RNA–Protein interactions for RNA: ENST00000369983.3

GBF1-201, Transcript of golgi brefeldin A resistant guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBF1, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1-201ENST00000369983 DCAF8L2P0C7V8 631 aa23.12■■□□□ 1.29
GBF1-201ENST00000369983 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
GBF1-201ENST00000369983 FAM9AQ8IZU1 332 aaPredicted RBP21.25■□□□□ 0.99
GBF1-201ENST00000369983 NISCHQ9Y2I1 1504 aa20.98■□□□□ 0.95
GBF1-201ENST00000369983 APLP2Q06481 763 aa20.98■□□□□ 0.95
GBF1-201ENST00000369983 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
GBF1-201ENST00000369983 PELP1Q8IZL8 1130 aaKnown RBP20.88■□□□□ 0.93
GBF1-201ENST00000369983 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
GBF1-201ENST00000369983 ATP1B4Q9UN42 357 aaPredicted RBP20.32■□□□□ 0.84
GBF1-201ENST00000369983 RANGAP1P46060 587 aaPredicted RBP20.23■□□□□ 0.83
GBF1-201ENST00000369983 TTBK1Q5TCY1 1321 aaPredicted RBP20.21■□□□□ 0.83
GBF1-201ENST00000369983 ERICH6Q7L0X2 663 aa20.02■□□□□ 0.8
GBF1-201ENST00000369983 CCER1Q8TC90 406 aaPredicted RBP20■□□□□ 0.79
GBF1-201ENST00000369983 MYT1LQ9UL68 1186 aa19.98■□□□□ 0.79
GBF1-201ENST00000369983 UBTFP17480 764 aaKnown RBP19.81■□□□□ 0.76
GBF1-201ENST00000369983 PCGF6Q9BYE7 350 aa19.81■□□□□ 0.76
GBF1-201ENST00000369983 TRIM41Q8WV44 630 aa19.78■□□□□ 0.76
GBF1-201ENST00000369983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
GBF1-201ENST00000369983 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
GBF1-201ENST00000369983 CENPBP07199 599 aaPredicted RBP19.63■□□□□ 0.73
GBF1-201ENST00000369983 NEFLP07196 543 aa19.6■□□□□ 0.73
GBF1-201ENST00000369983 ZEB1P37275 1124 aaPredicted RBP19.56■□□□□ 0.72
GBF1-201ENST00000369983 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
GBF1-201ENST00000369983 POLR3GLQ9BT43 218 aa19.4■□□□□ 0.7
GBF1-201ENST00000369983 SLC4A1APQ9BWU0 796 aaKnown RBP19.36■□□□□ 0.69
GBF1-201ENST00000369983 DAXXQ9UER7 740 aaPredicted RBP19.32■□□□□ 0.68
GBF1-201ENST00000369983 ITGAEP38570 1179 aa19.22■□□□□ 0.67
GBF1-201ENST00000369983 YTHDC1Q96MU7 727 aaKnown RBP19.18■□□□□ 0.66
GBF1-201ENST00000369983 PPARGC1BQ86YN6 1023 aaKnown RBP19.04■□□□□ 0.64
GBF1-201ENST00000369983 CNGB1Q14028 1251 aaPredicted RBP19.04■□□□□ 0.64
GBF1-201ENST00000369983 BCANQ96GW7 911 aa18.88■□□□□ 0.61
GBF1-201ENST00000369983 CLSPNQ9HAW4 1339 aa18.87■□□□□ 0.61
GBF1-201ENST00000369983 FBLN2P98095 1184 aa18.83■□□□□ 0.6
GBF1-201ENST00000369983 SLC24A1O60721 1099 aa18.8■□□□□ 0.6
GBF1-201ENST00000369983 TRIM52Q96A61 297 aa18.8■□□□□ 0.6
GBF1-201ENST00000369983 ZNF316A6NFI3 1004 aaPredicted RBP18.78■□□□□ 0.6
GBF1-201ENST00000369983 ZBTB47Q9UFB7 747 aaPredicted RBP18.78■□□□□ 0.6
GBF1-201ENST00000369983 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
GBF1-201ENST00000369983 MYT1Q01538 1121 aa18.74■□□□□ 0.59
GBF1-201ENST00000369983 TRIM26Q12899 539 aaPredicted RBP18.73■□□□□ 0.59
GBF1-201ENST00000369983 ESF1Q9H501 851 aaKnown RBP18.69■□□□□ 0.58
GBF1-201ENST00000369983 ABCC9O60706 1549 aa18.68■□□□□ 0.58
GBF1-201ENST00000369983 PABPN1Q86U42 306 aaKnown RBP eCLIP18.67■□□□□ 0.58
GBF1-201ENST00000369983 NEFMP07197 916 aa18.65■□□□□ 0.58
GBF1-201ENST00000369983 ZNF326Q5BKZ1 582 aaKnown RBP18.56■□□□□ 0.56
GBF1-201ENST00000369983 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
GBF1-201ENST00000369983 PLPPR3Q6T4P5 718 aa18.48■□□□□ 0.55
GBF1-201ENST00000369983 CANXP27824 592 aaKnown RBP18.47■□□□□ 0.55
GBF1-201ENST00000369983 NEUROD1Q13562 356 aa18.45■□□□□ 0.54
GBF1-201ENST00000369983 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
GBF1-201ENST00000369983 NPM1P06748 294 aaKnown RBP eCLIP18.44■□□□□ 0.54
GBF1-201ENST00000369983 BCL11AQ9H165 835 aa18.42■□□□□ 0.54
GBF1-201ENST00000369983 CDK11AQ9UQ88 783 aaPredicted RBP18.34■□□□□ 0.53
GBF1-201ENST00000369983 ZNF777Q9ULD5 760 aaPredicted RBP18.31■□□□□ 0.52
GBF1-201ENST00000369983 LOC105371045A0A1W2PR82 267 aa18.31■□□□□ 0.52
GBF1-201ENST00000369983 ARID3CA6NKF2 412 aa18.31■□□□□ 0.52
GBF1-201ENST00000369983 HRCP23327 699 aa18.3■□□□□ 0.52
GBF1-201ENST00000369983 CHGAP10645 457 aaKnown RBP18.27■□□□□ 0.52
GBF1-201ENST00000369983 ANP32CO43423 234 aa18.26■□□□□ 0.51
GBF1-201ENST00000369983 SCAF1Q9H7N4 1312 aaKnown RBP18.19■□□□□ 0.5
GBF1-201ENST00000369983 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
GBF1-201ENST00000369983 A0A0G2JS52 829 aa18.13■□□□□ 0.49
GBF1-201ENST00000369983 DIEXFQ68CQ4 756 aaKnown RBP18.09■□□□□ 0.49
GBF1-201ENST00000369983 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
GBF1-201ENST00000369983 C14orf37Q86TY3 774 aa17.94■□□□□ 0.46
GBF1-201ENST00000369983 ZBTB7CA1YPR0 619 aa17.93■□□□□ 0.46
GBF1-201ENST00000369983 HAP1P54257 671 aaPredicted RBP17.92■□□□□ 0.46
GBF1-201ENST00000369983 HSP90AA1P07900 732 aaKnown RBP17.92■□□□□ 0.46
GBF1-201ENST00000369983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.466e-7■■■■□ 20.2
GBF1-201ENST00000369983 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
GBF1-201ENST00000369983 CDK11BP21127 795 aaKnown RBP17.89■□□□□ 0.45
GBF1-201ENST00000369983 ANP32BQ92688 251 aaKnown RBP17.89■□□□□ 0.45
GBF1-201ENST00000369983 PPP1R15AO75807 674 aaPredicted RBP17.86■□□□□ 0.45
GBF1-201ENST00000369983 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
GBF1-201ENST00000369983 PLEKHG5O94827 1062 aa17.83■□□□□ 0.44
GBF1-201ENST00000369983 UPF2Q9HAU5 1272 aaKnown RBP17.83■□□□□ 0.44
GBF1-201ENST00000369983 ARID4BQ4LE39 1312 aaPredicted RBP17.83■□□□□ 0.44
GBF1-201ENST00000369983 ANP32AP39687 249 aaKnown RBP17.81■□□□□ 0.44
GBF1-201ENST00000369983 SCRIBQ14160 1630 aa17.81■□□□□ 0.44
GBF1-201ENST00000369983 TSPY4P0CV99 314 aa17.8■□□□□ 0.44
GBF1-201ENST00000369983 TSPY10P0CW01 314 aa17.8■□□□□ 0.44
GBF1-201ENST00000369983 TONSLQ96HA7 1378 aa17.77■□□□□ 0.44
GBF1-201ENST00000369983 WDR43Q15061 677 aaKnown RBP eCLIP17.73■□□□□ 0.43
GBF1-201ENST00000369983 MYH16Q9H6N6 1097 aa17.71■□□□□ 0.43
GBF1-201ENST00000369983 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.7■□□□□ 0.42
GBF1-201ENST00000369983 ARXQ96QS3 562 aa17.67■□□□□ 0.42
GBF1-201ENST00000369983 NPHP1O15259 732 aa17.65■□□□□ 0.42
GBF1-201ENST00000369983 CHIC2Q9UKJ5 165 aa17.65■□□□□ 0.42
GBF1-201ENST00000369983 KCNH8Q96L42 1107 aa17.63■□□□□ 0.41
GBF1-201ENST00000369983 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
GBF1-201ENST00000369983 KDM2AQ9Y2K7 1162 aa17.63■□□□□ 0.41
GBF1-201ENST00000369983 SALL2Q9Y467 1007 aaPredicted RBP17.6■□□□□ 0.41
GBF1-201ENST00000369983 TMC1Q8TDI8 760 aa17.59■□□□□ 0.41
GBF1-201ENST00000369983 MTUS2Q5JR59 1369 aa17.59■□□□□ 0.41
GBF1-201ENST00000369983 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
GBF1-201ENST00000369983 ACIN1Q9UKV3 1341 aaKnown RBP17.57■□□□□ 0.4
GBF1-201ENST00000369983 FAM9BQ8IZU0 186 aa17.56■□□□□ 0.4
GBF1-201ENST00000369983 PLEKHD1A6NEE1 506 aa17.55■□□□□ 0.4
GBF1-201ENST00000369983 LMOD2Q6P5Q4 547 aa17.53■□□□□ 0.4
GBF1-201ENST00000369983 TULP1O00294 542 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms