RNA–Protein interactions for RNA: ENST00000539093.2

PXMP2-204, Transcript of peroxisomal membrane protein 2, humanhuman

TSL 3

Gene PXMP2, Length 516 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP2-204ENST00000539093 NISCHQ9Y2I1 1504 aa39.59■■■■□ 3.93
PXMP2-204ENST00000539093 ABCC9O60706 1549 aa36.24■■■■□ 3.39
PXMP2-204ENST00000539093 CCDC180Q9P1Z9 1646 aa35.79■■■■□ 3.32
PXMP2-204ENST00000539093 RB1CC1Q8TDY2 1594 aa34.34■■■■□ 3.09
PXMP2-204ENST00000539093 DNAJC5BQ9UF47 199 aa34.28■■■■□ 3.08
PXMP2-204ENST00000539093 NACADO15069 1562 aa33.96■■■■□ 3.03
PXMP2-204ENST00000539093 DCAF8L2P0C7V8 631 aa33.73■■■□□ 2.99
PXMP2-204ENST00000539093 PABPN1Q86U42 306 aaKnown RBP eCLIP33.64■■■□□ 2.98
PXMP2-204ENST00000539093 UNC13AQ9UPW8 1703 aa33.44■■■□□ 2.94
PXMP2-204ENST00000539093 MYO15BQ96JP2 1530 aa33.31■■■□□ 2.92
PXMP2-204ENST00000539093 BICRAQ9NZM4 1560 aa33.21■■■□□ 2.91
PXMP2-204ENST00000539093 SHROOM4Q9ULL8 1493 aa32.86■■■□□ 2.85
PXMP2-204ENST00000539093 CECR2Q9BXF3 1484 aa32.72■■■□□ 2.83
PXMP2-204ENST00000539093 ZCCHC6Q5VYS8 1495 aaKnown RBP32.7■■■□□ 2.83
PXMP2-204ENST00000539093 CC2D2AQ9P2K1 1620 aa32.69■■■□□ 2.82
PXMP2-204ENST00000539093 DCAF1Q9Y4B6 1507 aa32.69■■■□□ 2.82
PXMP2-204ENST00000539093 SCRIBQ14160 1630 aa32.55■■■□□ 2.8
PXMP2-204ENST00000539093 EIF4G1Q04637 1599 aaKnown RBP32.51■■■□□ 2.79
PXMP2-204ENST00000539093 DNAJC5Q9H3Z4 198 aa31.96■■■□□ 2.71
PXMP2-204ENST00000539093 CUX2O14529 1486 aa31.48■■■□□ 2.63
PXMP2-204ENST00000539093 ERCC6Q03468 1493 aa31.42■■■□□ 2.62
PXMP2-204ENST00000539093 NCAPD3P42695 1498 aa31.32■■■□□ 2.6
PXMP2-204ENST00000539093 ATAD2BQ9ULI0 1458 aa31.14■■■□□ 2.57
PXMP2-204ENST00000539093 SMARCA2P51531 1590 aa31.1■■■□□ 2.57
PXMP2-204ENST00000539093 HMGXB3Q12766 1538 aa31.06■■■□□ 2.56
PXMP2-204ENST00000539093 SMARCA4P51532 1647 aa30.99■■■□□ 2.55
PXMP2-204ENST00000539093 NESP48681 1621 aa30.93■■■□□ 2.54
PXMP2-204ENST00000539093 BAZ1BQ9UIG0 1483 aaKnown RBP30.88■■■□□ 2.53
PXMP2-204ENST00000539093 BAZ1AQ9NRL2 1556 aaPredicted RBP30.83■■■□□ 2.53
PXMP2-204ENST00000539093 THOC2Q8NI27 1593 aaKnown RBP30.74■■■□□ 2.51
PXMP2-204ENST00000539093 LAMC3Q9Y6N6 1575 aa30.74■■■□□ 2.51
PXMP2-204ENST00000539093 PEG3Q9GZU2 1588 aa30.68■■■□□ 2.5
PXMP2-204ENST00000539093 PDS5BQ9NTI5 1447 aa30.61■■■□□ 2.49
PXMP2-204ENST00000539093 KIF21AQ7Z4S6 1674 aa30.55■■■□□ 2.48
PXMP2-204ENST00000539093 MROH2BQ7Z745 1585 aa30.46■■■□□ 2.47
PXMP2-204ENST00000539093 TRIM41Q8WV44 630 aa30.43■■■□□ 2.46
PXMP2-204ENST00000539093 CADPSQ9ULU8 1353 aa30.36■■■□□ 2.45
PXMP2-204ENST00000539093 MRC2Q9UBG0 1479 aa30.33■■■□□ 2.45
PXMP2-204ENST00000539093 WDR62O43379 1518 aa30.24■■■□□ 2.43
PXMP2-204ENST00000539093 CEP164Q9UPV0 1460 aa30.14■■■□□ 2.42
PXMP2-204ENST00000539093 WIZO95785 1651 aa30.08■■■□□ 2.41
PXMP2-204ENST00000539093 FANCD2Q9BXW9 1451 aa30.03■■■□□ 2.4
PXMP2-204ENST00000539093 OSCARQ8IYS5 282 aa29.98■■■□□ 2.39
PXMP2-204ENST00000539093 CFTRP13569 1480 aa29.89■■■□□ 2.38
PXMP2-204ENST00000539093 URB2Q14146 1524 aaKnown RBP29.75■■■□□ 2.35
PXMP2-204ENST00000539093 TOP2AP11388 1531 aaKnown RBP29.72■■■□□ 2.35
PXMP2-204ENST00000539093 RSF1Q96T23 1441 aaPredicted RBP29.66■■■□□ 2.34
PXMP2-204ENST00000539093 PRDM2Q13029 1718 aa29.59■■■□□ 2.33
PXMP2-204ENST00000539093 RIMBP3CA6NJZ7 1639 aa29.57■■■□□ 2.32
PXMP2-204ENST00000539093 RIMBP3BA6NNM3 1639 aa29.57■■■□□ 2.32
PXMP2-204ENST00000539093 RIMBP3Q9UFD9 1639 aa29.57■■■□□ 2.32
PXMP2-204ENST00000539093 IFT140Q96RY7 1462 aa29.55■■■□□ 2.32
PXMP2-204ENST00000539093 ZNF608Q9ULD9 1512 aaPredicted RBP29.45■■■□□ 2.31
PXMP2-204ENST00000539093 ARHGEF11O15085 1522 aa29.45■■■□□ 2.3
PXMP2-204ENST00000539093 TOPBP1Q92547 1522 aa29.38■■■□□ 2.29
PXMP2-204ENST00000539093 ABCC8Q09428 1581 aa29.38■■■□□ 2.29
PXMP2-204ENST00000539093 CCDC88BA6NC98 1476 aa29.35■■■□□ 2.29
PXMP2-204ENST00000539093 EIF4G3O43432 1585 aaKnown RBP29.33■■■□□ 2.29
PXMP2-204ENST00000539093 CYB5RLQ6IPT4 315 aa29.29■■■□□ 2.28
PXMP2-204ENST00000539093 DNMBPQ6XZF7 1577 aa29.26■■■□□ 2.27
PXMP2-204ENST00000539093 TRHP20396 242 aaPredicted RBP29.2■■■□□ 2.26
PXMP2-204ENST00000539093 CHD1O14646 1710 aa29.19■■■□□ 2.26
PXMP2-204ENST00000539093 FBLN2P98095 1184 aa29.17■■■□□ 2.26
PXMP2-204ENST00000539093 AQRO60306 1485 aaKnown RBP eCLIP29.16■■■□□ 2.26
PXMP2-204ENST00000539093 TARBP1Q13395 1621 aaKnown RBP29.12■■■□□ 2.25
PXMP2-204ENST00000539093 ARAP1Q96P48 1450 aa29.09■■■□□ 2.25
PXMP2-204ENST00000539093 POLA1P09884 1462 aaPredicted RBP29.04■■■□□ 2.24
PXMP2-204ENST00000539093 SOGA1O94964 1423 aa28.94■■■□□ 2.22
PXMP2-204ENST00000539093 RAD54L2Q9Y4B4 1467 aa28.91■■■□□ 2.22
PXMP2-204ENST00000539093 TDRD9Q8NDG6 1382 aaKnown RBP28.91■■■□□ 2.22
PXMP2-204ENST00000539093 WDR97A6NE52 1622 aa28.9■■■□□ 2.22
PXMP2-204ENST00000539093 SNAPC4Q5SXM2 1469 aa28.88■■■□□ 2.21
PXMP2-204ENST00000539093 CHMP7Q8WUX9 453 aaPredicted RBP28.87■■■□□ 2.21
PXMP2-204ENST00000539093 SYNJ1O43426 1573 aa28.86■■■□□ 2.21
PXMP2-204ENST00000539093 MAGI1Q96QZ7 1491 aaPredicted RBP28.82■■■□□ 2.2
PXMP2-204ENST00000539093 CLASP1Q7Z460 1538 aa28.82■■■□□ 2.2
PXMP2-204ENST00000539093 FGD5Q6ZNL6 1462 aa28.8■■■□□ 2.2
PXMP2-204ENST00000539093 AEBP2Q6ZN18 517 aaPredicted RBP28.77■■■□□ 2.2
PXMP2-204ENST00000539093 GRIN2BQ13224 1484 aa28.76■■■□□ 2.19
PXMP2-204ENST00000539093 SYNJ2O15056 1496 aa28.72■■■□□ 2.19
PXMP2-204ENST00000539093 CUX1P39880 1505 aa28.66■■■□□ 2.18
PXMP2-204ENST00000539093 GAPVD1Q14C86 1478 aa28.59■■■□□ 2.17
PXMP2-204ENST00000539093 PBRM1Q86U86 1689 aa28.59■■■□□ 2.17
PXMP2-204ENST00000539093 ABCA10Q8WWZ4 1543 aa28.45■■■□□ 2.15
PXMP2-204ENST00000539093 ABCA5Q8WWZ7 1642 aa28.43■■■□□ 2.14
PXMP2-204ENST00000539093 GRIN2AQ12879 1464 aa28.37■■■□□ 2.13
PXMP2-204ENST00000539093 WRNQ14191 1432 aaPredicted RBP eCLIP28.3■■■□□ 2.12
PXMP2-204ENST00000539093 ERCC6L2Q5T890 1561 aa28.28■■■□□ 2.12
PXMP2-204ENST00000539093 ADAMTS12P58397 1594 aa28.28■■■□□ 2.12
PXMP2-204ENST00000539093 CEP170Q5SW79 1584 aa28.28■■■□□ 2.12
PXMP2-204ENST00000539093 NUP160Q12769 1436 aa28.26■■■□□ 2.12
PXMP2-204ENST00000539093 FHAD1B1AJZ9 1412 aa28.21■■■□□ 2.11
PXMP2-204ENST00000539093 SHROOM2Q13796 1616 aa28.18■■■□□ 2.1
PXMP2-204ENST00000539093 ERICH3Q5RHP9 1530 aa28.12■■■□□ 2.09
PXMP2-204ENST00000539093 TOP2BQ02880 1626 aa28.11■■■□□ 2.09
PXMP2-204ENST00000539093 BIVM-ERCC5R4GMW8 1640 aa28.1■■■□□ 2.09
PXMP2-204ENST00000539093 SUPT5HO00267 1087 aaKnown RBP28.07■■■□□ 2.08
PXMP2-204ENST00000539093 PRG4Q92954 1404 aaPredicted RBP28.07■■■□□ 2.08
PXMP2-204ENST00000539093 KIF13AQ9H1H9 1805 aa28.06■■■□□ 2.08
PXMP2-204ENST00000539093 NPM1P06748 294 aaKnown RBP eCLIP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms