RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 NISCHQ9Y2I1 1504 aa40.51■■■■■ 4.08
NPM1-201ENST00000296930 CCDC180Q9P1Z9 1646 aa36.28■■■■□ 3.4
NPM1-201ENST00000296930 ABCC9O60706 1549 aa35.97■■■■□ 3.35
NPM1-201ENST00000296930 RB1CC1Q8TDY2 1594 aa34.41■■■■□ 3.1
NPM1-201ENST00000296930 NACADO15069 1562 aa34.23■■■■□ 3.07
NPM1-201ENST00000296930 DCAF8L2P0C7V8 631 aa34.06■■■■□ 3.04
NPM1-201ENST00000296930 MYO15BQ96JP2 1530 aa33.85■■■■□ 3.01
NPM1-201ENST00000296930 UNC13AQ9UPW8 1703 aa33.63■■■□□ 2.97
NPM1-201ENST00000296930 ZCCHC6Q5VYS8 1495 aaKnown RBP33.62■■■□□ 2.97
NPM1-201ENST00000296930 PABPN1Q86U42 306 aaKnown RBP eCLIP33.51■■■□□ 2.95
NPM1-201ENST00000296930 DCAF1Q9Y4B6 1507 aa33.5■■■□□ 2.95
NPM1-201ENST00000296930 DNAJC5BQ9UF47 199 aa33.48■■■□□ 2.95
NPM1-201ENST00000296930 BICRAQ9NZM4 1560 aa33.35■■■□□ 2.93
NPM1-201ENST00000296930 SCRIBQ14160 1630 aa33.03■■■□□ 2.88
NPM1-201ENST00000296930 SHROOM4Q9ULL8 1493 aa33■■■□□ 2.87
NPM1-201ENST00000296930 CC2D2AQ9P2K1 1620 aa32.53■■■□□ 2.8
NPM1-201ENST00000296930 EIF4G1Q04637 1599 aaKnown RBP32.52■■■□□ 2.8
NPM1-201ENST00000296930 CECR2Q9BXF3 1484 aa32.39■■■□□ 2.78
NPM1-201ENST00000296930 NCAPD3P42695 1498 aa31.58■■■□□ 2.65
NPM1-201ENST00000296930 SMARCA4P51532 1647 aa31.56■■■□□ 2.64
NPM1-201ENST00000296930 ATAD2BQ9ULI0 1458 aa31.51■■■□□ 2.63
NPM1-201ENST00000296930 SMARCA2P51531 1590 aa31.46■■■□□ 2.63
NPM1-201ENST00000296930 BAZ1AQ9NRL2 1556 aaPredicted RBP31.45■■■□□ 2.62
NPM1-201ENST00000296930 HMGXB3Q12766 1538 aa31.39■■■□□ 2.61
NPM1-201ENST00000296930 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.59
NPM1-201ENST00000296930 BAZ1BQ9UIG0 1483 aaKnown RBP31.23■■■□□ 2.59
NPM1-201ENST00000296930 MROH2BQ7Z745 1585 aa31.2■■■□□ 2.58
NPM1-201ENST00000296930 ERCC6Q03468 1493 aa31.06■■■□□ 2.56
NPM1-201ENST00000296930 NESP48681 1621 aa30.96■■■□□ 2.55
NPM1-201ENST00000296930 CUX2O14529 1486 aa30.94■■■□□ 2.54
NPM1-201ENST00000296930 WIZO95785 1651 aa30.85■■■□□ 2.53
NPM1-201ENST00000296930 LAMC3Q9Y6N6 1575 aa30.85■■■□□ 2.53
NPM1-201ENST00000296930 PDS5BQ9NTI5 1447 aa30.66■■■□□ 2.5
NPM1-201ENST00000296930 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.5
NPM1-201ENST00000296930 THOC2Q8NI27 1593 aaKnown RBP30.63■■■□□ 2.49
NPM1-201ENST00000296930 CADPSQ9ULU8 1353 aa30.63■■■□□ 2.49
NPM1-201ENST00000296930 KIF21AQ7Z4S6 1674 aa30.61■■■□□ 2.49
NPM1-201ENST00000296930 DNAJC5Q9H3Z4 198 aa30.61■■■□□ 2.49
NPM1-201ENST00000296930 TOP2AP11388 1531 aaKnown RBP30.49■■■□□ 2.47
NPM1-201ENST00000296930 MRC2Q9UBG0 1479 aa30.36■■■□□ 2.45
NPM1-201ENST00000296930 CFTRP13569 1480 aa30.33■■■□□ 2.45
NPM1-201ENST00000296930 CEP164Q9UPV0 1460 aa30.29■■■□□ 2.44
NPM1-201ENST00000296930 WDR62O43379 1518 aa30.28■■■□□ 2.44
NPM1-201ENST00000296930 FANCD2Q9BXW9 1451 aa30.28■■■□□ 2.44
NPM1-201ENST00000296930 CCDC88BA6NC98 1476 aa30.12■■■□□ 2.41
NPM1-201ENST00000296930 PRDM2Q13029 1718 aa30.11■■■□□ 2.41
NPM1-201ENST00000296930 URB2Q14146 1524 aaKnown RBP30■■■□□ 2.39
NPM1-201ENST00000296930 TOPBP1Q92547 1522 aa29.73■■■□□ 2.35
NPM1-201ENST00000296930 ABCC8Q09428 1581 aa29.73■■■□□ 2.35
NPM1-201ENST00000296930 IFT140Q96RY7 1462 aa29.68■■■□□ 2.34
NPM1-201ENST00000296930 DNMBPQ6XZF7 1577 aa29.66■■■□□ 2.34
NPM1-201ENST00000296930 ZNF608Q9ULD9 1512 aaPredicted RBP29.57■■■□□ 2.32
NPM1-201ENST00000296930 OSCARQ8IYS5 282 aa29.56■■■□□ 2.32
NPM1-201ENST00000296930 SUPT5HO00267 1087 aaKnown RBP29.47■■■□□ 2.31
NPM1-201ENST00000296930 TARBP1Q13395 1621 aaKnown RBP29.45■■■□□ 2.31
NPM1-201ENST00000296930 EIF4G3O43432 1585 aaKnown RBP29.45■■■□□ 2.31
NPM1-201ENST00000296930 POLA1P09884 1462 aaPredicted RBP29.44■■■□□ 2.3
NPM1-201ENST00000296930 AQRO60306 1485 aaKnown RBP eCLIP29.34■■■□□ 2.292e-9■■■■□ 24.5
NPM1-201ENST00000296930 TRIM41Q8WV44 630 aa29.34■■■□□ 2.29
NPM1-201ENST00000296930 SOGA1O94964 1423 aa29.31■■■□□ 2.28
NPM1-201ENST00000296930 RAD54L2Q9Y4B4 1467 aa29.31■■■□□ 2.28
NPM1-201ENST00000296930 CUX1P39880 1505 aa29.3■■■□□ 2.28
NPM1-201ENST00000296930 FGD5Q6ZNL6 1462 aa29.29■■■□□ 2.28
NPM1-201ENST00000296930 WDR97A6NE52 1622 aa29.22■■■□□ 2.27
NPM1-201ENST00000296930 TDRD9Q8NDG6 1382 aaKnown RBP29.21■■■□□ 2.27
NPM1-201ENST00000296930 CHD1O14646 1710 aa29.2■■■□□ 2.27
NPM1-201ENST00000296930 RIMBP3CA6NJZ7 1639 aa29.14■■■□□ 2.26
NPM1-201ENST00000296930 RIMBP3BA6NNM3 1639 aa29.14■■■□□ 2.26
NPM1-201ENST00000296930 RIMBP3Q9UFD9 1639 aa29.14■■■□□ 2.26
NPM1-201ENST00000296930 FBLN2P98095 1184 aa29.11■■■□□ 2.25
NPM1-201ENST00000296930 ARHGEF11O15085 1522 aa29.07■■■□□ 2.24
NPM1-201ENST00000296930 SNAPC4Q5SXM2 1469 aa29.06■■■□□ 2.24
NPM1-201ENST00000296930 GRIN2BQ13224 1484 aa29.05■■■□□ 2.24
NPM1-201ENST00000296930 MAGI1Q96QZ7 1491 aaPredicted RBP29.03■■■□□ 2.24
NPM1-201ENST00000296930 ABCA10Q8WWZ4 1543 aa28.99■■■□□ 2.23
NPM1-201ENST00000296930 GAPVD1Q14C86 1478 aa28.97■■■□□ 2.23
NPM1-201ENST00000296930 PBRM1Q86U86 1689 aa28.96■■■□□ 2.23
NPM1-201ENST00000296930 CHMP7Q8WUX9 453 aaPredicted RBP28.96■■■□□ 2.23
NPM1-201ENST00000296930 BIVM-ERCC5R4GMW8 1640 aa28.94■■■□□ 2.22
NPM1-201ENST00000296930 TOP2BQ02880 1626 aa28.93■■■□□ 2.22
NPM1-201ENST00000296930 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.223e-7■■□□□ 13.1
NPM1-201ENST00000296930 ABCA5Q8WWZ7 1642 aa28.92■■■□□ 2.22
NPM1-201ENST00000296930 SYNJ2O15056 1496 aa28.92■■■□□ 2.22
NPM1-201ENST00000296930 SYNJ1O43426 1573 aa28.89■■■□□ 2.22
NPM1-201ENST00000296930 CLASP1Q7Z460 1538 aa28.86■■■□□ 2.21
NPM1-201ENST00000296930 CYB5RLQ6IPT4 315 aa28.83■■■□□ 2.21
NPM1-201ENST00000296930 ARAP1Q96P48 1450 aa28.79■■■□□ 2.2
NPM1-201ENST00000296930 ADAMTS12P58397 1594 aa28.68■■■□□ 2.18
NPM1-201ENST00000296930 GRIN2AQ12879 1464 aa28.67■■■□□ 2.18
NPM1-201ENST00000296930 ERICH3Q5RHP9 1530 aa28.65■■■□□ 2.18
NPM1-201ENST00000296930 FHAD1B1AJZ9 1412 aa28.62■■■□□ 2.17
NPM1-201ENST00000296930 NUP160Q12769 1436 aa28.56■■■□□ 2.16
NPM1-201ENST00000296930 CEP170Q5SW79 1584 aa28.54■■■□□ 2.16
NPM1-201ENST00000296930 AEBP2Q6ZN18 517 aaPredicted RBP28.44■■■□□ 2.14
NPM1-201ENST00000296930 TRHP20396 242 aaPredicted RBP28.43■■■□□ 2.14
NPM1-201ENST00000296930 SHROOM2Q13796 1616 aa28.42■■■□□ 2.14
NPM1-201ENST00000296930 ERCC6L2Q5T890 1561 aa28.39■■■□□ 2.14
NPM1-201ENST00000296930 KIF27Q86VH2 1401 aa28.37■■■□□ 2.13
NPM1-201ENST00000296930 IGF1RP08069 1367 aa28.31■■■□□ 2.12
NPM1-201ENST00000296930 CUL7Q14999 1698 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms