RNA–Protein interactions for RNA: ENST00000542506.5

FADS1-216, Transcript of fatty acid desaturase 1, humanhuman

TSL 2 BASIC

Gene FADS1, Length 1,725 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FADS1-216ENST00000542506 NISCHQ9Y2I1 1504 aa38.36■■■■□ 3.73
FADS1-216ENST00000542506 CCDC180Q9P1Z9 1646 aa33.7■■■□□ 2.99
FADS1-216ENST00000542506 ZCCHC6Q5VYS8 1495 aaKnown RBP32.18■■■□□ 2.74
FADS1-216ENST00000542506 ABCC9O60706 1549 aa32.1■■■□□ 2.73
FADS1-216ENST00000542506 DCAF1Q9Y4B6 1507 aa31.76■■■□□ 2.68
FADS1-216ENST00000542506 DCAF8L2P0C7V8 631 aa31.63■■■□□ 2.65
FADS1-216ENST00000542506 MYO15BQ96JP2 1530 aa31.53■■■□□ 2.64
FADS1-216ENST00000542506 NACADO15069 1562 aa31.43■■■□□ 2.62
FADS1-216ENST00000542506 RB1CC1Q8TDY2 1594 aa31.25■■■□□ 2.59
FADS1-216ENST00000542506 SHROOM4Q9ULL8 1493 aa30.93■■■□□ 2.54
FADS1-216ENST00000542506 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
FADS1-216ENST00000542506 UNC13AQ9UPW8 1703 aa30.61■■■□□ 2.49
FADS1-216ENST00000542506 BICRAQ9NZM4 1560 aa30.32■■■□□ 2.44
FADS1-216ENST00000542506 PABPN1Q86U42 306 aaKnown RBP eCLIP30.13■■■□□ 2.41
FADS1-216ENST00000542506 CECR2Q9BXF3 1484 aa29.81■■■□□ 2.36
FADS1-216ENST00000542506 BAZ1AQ9NRL2 1556 aaPredicted RBP29.67■■■□□ 2.34
FADS1-216ENST00000542506 MROH2BQ7Z745 1585 aa29.62■■■□□ 2.33
FADS1-216ENST00000542506 RSF1Q96T23 1441 aaPredicted RBP29.59■■■□□ 2.33
FADS1-216ENST00000542506 SMARCA4P51532 1647 aa29.59■■■□□ 2.33
FADS1-216ENST00000542506 SUPT5HO00267 1087 aaKnown RBP29.53■■■□□ 2.32
FADS1-216ENST00000542506 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
FADS1-216ENST00000542506 WIZO95785 1651 aa29.35■■■□□ 2.29
FADS1-216ENST00000542506 PEG3Q9GZU2 1588 aa29.27■■■□□ 2.28
FADS1-216ENST00000542506 ATAD2BQ9ULI0 1458 aa29.17■■■□□ 2.26
FADS1-216ENST00000542506 SMARCA2P51531 1590 aa29.17■■■□□ 2.26
FADS1-216ENST00000542506 TOP2AP11388 1531 aaKnown RBP29.08■■■□□ 2.24
FADS1-216ENST00000542506 CC2D2AQ9P2K1 1620 aa29.07■■■□□ 2.24
FADS1-216ENST00000542506 NCAPD3P42695 1498 aa28.99■■■□□ 2.23
FADS1-216ENST00000542506 BAZ1BQ9UIG0 1483 aaKnown RBP28.99■■■□□ 2.23
FADS1-216ENST00000542506 HMGXB3Q12766 1538 aa28.96■■■□□ 2.23
FADS1-216ENST00000542506 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
FADS1-216ENST00000542506 DNAJC5BQ9UF47 199 aa28.6■■■□□ 2.17
FADS1-216ENST00000542506 CFTRP13569 1480 aa28.24■■■□□ 2.11
FADS1-216ENST00000542506 CADPSQ9ULU8 1353 aa28.19■■■□□ 2.1
FADS1-216ENST00000542506 PRDM2Q13029 1718 aa28.13■■■□□ 2.09
FADS1-216ENST00000542506 CHIC1Q5VXU3 224 aa28.11■■■□□ 2.09
FADS1-216ENST00000542506 LAMC3Q9Y6N6 1575 aa28.09■■■□□ 2.09
FADS1-216ENST00000542506 NESP48681 1621 aa28.07■■■□□ 2.08
FADS1-216ENST00000542506 ABCC8Q09428 1581 aa28■■■□□ 2.07
FADS1-216ENST00000542506 FANCD2Q9BXW9 1451 aa27.9■■■□□ 2.06
FADS1-216ENST00000542506 WRNQ14191 1432 aaPredicted RBP eCLIP27.86■■■□□ 2.05
FADS1-216ENST00000542506 PDS5BQ9NTI5 1447 aa27.84■■■□□ 2.05
FADS1-216ENST00000542506 TRIM41Q8WV44 630 aa27.81■■■□□ 2.04
FADS1-216ENST00000542506 SYNJ1O43426 1573 aa27.8■■■□□ 2.04
FADS1-216ENST00000542506 CEP164Q9UPV0 1460 aa27.78■■■□□ 2.04
FADS1-216ENST00000542506 KIF21AQ7Z4S6 1674 aa27.77■■■□□ 2.04
FADS1-216ENST00000542506 CUX1P39880 1505 aa27.73■■■□□ 2.03
FADS1-216ENST00000542506 TOP2BQ02880 1626 aa27.72■■■□□ 2.03
FADS1-216ENST00000542506 BIVM-ERCC5R4GMW8 1640 aa27.72■■■□□ 2.03
FADS1-216ENST00000542506 DNMBPQ6XZF7 1577 aa27.61■■■□□ 2.01
FADS1-216ENST00000542506 URB2Q14146 1524 aaKnown RBP27.59■■■□□ 2.01
FADS1-216ENST00000542506 TOPBP1Q92547 1522 aa27.57■■■□□ 2
FADS1-216ENST00000542506 ERCC6Q03468 1493 aa27.56■■■□□ 2
FADS1-216ENST00000542506 MRC2Q9UBG0 1479 aa27.54■■■□□ 2
FADS1-216ENST00000542506 FGD5Q6ZNL6 1462 aa27.47■■□□□ 1.99
FADS1-216ENST00000542506 THOC2Q8NI27 1593 aaKnown RBP27.45■■□□□ 1.98
FADS1-216ENST00000542506 WDR62O43379 1518 aa27.43■■□□□ 1.98
FADS1-216ENST00000542506 POLA1P09884 1462 aaPredicted RBP27.4■■□□□ 1.98
FADS1-216ENST00000542506 SOGA1O94964 1423 aa27.37■■□□□ 1.97
FADS1-216ENST00000542506 RUSC2Q8N2Y8 1516 aa27.29■■□□□ 1.96
FADS1-216ENST00000542506 EEA1Q15075 1411 aa27.29■■□□□ 1.96
FADS1-216ENST00000542506 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
FADS1-216ENST00000542506 FAM9AQ8IZU1 332 aaPredicted RBP27.27■■□□□ 1.96
FADS1-216ENST00000542506 WDR97A6NE52 1622 aa27.23■■□□□ 1.95
FADS1-216ENST00000542506 ABCA10Q8WWZ4 1543 aa27.23■■□□□ 1.95
FADS1-216ENST00000542506 CUX2O14529 1486 aa27.22■■□□□ 1.95
FADS1-216ENST00000542506 TARBP1Q13395 1621 aaKnown RBP27.21■■□□□ 1.95
FADS1-216ENST00000542506 KIF27Q86VH2 1401 aa27.19■■□□□ 1.94
FADS1-216ENST00000542506 IFT140Q96RY7 1462 aa27.13■■□□□ 1.93
FADS1-216ENST00000542506 CSRNP3Q8WYN3 585 aa27.09■■□□□ 1.93
FADS1-216ENST00000542506 ABCA5Q8WWZ7 1642 aa27.08■■□□□ 1.93
FADS1-216ENST00000542506 TDRD9Q8NDG6 1382 aaKnown RBP27.02■■□□□ 1.92
FADS1-216ENST00000542506 GAPVD1Q14C86 1478 aa26.99■■□□□ 1.91
FADS1-216ENST00000542506 ZNF608Q9ULD9 1512 aaPredicted RBP26.98■■□□□ 1.91
FADS1-216ENST00000542506 KIF21BO75037 1637 aa26.98■■□□□ 1.91
FADS1-216ENST00000542506 LOC105371045A0A1W2PR82 267 aa26.97■■□□□ 1.91
FADS1-216ENST00000542506 IGF1RP08069 1367 aa26.96■■□□□ 1.91
FADS1-216ENST00000542506 PRXQ9BXM0 1461 aa26.93■■□□□ 1.9
FADS1-216ENST00000542506 EIF4G3O43432 1585 aaKnown RBP26.93■■□□□ 1.9
FADS1-216ENST00000542506 AQRO60306 1485 aaKnown RBP eCLIP26.92■■□□□ 1.91e-8■■■■■ 33.4
FADS1-216ENST00000542506 ERICH3Q5RHP9 1530 aa26.92■■□□□ 1.9
FADS1-216ENST00000542506 PBRM1Q86U86 1689 aa26.91■■□□□ 1.9
FADS1-216ENST00000542506 GOLGA3Q08378 1498 aa26.89■■□□□ 1.89
FADS1-216ENST00000542506 CUL7Q14999 1698 aa26.87■■□□□ 1.89
FADS1-216ENST00000542506 EHMT2Q96KQ7 1210 aa26.86■■□□□ 1.89
FADS1-216ENST00000542506 GRIN2BQ13224 1484 aa26.85■■□□□ 1.89
FADS1-216ENST00000542506 RAPGEF2Q9Y4G8 1499 aa26.85■■□□□ 1.89
FADS1-216ENST00000542506 CARMIL1Q5VZK9 1371 aa26.83■■□□□ 1.88
FADS1-216ENST00000542506 ADAMTS12P58397 1594 aa26.76■■□□□ 1.87
FADS1-216ENST00000542506 SNAPC4Q5SXM2 1469 aa26.72■■□□□ 1.87
FADS1-216ENST00000542506 TNIKQ9UKE5 1360 aa26.7■■□□□ 1.87
FADS1-216ENST00000542506 FHAD1B1AJZ9 1412 aa26.7■■□□□ 1.86
FADS1-216ENST00000542506 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
FADS1-216ENST00000542506 UBTFP17480 764 aaKnown RBP26.68■■□□□ 1.86
FADS1-216ENST00000542506 SYNJ2O15056 1496 aa26.57■■□□□ 1.84
FADS1-216ENST00000542506 CEP162Q5TB80 1403 aa26.54■■□□□ 1.84
FADS1-216ENST00000542506 GRIN2AQ12879 1464 aa26.53■■□□□ 1.84
FADS1-216ENST00000542506 CTTNBP2Q8WZ74 1663 aa26.52■■□□□ 1.84
FADS1-216ENST00000542506 CHMP7Q8WUX9 453 aaPredicted RBP26.44■■□□□ 1.82
FADS1-216ENST00000542506 CLIP1P30622 1438 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms