RNA–Protein interactions for RNA: ENST00000543042.5

CLPB-212, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-212ENST00000543042 NISCHQ9Y2I1 1504 aa39.63■■■■□ 3.93
CLPB-212ENST00000543042 CCDC180Q9P1Z9 1646 aa34.11■■■■□ 3.05
CLPB-212ENST00000543042 ZCCHC6Q5VYS8 1495 aaKnown RBP33.33■■■□□ 2.93
CLPB-212ENST00000543042 DCAF8L2P0C7V8 631 aa33.07■■■□□ 2.88
CLPB-212ENST00000543042 SHROOM4Q9ULL8 1493 aa33.06■■■□□ 2.88
CLPB-212ENST00000543042 DCAF1Q9Y4B6 1507 aa32.54■■■□□ 2.8
CLPB-212ENST00000543042 ABCC9O60706 1549 aa32.36■■■□□ 2.77
CLPB-212ENST00000543042 SUPT5HO00267 1087 aaKnown RBP32■■■□□ 2.71
CLPB-212ENST00000543042 MYO15BQ96JP2 1530 aa31.95■■■□□ 2.71
CLPB-212ENST00000543042 SCRIBQ14160 1630 aa31.79■■■□□ 2.68
CLPB-212ENST00000543042 NACADO15069 1562 aa31.77■■■□□ 2.68
CLPB-212ENST00000543042 RB1CC1Q8TDY2 1594 aa31.43■■■□□ 2.62
CLPB-212ENST00000543042 RSF1Q96T23 1441 aaPredicted RBP31.01■■■□□ 2.55
CLPB-212ENST00000543042 CECR2Q9BXF3 1484 aa30.97■■■□□ 2.55
CLPB-212ENST00000543042 UNC13AQ9UPW8 1703 aa30.92■■■□□ 2.54
CLPB-212ENST00000543042 PABPN1Q86U42 306 aaKnown RBP eCLIP30.77■■■□□ 2.52
CLPB-212ENST00000543042 MROH2BQ7Z745 1585 aa30.76■■■□□ 2.51
CLPB-212ENST00000543042 CHIC1Q5VXU3 224 aa30.71■■■□□ 2.51
CLPB-212ENST00000543042 BICRAQ9NZM4 1560 aa30.63■■■□□ 2.49
CLPB-212ENST00000543042 WIZO95785 1651 aa30.53■■■□□ 2.48
CLPB-212ENST00000543042 BAZ1AQ9NRL2 1556 aaPredicted RBP30.49■■■□□ 2.47
CLPB-212ENST00000543042 SMARCA4P51532 1647 aa30.36■■■□□ 2.45
CLPB-212ENST00000543042 TOP2AP11388 1531 aaKnown RBP30.04■■■□□ 2.4
CLPB-212ENST00000543042 CCDC88BA6NC98 1476 aa29.92■■■□□ 2.38
CLPB-212ENST00000543042 TRIM41Q8WV44 630 aa29.89■■■□□ 2.38
CLPB-212ENST00000543042 SMARCA2P51531 1590 aa29.86■■■□□ 2.37
CLPB-212ENST00000543042 PEG3Q9GZU2 1588 aa29.84■■■□□ 2.37
CLPB-212ENST00000543042 ATAD2BQ9ULI0 1458 aa29.82■■■□□ 2.36
CLPB-212ENST00000543042 LOC105371045A0A1W2PR82 267 aa29.75■■■□□ 2.35
CLPB-212ENST00000543042 EIF4G1Q04637 1599 aaKnown RBP29.72■■■□□ 2.35
CLPB-212ENST00000543042 BAZ1BQ9UIG0 1483 aaKnown RBP29.66■■■□□ 2.34
CLPB-212ENST00000543042 FAM9AQ8IZU1 332 aaPredicted RBP29.59■■■□□ 2.33
CLPB-212ENST00000543042 ABCC8Q09428 1581 aa29.51■■■□□ 2.31
CLPB-212ENST00000543042 NCAPD3P42695 1498 aa29.42■■■□□ 2.3
CLPB-212ENST00000543042 EHMT2Q96KQ7 1210 aa29.34■■■□□ 2.29
CLPB-212ENST00000543042 HMGXB3Q12766 1538 aa29.31■■■□□ 2.28
CLPB-212ENST00000543042 CC2D2AQ9P2K1 1620 aa29.15■■■□□ 2.26
CLPB-212ENST00000543042 WRNQ14191 1432 aaPredicted RBP eCLIP29.13■■■□□ 2.25
CLPB-212ENST00000543042 SOGA1O94964 1423 aa29.07■■■□□ 2.24
CLPB-212ENST00000543042 SYNJ1O43426 1573 aa29.03■■■□□ 2.24
CLPB-212ENST00000543042 RUSC2Q8N2Y8 1516 aa28.99■■■□□ 2.23
CLPB-212ENST00000543042 CFTRP13569 1480 aa28.91■■■□□ 2.22
CLPB-212ENST00000543042 CSRNP3Q8WYN3 585 aa28.82■■■□□ 2.2
CLPB-212ENST00000543042 CADPSQ9ULU8 1353 aa28.78■■■□□ 2.2
CLPB-212ENST00000543042 PCGF6Q9BYE7 350 aa28.76■■■□□ 2.2
CLPB-212ENST00000543042 TOP2BQ02880 1626 aa28.75■■■□□ 2.19
CLPB-212ENST00000543042 EEA1Q15075 1411 aa28.73■■■□□ 2.19
CLPB-212ENST00000543042 DNAJC5BQ9UF47 199 aa28.73■■■□□ 2.19
CLPB-212ENST00000543042 CUX1P39880 1505 aa28.69■■■□□ 2.18
CLPB-212ENST00000543042 BIVM-ERCC5R4GMW8 1640 aa28.66■■■□□ 2.18
CLPB-212ENST00000543042 UBTFP17480 764 aaKnown RBP28.6■■■□□ 2.17
CLPB-212ENST00000543042 PRDM2Q13029 1718 aa28.57■■■□□ 2.16
CLPB-212ENST00000543042 NESP48681 1621 aa28.57■■■□□ 2.16
CLPB-212ENST00000543042 TNIKQ9UKE5 1360 aa28.51■■■□□ 2.16
CLPB-212ENST00000543042 GOLGA3Q08378 1498 aa28.49■■■□□ 2.15
CLPB-212ENST00000543042 CEP162Q5TB80 1403 aa28.47■■■□□ 2.15
CLPB-212ENST00000543042 FANCD2Q9BXW9 1451 aa28.47■■■□□ 2.15
CLPB-212ENST00000543042 PPARGC1BQ86YN6 1023 aaKnown RBP28.45■■■□□ 2.14
CLPB-212ENST00000543042 TRIM26Q12899 539 aaPredicted RBP28.44■■■□□ 2.14
CLPB-212ENST00000543042 CEP164Q9UPV0 1460 aa28.43■■■□□ 2.14
CLPB-212ENST00000543042 RAPGEF2Q9Y4G8 1499 aa28.4■■■□□ 2.14
CLPB-212ENST00000543042 KIF21BO75037 1637 aa28.39■■■□□ 2.14
CLPB-212ENST00000543042 KIF27Q86VH2 1401 aa28.31■■■□□ 2.12
CLPB-212ENST00000543042 FGD5Q6ZNL6 1462 aa28.31■■■□□ 2.12
CLPB-212ENST00000543042 LAMC3Q9Y6N6 1575 aa28.27■■■□□ 2.12
CLPB-212ENST00000543042 RANGAP1P46060 587 aaPredicted RBP28.26■■■□□ 2.11
CLPB-212ENST00000543042 CUX2O14529 1486 aa28.24■■■□□ 2.11
CLPB-212ENST00000543042 PRXQ9BXM0 1461 aa28.24■■■□□ 2.11
CLPB-212ENST00000543042 TOPBP1Q92547 1522 aa28.19■■■□□ 2.1
CLPB-212ENST00000543042 DNMBPQ6XZF7 1577 aa28.17■■■□□ 2.1
CLPB-212ENST00000543042 RAD54L2Q9Y4B4 1467 aa28.16■■■□□ 2.1
CLPB-212ENST00000543042 CLIP1P30622 1438 aa28.14■■■□□ 2.1
CLPB-212ENST00000543042 IGF1RP08069 1367 aa28.14■■■□□ 2.1
CLPB-212ENST00000543042 TTBK1Q5TCY1 1321 aaPredicted RBP28.13■■■□□ 2.09
CLPB-212ENST00000543042 PDS5BQ9NTI5 1447 aa28.13■■■□□ 2.09
CLPB-212ENST00000543042 URB2Q14146 1524 aaKnown RBP28.12■■■□□ 2.09
CLPB-212ENST00000543042 POLA1P09884 1462 aaPredicted RBP28.12■■■□□ 2.09
CLPB-212ENST00000543042 HRCP23327 699 aa28.11■■■□□ 2.09
CLPB-212ENST00000543042 ERICH3Q5RHP9 1530 aa28.11■■■□□ 2.09
CLPB-212ENST00000543042 KIF21AQ7Z4S6 1674 aa28.05■■■□□ 2.08
CLPB-212ENST00000543042 CARMIL1Q5VZK9 1371 aa27.97■■■□□ 2.07
CLPB-212ENST00000543042 ABCA10Q8WWZ4 1543 aa27.97■■■□□ 2.07
CLPB-212ENST00000543042 VPS8Q8N3P4 1428 aa27.89■■■□□ 2.06
CLPB-212ENST00000543042 TDRD9Q8NDG6 1382 aaKnown RBP27.88■■■□□ 2.05
CLPB-212ENST00000543042 ARAP1Q96P48 1450 aa27.82■■■□□ 2.04
CLPB-212ENST00000543042 WDR97A6NE52 1622 aa27.78■■■□□ 2.04
CLPB-212ENST00000543042 ARHGAP35Q9NRY4 1499 aa27.74■■■□□ 2.03
CLPB-212ENST00000543042 MRC2Q9UBG0 1479 aa27.74■■■□□ 2.03
CLPB-212ENST00000543042 GAPVD1Q14C86 1478 aa27.71■■■□□ 2.03
CLPB-212ENST00000543042 APLP2Q06481 763 aa27.71■■■□□ 2.03
CLPB-212ENST00000543042 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.02
CLPB-212ENST00000543042 ABCA5Q8WWZ7 1642 aa27.69■■■□□ 2.02
CLPB-212ENST00000543042 CUL7Q14999 1698 aa27.62■■■□□ 2.01
CLPB-212ENST00000543042 AQRO60306 1485 aaKnown RBP eCLIP27.62■■■□□ 2.011e-6■■■■■ 33.8
CLPB-212ENST00000543042 P3H3Q8IVL6 736 aa27.61■■■□□ 2.01
CLPB-212ENST00000543042 ERCC6Q03468 1493 aa27.59■■■□□ 2.01
CLPB-212ENST00000543042 KANK4Q5T7N3 995 aaPredicted RBP27.58■■■□□ 2.01
CLPB-212ENST00000543042 WDR62O43379 1518 aa27.55■■■□□ 2
CLPB-212ENST00000543042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.52■■■□□ 2
CLPB-212ENST00000543042 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms