RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 NISCHQ9Y2I1 1504 aa28.57■■■□□ 2.16
CLPB-209ENST00000538039 SHROOM4Q9ULL8 1493 aa24.91■■□□□ 1.58
CLPB-209ENST00000538039 SUPT5HO00267 1087 aaKnown RBP24.5■■□□□ 1.51
CLPB-209ENST00000538039 ZCCHC6Q5VYS8 1495 aaKnown RBP24.2■■□□□ 1.47
CLPB-209ENST00000538039 MYO15BQ96JP2 1530 aa24.03■■□□□ 1.44
CLPB-209ENST00000538039 CCDC180Q9P1Z9 1646 aa23.94■■□□□ 1.42
CLPB-209ENST00000538039 CHIC1Q5VXU3 224 aa23.89■■□□□ 1.42
CLPB-209ENST00000538039 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
CLPB-209ENST00000538039 HRCP23327 699 aa23.58■■□□□ 1.36
CLPB-209ENST00000538039 PCGF6Q9BYE7 350 aa23.51■■□□□ 1.35
CLPB-209ENST00000538039 LOC105371045A0A1W2PR82 267 aa23.39■■□□□ 1.33
CLPB-209ENST00000538039 PPARGC1BQ86YN6 1023 aaKnown RBP23.37■■□□□ 1.33
CLPB-209ENST00000538039 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
CLPB-209ENST00000538039 ABCC9O60706 1549 aa22.88■■□□□ 1.25
CLPB-209ENST00000538039 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
CLPB-209ENST00000538039 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
CLPB-209ENST00000538039 TRIM26Q12899 539 aaPredicted RBP22.78■■□□□ 1.24
CLPB-209ENST00000538039 FAM9AQ8IZU1 332 aaPredicted RBP22.69■■□□□ 1.22
CLPB-209ENST00000538039 RB1CC1Q8TDY2 1594 aa22.67■■□□□ 1.22
CLPB-209ENST00000538039 EHMT2Q96KQ7 1210 aa22.66■■□□□ 1.22
CLPB-209ENST00000538039 TRIM41Q8WV44 630 aa22.62■■□□□ 1.21
CLPB-209ENST00000538039 CECR2Q9BXF3 1484 aa22.49■■□□□ 1.19
CLPB-209ENST00000538039 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
CLPB-209ENST00000538039 WIZO95785 1651 aa22.28■■□□□ 1.16
CLPB-209ENST00000538039 ZEB1P37275 1124 aaPredicted RBP22.18■■□□□ 1.14
CLPB-209ENST00000538039 NACADO15069 1562 aa22.1■■□□□ 1.13
CLPB-209ENST00000538039 SCAF1Q9H7N4 1312 aaKnown RBP22.06■■□□□ 1.12
CLPB-209ENST00000538039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.05■■□□□ 1.12
CLPB-209ENST00000538039 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
CLPB-209ENST00000538039 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
CLPB-209ENST00000538039 TTBK1Q5TCY1 1321 aaPredicted RBP21.94■■□□□ 1.1
CLPB-209ENST00000538039 ABCC8Q09428 1581 aa21.94■■□□□ 1.1
CLPB-209ENST00000538039 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
CLPB-209ENST00000538039 CCER1Q8TC90 406 aaPredicted RBP21.82■■□□□ 1.08
CLPB-209ENST00000538039 SOGA1O94964 1423 aa21.79■■□□□ 1.08
CLPB-209ENST00000538039 RUSC2Q8N2Y8 1516 aa21.75■■□□□ 1.07
CLPB-209ENST00000538039 TOP2AP11388 1531 aaKnown RBP21.73■■□□□ 1.07
CLPB-209ENST00000538039 SMARCA2P51531 1590 aa21.72■■□□□ 1.07
CLPB-209ENST00000538039 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
CLPB-209ENST00000538039 CEP162Q5TB80 1403 aa21.69■■□□□ 1.06
CLPB-209ENST00000538039 NEUROD1Q13562 356 aa21.69■■□□□ 1.06
CLPB-209ENST00000538039 UNC13AQ9UPW8 1703 aa21.64■■□□□ 1.05
CLPB-209ENST00000538039 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
CLPB-209ENST00000538039 ACIN1Q9UKV3 1341 aaKnown RBP21.58■■□□□ 1.05
CLPB-209ENST00000538039 DIEXFQ68CQ4 756 aaKnown RBP21.57■■□□□ 1.04
CLPB-209ENST00000538039 TNIKQ9UKE5 1360 aa21.55■■□□□ 1.04
CLPB-209ENST00000538039 CSRNP3Q8WYN3 585 aa21.54■■□□□ 1.04
CLPB-209ENST00000538039 UBTFP17480 764 aaKnown RBP21.52■■□□□ 1.04
CLPB-209ENST00000538039 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.04
CLPB-209ENST00000538039 GTF3C3Q9Y5Q9 886 aa21.42■■□□□ 1.02
CLPB-209ENST00000538039 PELP1Q8IZL8 1130 aaKnown RBP21.38■■□□□ 1.01
CLPB-209ENST00000538039 BICRAQ9NZM4 1560 aa21.35■■□□□ 1.01
CLPB-209ENST00000538039 HNRNPUL2Q1KMD3 747 aaKnown RBP21.34■■□□□ 1.01
CLPB-209ENST00000538039 SYNJ1O43426 1573 aa21.34■■□□□ 1.01
CLPB-209ENST00000538039 GOLGA3Q08378 1498 aa21.34■■□□□ 1.01
CLPB-209ENST00000538039 EEA1Q15075 1411 aa21.31■■□□□ 1
CLPB-209ENST00000538039 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
CLPB-209ENST00000538039 RANGAP1P46060 587 aaPredicted RBP21.27■■□□□ 1
CLPB-209ENST00000538039 YTHDC1Q96MU7 727 aaKnown RBP21.23■□□□□ 0.99
CLPB-209ENST00000538039 MIER1Q8N108 512 aa21.2■□□□□ 0.99
CLPB-209ENST00000538039 RAPGEF2Q9Y4G8 1499 aa21.19■□□□□ 0.98
CLPB-209ENST00000538039 CENPBP07199 599 aaPredicted RBP21.19■□□□□ 0.98
CLPB-209ENST00000538039 CLIP1P30622 1438 aa21.19■□□□□ 0.98
CLPB-209ENST00000538039 CEP164Q9UPV0 1460 aa21.16■□□□□ 0.98
CLPB-209ENST00000538039 PEG3Q9GZU2 1588 aa21.16■□□□□ 0.98
CLPB-209ENST00000538039 KIF21BO75037 1637 aa21.14■□□□□ 0.97
CLPB-209ENST00000538039 ATAD2BQ9ULI0 1458 aa21.1■□□□□ 0.97
CLPB-209ENST00000538039 VPS8Q8N3P4 1428 aa21.09■□□□□ 0.97
CLPB-209ENST00000538039 BAZ1BQ9UIG0 1483 aaKnown RBP21■□□□□ 0.95
CLPB-209ENST00000538039 KANK4Q5T7N3 995 aaPredicted RBP20.97■□□□□ 0.95
CLPB-209ENST00000538039 APLP2Q06481 763 aa20.91■□□□□ 0.94
CLPB-209ENST00000538039 TOP2BQ02880 1626 aa20.91■□□□□ 0.94
CLPB-209ENST00000538039 ARAP1Q96P48 1450 aa20.89■□□□□ 0.93
CLPB-209ENST00000538039 DHX57Q6P158 1386 aaKnown RBP20.87■□□□□ 0.93
CLPB-209ENST00000538039 PRXQ9BXM0 1461 aa20.83■□□□□ 0.93
CLPB-209ENST00000538039 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
CLPB-209ENST00000538039 CUX1P39880 1505 aa20.76■□□□□ 0.91
CLPB-209ENST00000538039 ERICH3Q5RHP9 1530 aa20.71■□□□□ 0.91
CLPB-209ENST00000538039 ITGAEP38570 1179 aa20.69■□□□□ 0.9
CLPB-209ENST00000538039 RRBP1Q9P2E9 1410 aaKnown RBP20.65■□□□□ 0.9
CLPB-209ENST00000538039 ARHGAP35Q9NRY4 1499 aa20.65■□□□□ 0.9
CLPB-209ENST00000538039 KCNH8Q96L42 1107 aa20.64■□□□□ 0.9
CLPB-209ENST00000538039 CLSPNQ9HAW4 1339 aa20.61■□□□□ 0.89
CLPB-209ENST00000538039 KIF27Q86VH2 1401 aa20.58■□□□□ 0.88
CLPB-209ENST00000538039 CCNB3Q8WWL7 1395 aa20.57■□□□□ 0.88
CLPB-209ENST00000538039 NCAPD3P42695 1498 aa20.55■□□□□ 0.88
CLPB-209ENST00000538039 SUPT16HQ9Y5B9 1047 aaKnown RBP20.55■□□□□ 0.88
CLPB-209ENST00000538039 CUX2O14529 1486 aa20.54■□□□□ 0.88
CLPB-209ENST00000538039 CFTRP13569 1480 aa20.52■□□□□ 0.87
CLPB-209ENST00000538039 MAPKBP1O60336 1514 aa20.51■□□□□ 0.87
CLPB-209ENST00000538039 RAB3GAP2Q9H2M9 1393 aa20.5■□□□□ 0.87
CLPB-209ENST00000538039 HMGXB3Q12766 1538 aa20.49■□□□□ 0.87
CLPB-209ENST00000538039 IGF1RP08069 1367 aa20.49■□□□□ 0.87
CLPB-209ENST00000538039 SIN3AQ96ST3 1273 aa20.45■□□□□ 0.86
CLPB-209ENST00000538039 PHLDB1Q86UU1 1377 aa20.43■□□□□ 0.86
CLPB-209ENST00000538039 P3H3Q8IVL6 736 aa20.42■□□□□ 0.86
CLPB-209ENST00000538039 TIAM1Q13009 1591 aa20.39■□□□□ 0.85
CLPB-209ENST00000538039 HIRIP3Q9BW71 556 aaPredicted RBP20.38■□□□□ 0.85
CLPB-209ENST00000538039 WDR97A6NE52 1622 aa20.37■□□□□ 0.85
CLPB-209ENST00000538039 CARMIL1Q5VZK9 1371 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms