RNA–Protein interactions for RNA: ENST00000304031.7

HS1BP3-201, Transcript of HCLS1 binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS1BP3, Length 2,370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3-201ENST00000304031 NISCHQ9Y2I1 1504 aa31.12■■■□□ 2.57
HS1BP3-201ENST00000304031 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
HS1BP3-201ENST00000304031 SHROOM4Q9ULL8 1493 aa26.41■■□□□ 1.82
HS1BP3-201ENST00000304031 ZCCHC6Q5VYS8 1495 aaKnown RBP26.24■■□□□ 1.79
HS1BP3-201ENST00000304031 DCAF8L2P0C7V8 631 aa26.03■■□□□ 1.76
HS1BP3-201ENST00000304031 SUPT5HO00267 1087 aaKnown RBP25.66■■□□□ 1.7
HS1BP3-201ENST00000304031 DCAF1Q9Y4B6 1507 aa25.43■■□□□ 1.66
HS1BP3-201ENST00000304031 ABCC9O60706 1549 aa25.12■■□□□ 1.61
HS1BP3-201ENST00000304031 SCRIBQ14160 1630 aa25.02■■□□□ 1.6
HS1BP3-201ENST00000304031 MYO15BQ96JP2 1530 aa24.8■■□□□ 1.56
HS1BP3-201ENST00000304031 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
HS1BP3-201ENST00000304031 NACADO15069 1562 aa24.66■■□□□ 1.54
HS1BP3-201ENST00000304031 RSF1Q96T23 1441 aaPredicted RBP24.49■■□□□ 1.51
HS1BP3-201ENST00000304031 CECR2Q9BXF3 1484 aa24.39■■□□□ 1.5
HS1BP3-201ENST00000304031 RB1CC1Q8TDY2 1594 aa24.38■■□□□ 1.49
HS1BP3-201ENST00000304031 MROH2BQ7Z745 1585 aa24.24■■□□□ 1.47
HS1BP3-201ENST00000304031 UNC13AQ9UPW8 1703 aa24.19■■□□□ 1.46
HS1BP3-201ENST00000304031 WIZO95785 1651 aa24.13■■□□□ 1.45
HS1BP3-201ENST00000304031 LOC105371045A0A1W2PR82 267 aa24.03■■□□□ 1.44
HS1BP3-201ENST00000304031 PABPN1Q86U42 306 aaKnown RBP eCLIP23.96■■□□□ 1.43
HS1BP3-201ENST00000304031 BAZ1AQ9NRL2 1556 aaPredicted RBP23.9■■□□□ 1.42
HS1BP3-201ENST00000304031 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
HS1BP3-201ENST00000304031 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
HS1BP3-201ENST00000304031 SMARCA4P51532 1647 aa23.82■■□□□ 1.4
HS1BP3-201ENST00000304031 FAM9AQ8IZU1 332 aaPredicted RBP23.76■■□□□ 1.39
HS1BP3-201ENST00000304031 EHMT2Q96KQ7 1210 aa23.66■■□□□ 1.38
HS1BP3-201ENST00000304031 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.37
HS1BP3-201ENST00000304031 EIF4G1Q04637 1599 aaKnown RBP23.58■■□□□ 1.36
HS1BP3-201ENST00000304031 CCDC88BA6NC98 1476 aa23.57■■□□□ 1.36
HS1BP3-201ENST00000304031 PCGF6Q9BYE7 350 aa23.56■■□□□ 1.36
HS1BP3-201ENST00000304031 SMARCA2P51531 1590 aa23.55■■□□□ 1.36
HS1BP3-201ENST00000304031 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
HS1BP3-201ENST00000304031 PEG3Q9GZU2 1588 aa23.3■■□□□ 1.32
HS1BP3-201ENST00000304031 ATAD2BQ9ULI0 1458 aa23.27■■□□□ 1.32
HS1BP3-201ENST00000304031 BAZ1BQ9UIG0 1483 aaKnown RBP23.19■■□□□ 1.3
HS1BP3-201ENST00000304031 HRCP23327 699 aa23.19■■□□□ 1.3
HS1BP3-201ENST00000304031 SOGA1O94964 1423 aa23.13■■□□□ 1.29
HS1BP3-201ENST00000304031 TRIM26Q12899 539 aaPredicted RBP23.08■■□□□ 1.29
HS1BP3-201ENST00000304031 RUSC2Q8N2Y8 1516 aa23.07■■□□□ 1.28
HS1BP3-201ENST00000304031 PPARGC1BQ86YN6 1023 aaKnown RBP23.05■■□□□ 1.28
HS1BP3-201ENST00000304031 WRNQ14191 1432 aaPredicted RBP eCLIP23■■□□□ 1.27
HS1BP3-201ENST00000304031 SYNJ1O43426 1573 aa22.99■■□□□ 1.27
HS1BP3-201ENST00000304031 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
HS1BP3-201ENST00000304031 NCAPD3P42695 1498 aa22.83■■□□□ 1.25
HS1BP3-201ENST00000304031 HMGXB3Q12766 1538 aa22.81■■□□□ 1.24
HS1BP3-201ENST00000304031 UBTFP17480 764 aaKnown RBP22.78■■□□□ 1.24
HS1BP3-201ENST00000304031 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
HS1BP3-201ENST00000304031 CEP162Q5TB80 1403 aa22.78■■□□□ 1.24
HS1BP3-201ENST00000304031 EEA1Q15075 1411 aa22.73■■□□□ 1.23
HS1BP3-201ENST00000304031 TNIKQ9UKE5 1360 aa22.69■■□□□ 1.22
HS1BP3-201ENST00000304031 TOP2BQ02880 1626 aa22.67■■□□□ 1.22
HS1BP3-201ENST00000304031 GOLGA3Q08378 1498 aa22.66■■□□□ 1.22
HS1BP3-201ENST00000304031 BIVM-ERCC5R4GMW8 1640 aa22.59■■□□□ 1.21
HS1BP3-201ENST00000304031 CC2D2AQ9P2K1 1620 aa22.59■■□□□ 1.21
HS1BP3-201ENST00000304031 RANGAP1P46060 587 aaPredicted RBP22.58■■□□□ 1.21
HS1BP3-201ENST00000304031 CUX1P39880 1505 aa22.58■■□□□ 1.21
HS1BP3-201ENST00000304031 CFTRP13569 1480 aa22.57■■□□□ 1.2
HS1BP3-201ENST00000304031 RAPGEF2Q9Y4G8 1499 aa22.57■■□□□ 1.2
HS1BP3-201ENST00000304031 CEP164Q9UPV0 1460 aa22.56■■□□□ 1.2
HS1BP3-201ENST00000304031 KIF21BO75037 1637 aa22.55■■□□□ 1.2
HS1BP3-201ENST00000304031 PRDM2Q13029 1718 aa22.43■■□□□ 1.18
HS1BP3-201ENST00000304031 CLIP1P30622 1438 aa22.42■■□□□ 1.18
HS1BP3-201ENST00000304031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.4■■□□□ 1.18
HS1BP3-201ENST00000304031 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.17
HS1BP3-201ENST00000304031 PRXQ9BXM0 1461 aa22.31■■□□□ 1.16
HS1BP3-201ENST00000304031 NESP48681 1621 aa22.29■■□□□ 1.16
HS1BP3-201ENST00000304031 KIF27Q86VH2 1401 aa22.29■■□□□ 1.16
HS1BP3-201ENST00000304031 DNAJC5BQ9UF47 199 aa22.28■■□□□ 1.16
HS1BP3-201ENST00000304031 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
HS1BP3-201ENST00000304031 VPS8Q8N3P4 1428 aa22.24■■□□□ 1.15
HS1BP3-201ENST00000304031 ERICH3Q5RHP9 1530 aa22.23■■□□□ 1.15
HS1BP3-201ENST00000304031 CUX2O14529 1486 aa22.23■■□□□ 1.15
HS1BP3-201ENST00000304031 FGD5Q6ZNL6 1462 aa22.23■■□□□ 1.15
HS1BP3-201ENST00000304031 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
HS1BP3-201ENST00000304031 CCER1Q8TC90 406 aaPredicted RBP22.21■■□□□ 1.15
HS1BP3-201ENST00000304031 ARAP1Q96P48 1450 aa22.14■■□□□ 1.14
HS1BP3-201ENST00000304031 IGF1RP08069 1367 aa22.12■■□□□ 1.13
HS1BP3-201ENST00000304031 RAD54L2Q9Y4B4 1467 aa22.1■■□□□ 1.13
HS1BP3-201ENST00000304031 HNRNPUL2Q1KMD3 747 aaKnown RBP22.1■■□□□ 1.13
HS1BP3-201ENST00000304031 APLP2Q06481 763 aa22.09■■□□□ 1.13
HS1BP3-201ENST00000304031 TOPBP1Q92547 1522 aa22.04■■□□□ 1.12
HS1BP3-201ENST00000304031 DNMBPQ6XZF7 1577 aa22.02■■□□□ 1.12
HS1BP3-201ENST00000304031 KANK4Q5T7N3 995 aaPredicted RBP22.02■■□□□ 1.11
HS1BP3-201ENST00000304031 POLA1P09884 1462 aaPredicted RBP22.01■■□□□ 1.11
HS1BP3-201ENST00000304031 ARHGAP35Q9NRY4 1499 aa22.01■■□□□ 1.11
HS1BP3-201ENST00000304031 CARMIL1Q5VZK9 1371 aa22.01■■□□□ 1.11
HS1BP3-201ENST00000304031 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
HS1BP3-201ENST00000304031 LAMC3Q9Y6N6 1575 aa21.93■■□□□ 1.1
HS1BP3-201ENST00000304031 KIF21AQ7Z4S6 1674 aa21.91■■□□□ 1.1
HS1BP3-201ENST00000304031 ABCA10Q8WWZ4 1543 aa21.9■■□□□ 1.1
HS1BP3-201ENST00000304031 P3H3Q8IVL6 736 aa21.89■■□□□ 1.1
HS1BP3-201ENST00000304031 TDRD9Q8NDG6 1382 aaKnown RBP21.84■■□□□ 1.09
HS1BP3-201ENST00000304031 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
HS1BP3-201ENST00000304031 PDS5BQ9NTI5 1447 aa21.78■■□□□ 1.08
HS1BP3-201ENST00000304031 FHOD3Q2V2M9 1422 aa21.74■■□□□ 1.07
HS1BP3-201ENST00000304031 ATP1B4Q9UN42 357 aaPredicted RBP21.73■■□□□ 1.07
HS1BP3-201ENST00000304031 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
HS1BP3-201ENST00000304031 CUL7Q14999 1698 aa21.71■■□□□ 1.07
HS1BP3-201ENST00000304031 ITGAEP38570 1179 aa21.7■■□□□ 1.07
HS1BP3-201ENST00000304031 PCF11O94913 1555 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms