 aa24.09■■□□□ 1.45
SERPINA1-210ENST00000489769 ABCC9O60706 1549 aa23.44■■□□□ 1.34
SERPINA1-210ENST00000489769 DCAF8L2P0C7V8 631 aa22.81■■□□□ 1.24
SERPINA1-210ENST00000489769 ZCCHC6Q5VYS8 1495 aaKnown RBP22.7■■□□□ 1.22
SERPINA1-210ENST00000489769 NACADO15069 1562 aa22.58■■□□□ 1.2
SERPINA1-210ENST00000489769 RB1CC1Q8TDY2 1594 aa22.58■■□□□ 1.2
SERPINA1-210ENST00000489769 DCAF1Q9Y4B6 1507 aa22.46■■□□□ 1.19
SERPINA1-210ENST00000489769 MYO15BQ96JP2 1530 aa22.44■■□□□ 1.18
SERPINA1-210ENST00000489769 UNC13AQ9UPW8 1703 aa22.2■■□□□ 1.14
SERPINA1-210ENST00000489769 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
SERPINA1-210ENST00000489769 PABPN1Q86U42 306 aaKnown RBP eCLIP21.99■■□□□ 1.11
SERPINA1-210ENST00000489769 BICRAQ9NZM4 1560 aa21.92■■□□□ 1.1
SERPINA1-210ENST00000489769 SHROOM4Q9ULL8 1493 aa21.79■■□□□ 1.08
SERPINA1-210ENST00000489769 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
SERPINA1-210ENST00000489769 EIF4G1Q04637 1599 aaKnown RBP21.31■■□□□ 1
SERPINA1-210ENST00000489769 CECR2Q9BXF3 1484 aa21.24■□□□□ 0.99
SERPINA1-210ENST00000489769 CC2D2AQ9P2K1 1620 aa21.2■□□□□ 0.98
SERPINA1-210ENST00000489769 SMARCA4P51532 1647 aa21.1■□□□□ 0.97
SERPINA1-210ENST00000489769 BAZ1AQ9NRL2 1556 aaPredicted RBP21.08■□□□□ 0.96
SERPINA1-210ENST00000489769 MROH2BQ7Z745 1585 aa21.03■□□□□ 0.96
SERPINA1-210ENST00000489769 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
SERPINA1-210ENST00000489769 WIZO95785 1651 aa20.87■□□□□ 0.93
SERPINA1-210ENST00000489769 SMARCA2P51531 1590 aa20.87■□□□□ 0.93
SERPINA1-210ENST00000489769 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
SERPINA1-210ENST00000489769 PEG3Q9GZU2 1588 aa20.83■□□□□ 0.92
SERPINA1-210ENST00000489769 NCAPD3P42695 1498 aa20.82■□□□□ 0.92
SERPINA1-210ENST00000489769 BAZ1BQ9UIG0 1483 aaKnown RBP20.76■□□□□ 0.91
SERPINA1-210ENST00000489769 HMGXB3Q12766 1538 aa20.74■□□□□ 0.91
SERPINA1-210ENST00000489769 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
SERPINA1-210ENST00000489769 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
SERPINA1-210ENST00000489769 NESP48681 1621 aa20.37■□□□□ 0.85
SERPINA1-210ENST00000489769 CCDC88BA6NC98 1476 aa20.36■□□□□ 0.85
SERPINA1-210ENST00000489769 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
SERPINA1-210ENST00000489769 LAMC3Q9Y6N6 1575 aa20.26■□□□□ 0.83
SERPINA1-210ENST00000489769 CFTRP13569 1480 aa20.17■□□□□ 0.82
SERPINA1-210ENST00000489769 ERCC6Q03468 1493 aa20.16■□□□□ 0.82
SERPINA1-210ENST00000489769 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
SERPINA1-210ENST00000489769 PRDM2Q13029 1718 aa20.12■□□□□ 0.81
SERPINA1-210ENST00000489769 PDS5BQ9NTI5 1447 aa20.11■□□□□ 0.81
SERPINA1-210ENST00000489769 FANCD2Q9BXW9 1451 aa20.04■□□□□ 0.8
SERPINA1-210ENST00000489769 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
SERPINA1-210ENST00000489769 THOC2Q8NI27 1593 aaKnown RBP19.95■□□□□ 0.78
SERPINA1-210ENST00000489769 MRC2Q9UBG0 1479 aa19.9■□□□□ 0.78
SERPINA1-210ENST00000489769 URB2Q14146 1524 aaKnown RBP19.84■□□□□ 0.77
SERPINA1-210ENST00000489769 WDR62O43379 1518 aa19.82■□□□□ 0.76
SERPINA1-210ENST00000489769 CUX2O14529 1486 aa19.78■□□□□ 0.76
SERPINA1-210ENST00000489769 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
SERPINA1-210ENST00000489769 ABCC8Q09428 1581 aa19.75■□□□□ 0.75
SERPINA1-210ENST00000489769 DNMBPQ6XZF7 1577 aa19.74■□□□□ 0.75
SERPINA1-210ENST00000489769 CUX1P39880 1505 aa19.71■□□□□ 0.75
SERPINA1-210ENST00000489769 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.74
SERPINA1-210ENST00000489769 SYNJ1O43426 1573 aa19.63■□□□□ 0.73
SERPINA1-210ENST00000489769 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
SERPINA1-210ENST00000489769 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
SERPINA1-210ENST00000489769 TOP2BQ02880 1626 aa19.58■□□□□ 0.73
SERPINA1-210ENST00000489769 BIVM-ERCC5R4GMW8 1640 aa19.58■□□□□ 0.73
SERPINA1-210ENST00000489769 RAD54L2Q9Y4B4 1467 aa19.57■□□□□ 0.72
SERPINA1-210ENST00000489769 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
SERPINA1-210ENST00000489769 SOGA1O94964 1423 aa19.53■□□□□ 0.72
SERPINA1-210ENST00000489769 TARBP1Q13395 1621 aaKnown RBP19.53■□□□□ 0.72
SERPINA1-210ENST00000489769 ZNF608Q9ULD9 1512 aaPredicted RBP19.51■□□□□ 0.71
SERPINA1-210ENST00000489769 TDRD9Q8NDG6 1382 aaKnown RBP19.43■□□□□ 0.7
SERPINA1-210ENST00000489769 AQRO60306 1485 aaKnown RBP eCLIP19.43■□□□□ 0.71e-14■■□□□ 13.6
SERPINA1-210ENST00000489769 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
SERPINA1-210ENST00000489769 EIF4G3O43432 1585 aaKnown RBP19.42■□□□□ 0.7
SERPINA1-210ENST00000489769 TRIM41Q8WV44 630 aa19.4■□□□□ 0.7
SERPINA1-210ENST00000489769 ABCA10Q8WWZ4 1543 aa19.38■□□□□ 0.69
SERPINA1-210ENST00000489769 ABCA5Q8WWZ7 1642 aa19.31■□□□□ 0.68
SERPINA1-210ENST00000489769 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
SERPINA1-210ENST00000489769 GAPVD1Q14C86 1478 aa19.31■□□□□ 0.68
SERPINA1-210ENST00000489769 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
SERPINA1-210ENST00000489769 GRIN2BQ13224 1484 aa19.24■□□□□ 0.67
SERPINA1-210ENST00000489769 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
SERPINA1-210ENST00000489769 KIF27Q86VH2 1401 aa19.2■□□□□ 0.66
SERPINA1-210ENST00000489769 CHD1O14646 1710 aa19.19■□□□□ 0.66
SERPINA1-210ENST00000489769 RUSC2Q8N2Y8 1516 aa19.19■□□□□ 0.66
SERPINA1-210ENST00000489769 FBLN2P98095 1184 aa19.19■□□□□ 0.66
SERPINA1-210ENST00000489769 MAGI1Q96QZ7 1491 aaPredicted RBP19.15■□□□□ 0.66
SERPINA1-210ENST00000489769 ERICH3Q5RHP9 1530 aa19.15■□□□□ 0.66
SERPINA1-210ENST00000489769 CHMP7Q8WUX9 453 aaPredicted RBP19.12■□□□□ 0.65
SERPINA1-210ENST00000489769 IGF1RP08069 1367 aa19.12■□□□□ 0.65
SERPINA1-210ENST00000489769 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
SERPINA1-210ENST00000489769 SYNJ2O15056 1496 aa19.1■□□□□ 0.65
SERPINA1-210ENST00000489769 OSCARQ8IYS5 282 aa19.08■□□□□ 0.65
SERPINA1-210ENST00000489769 FAM9AQ8IZU1 332 aaPredicted RBP19.07■□□□□ 0.64
SERPINA1-210ENST00000489769 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
SERPINA1-210ENST00000489769 CUL7Q14999 1698 aa19.04■□□□□ 0.64
SERPINA1-210ENST00000489769 CARMIL1Q5VZK9 1371 aa19.01■□□□□ 0.63
SERPINA1-210ENST00000489769 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
SERPINA1-210ENST00000489769 DNAJC5Q9H3Z4 198 aa18.98■□□□□ 0.63
SERPINA1-210ENST00000489769 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
SERPINA1-210ENST00000489769 EEA1Q15075 1411 aa18.94■□□□□ 0.62
SERPINA1-210ENST00000489769 CEP170Q5SW79 1584 aa18.94■□□□□ 0.62
SERPINA1-210ENST00000489769 RAPGEF2Q9Y4G8 1499 aa18.91■□□□□ 0.62
SERPINA1-210ENST00000489769 NUP160Q12769 1436 aa18.89■□□□□ 0.61
SERPINA1-210ENST00000489769 CLASP1Q7Z460 1538 aa18.89■□□□□ 0.61
SERPINA1-210ENST00000489769 PRXQ9BXM0 1461 aa18.88■□□□□ 0.61
SERPINA1-210ENST00000489769 EHMT2Q96KQ7 1210 aa18.88■□□□□ 0.61
SERPINA1-210ENST00000489769 CTTNBP2Q8WZ74 1663 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms