RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 NISCHQ9Y2I1 1504 aa25.04■■□□□ 1.6
CDCA3-201ENST00000229265 CCDC180Q9P1Z9 1646 aa22.28■■□□□ 1.16
CDCA3-201ENST00000229265 ABCC9O60706 1549 aa22.22■■□□□ 1.15
CDCA3-201ENST00000229265 RB1CC1Q8TDY2 1594 aa21.05■□□□□ 0.96
CDCA3-201ENST00000229265 NACADO15069 1562 aa20.96■□□□□ 0.95
CDCA3-201ENST00000229265 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
CDCA3-201ENST00000229265 UNC13AQ9UPW8 1703 aa20.9■□□□□ 0.94
CDCA3-201ENST00000229265 DNAJC5BQ9UF47 199 aa20.85■□□□□ 0.93
CDCA3-201ENST00000229265 ZCCHC6Q5VYS8 1495 aaKnown RBP20.82■□□□□ 0.92
CDCA3-201ENST00000229265 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.91
CDCA3-201ENST00000229265 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
CDCA3-201ENST00000229265 MYO15BQ96JP2 1530 aa20.71■□□□□ 0.91
CDCA3-201ENST00000229265 DCAF1Q9Y4B6 1507 aa20.58■□□□□ 0.88
CDCA3-201ENST00000229265 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
CDCA3-201ENST00000229265 CC2D2AQ9P2K1 1620 aa20.08■□□□□ 0.8
CDCA3-201ENST00000229265 EIF4G1Q04637 1599 aaKnown RBP20.05■□□□□ 0.8
CDCA3-201ENST00000229265 SHROOM4Q9ULL8 1493 aa20.05■□□□□ 0.8
CDCA3-201ENST00000229265 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
CDCA3-201ENST00000229265 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
CDCA3-201ENST00000229265 ATAD2BQ9ULI0 1458 aa19.46■□□□□ 0.71
CDCA3-201ENST00000229265 MROH2BQ7Z745 1585 aa19.42■□□□□ 0.7
CDCA3-201ENST00000229265 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
CDCA3-201ENST00000229265 BAZ1AQ9NRL2 1556 aaPredicted RBP19.31■□□□□ 0.68
CDCA3-201ENST00000229265 HMGXB3Q12766 1538 aa19.26■□□□□ 0.67
CDCA3-201ENST00000229265 NESP48681 1621 aa19.26■□□□□ 0.67
CDCA3-201ENST00000229265 SMARCA2P51531 1590 aa19.26■□□□□ 0.67
CDCA3-201ENST00000229265 PEG3Q9GZU2 1588 aa19.26■□□□□ 0.67
CDCA3-201ENST00000229265 WIZO95785 1651 aa19.21■□□□□ 0.67
CDCA3-201ENST00000229265 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
CDCA3-201ENST00000229265 RSF1Q96T23 1441 aaPredicted RBP19.03■□□□□ 0.64
CDCA3-201ENST00000229265 KIF21AQ7Z4S6 1674 aa18.97■□□□□ 0.63
CDCA3-201ENST00000229265 ERCC6Q03468 1493 aa18.97■□□□□ 0.63
CDCA3-201ENST00000229265 THOC2Q8NI27 1593 aaKnown RBP18.94■□□□□ 0.62
CDCA3-201ENST00000229265 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.61
CDCA3-201ENST00000229265 CUX2O14529 1486 aa18.85■□□□□ 0.61
CDCA3-201ENST00000229265 TOP2AP11388 1531 aaKnown RBP18.83■□□□□ 0.6
CDCA3-201ENST00000229265 CADPSQ9ULU8 1353 aa18.81■□□□□ 0.6
CDCA3-201ENST00000229265 CCDC88BA6NC98 1476 aa18.69■□□□□ 0.58
CDCA3-201ENST00000229265 CFTRP13569 1480 aa18.69■□□□□ 0.58
CDCA3-201ENST00000229265 PDS5BQ9NTI5 1447 aa18.68■□□□□ 0.58
CDCA3-201ENST00000229265 DNAJC5Q9H3Z4 198 aa18.68■□□□□ 0.58
CDCA3-201ENST00000229265 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
CDCA3-201ENST00000229265 MRC2Q9UBG0 1479 aa18.64■□□□□ 0.57
CDCA3-201ENST00000229265 WDR62O43379 1518 aa18.64■□□□□ 0.57
CDCA3-201ENST00000229265 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
CDCA3-201ENST00000229265 CEP164Q9UPV0 1460 aa18.58■□□□□ 0.56
CDCA3-201ENST00000229265 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
CDCA3-201ENST00000229265 SUPT5HO00267 1087 aaKnown RBP18.48■□□□□ 0.55
CDCA3-201ENST00000229265 ZNF608Q9ULD9 1512 aaPredicted RBP18.37■□□□□ 0.53
CDCA3-201ENST00000229265 TOPBP1Q92547 1522 aa18.36■□□□□ 0.53
CDCA3-201ENST00000229265 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
CDCA3-201ENST00000229265 TARBP1Q13395 1621 aaKnown RBP18.24■□□□□ 0.51
CDCA3-201ENST00000229265 RAD54L2Q9Y4B4 1467 aa18.21■□□□□ 0.51
CDCA3-201ENST00000229265 CUX1P39880 1505 aa18.21■□□□□ 0.51
CDCA3-201ENST00000229265 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
CDCA3-201ENST00000229265 EIF4G3O43432 1585 aaKnown RBP18.19■□□□□ 0.5
CDCA3-201ENST00000229265 IFT140Q96RY7 1462 aa18.18■□□□□ 0.5
CDCA3-201ENST00000229265 AQRO60306 1485 aaKnown RBP eCLIP18.16■□□□□ 0.57e-7■■■■□ 24.1
CDCA3-201ENST00000229265 FGD5Q6ZNL6 1462 aa18.11■□□□□ 0.49
CDCA3-201ENST00000229265 ABCC8Q09428 1581 aa18.07■□□□□ 0.48
CDCA3-201ENST00000229265 TDRD9Q8NDG6 1382 aaKnown RBP18.06■□□□□ 0.48
CDCA3-201ENST00000229265 CHD1O14646 1710 aa18.06■□□□□ 0.48
CDCA3-201ENST00000229265 WDR97A6NE52 1622 aa18.05■□□□□ 0.48
CDCA3-201ENST00000229265 SOGA1O94964 1423 aa18.03■□□□□ 0.48
CDCA3-201ENST00000229265 SYNJ1O43426 1573 aa18■□□□□ 0.47
CDCA3-201ENST00000229265 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
CDCA3-201ENST00000229265 TRIM41Q8WV44 630 aa17.98■□□□□ 0.47
CDCA3-201ENST00000229265 RIMBP3CA6NJZ7 1639 aa17.97■□□□□ 0.47
CDCA3-201ENST00000229265 RIMBP3BA6NNM3 1639 aa17.97■□□□□ 0.47
CDCA3-201ENST00000229265 RIMBP3Q9UFD9 1639 aa17.97■□□□□ 0.47
CDCA3-201ENST00000229265 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
CDCA3-201ENST00000229265 CHIC1Q5VXU3 224 aa17.94■□□□□ 0.46
CDCA3-201ENST00000229265 BIVM-ERCC5R4GMW8 1640 aa17.9■□□□□ 0.46
CDCA3-201ENST00000229265 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
CDCA3-201ENST00000229265 PBRM1Q86U86 1689 aa17.9■□□□□ 0.46
CDCA3-201ENST00000229265 ARHGEF11O15085 1522 aa17.88■□□□□ 0.45
CDCA3-201ENST00000229265 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
CDCA3-201ENST00000229265 ABCA10Q8WWZ4 1543 aa17.86■□□□□ 0.45
CDCA3-201ENST00000229265 WRNQ14191 1432 aaPredicted RBP eCLIP17.83■□□□□ 0.45
CDCA3-201ENST00000229265 FBLN2P98095 1184 aa17.83■□□□□ 0.44
CDCA3-201ENST00000229265 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
CDCA3-201ENST00000229265 GRIN2BQ13224 1484 aa17.82■□□□□ 0.44
CDCA3-201ENST00000229265 GAPVD1Q14C86 1478 aa17.82■□□□□ 0.44
CDCA3-201ENST00000229265 ARAP1Q96P48 1450 aa17.79■□□□□ 0.44
CDCA3-201ENST00000229265 MAGI1Q96QZ7 1491 aaPredicted RBP17.76■□□□□ 0.43
CDCA3-201ENST00000229265 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
CDCA3-201ENST00000229265 ERCC6L2Q5T890 1561 aa17.74■□□□□ 0.43
CDCA3-201ENST00000229265 ADAMTS12P58397 1594 aa17.73■□□□□ 0.43
CDCA3-201ENST00000229265 CEP170Q5SW79 1584 aa17.7■□□□□ 0.42
CDCA3-201ENST00000229265 CYB5RLQ6IPT4 315 aa17.68■□□□□ 0.42
CDCA3-201ENST00000229265 CHMP7Q8WUX9 453 aaPredicted RBP17.67■□□□□ 0.42
CDCA3-201ENST00000229265 GRIN2AQ12879 1464 aa17.64■□□□□ 0.41
CDCA3-201ENST00000229265 NUP160Q12769 1436 aa17.6■□□□□ 0.41
CDCA3-201ENST00000229265 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.41
CDCA3-201ENST00000229265 FHAD1B1AJZ9 1412 aa17.55■□□□□ 0.4
CDCA3-201ENST00000229265 SHROOM2Q13796 1616 aa17.54■□□□□ 0.4
CDCA3-201ENST00000229265 RUSC2Q8N2Y8 1516 aa17.53■□□□□ 0.4
CDCA3-201ENST00000229265 IGF1RP08069 1367 aa17.52■□□□□ 0.39
CDCA3-201ENST00000229265 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
CDCA3-201ENST00000229265 PRG4Q92954 1404 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms