RNA–Protein interactions for RNA: ENST00000540534.5

STMN3-202, Transcript of stathmin 3, humanhuman

TSL 2 BASIC

Gene STMN3, Length 2,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STMN3-202ENST00000540534 NISCHQ9Y2I1 1504 aa41.23■■■■■ 4.19
STMN3-202ENST00000540534 CCDC180Q9P1Z9 1646 aa35.85■■■■□ 3.33
STMN3-202ENST00000540534 ZCCHC6Q5VYS8 1495 aaKnown RBP34.62■■■■□ 3.13
STMN3-202ENST00000540534 DCAF8L2P0C7V8 631 aa34.19■■■■□ 3.06
STMN3-202ENST00000540534 ABCC9O60706 1549 aa34.11■■■■□ 3.05
STMN3-202ENST00000540534 DCAF1Q9Y4B6 1507 aa33.99■■■■□ 3.03
STMN3-202ENST00000540534 SHROOM4Q9ULL8 1493 aa33.79■■■■□ 3
STMN3-202ENST00000540534 MYO15BQ96JP2 1530 aa33.56■■■□□ 2.96
STMN3-202ENST00000540534 NACADO15069 1562 aa33.42■■■□□ 2.94
STMN3-202ENST00000540534 RB1CC1Q8TDY2 1594 aa33.14■■■□□ 2.9
STMN3-202ENST00000540534 SCRIBQ14160 1630 aa33.12■■■□□ 2.89
STMN3-202ENST00000540534 UNC13AQ9UPW8 1703 aa32.58■■■□□ 2.81
STMN3-202ENST00000540534 SUPT5HO00267 1087 aaKnown RBP32.47■■■□□ 2.79
STMN3-202ENST00000540534 BICRAQ9NZM4 1560 aa32.26■■■□□ 2.75
STMN3-202ENST00000540534 PABPN1Q86U42 306 aaKnown RBP eCLIP32.23■■■□□ 2.756e-6■■■■□ 21.1
STMN3-202ENST00000540534 CECR2Q9BXF3 1484 aa32.15■■■□□ 2.74
STMN3-202ENST00000540534 RSF1Q96T23 1441 aaPredicted RBP32.03■■■□□ 2.72
STMN3-202ENST00000540534 MROH2BQ7Z745 1585 aa31.92■■■□□ 2.7
STMN3-202ENST00000540534 BAZ1AQ9NRL2 1556 aaPredicted RBP31.79■■■□□ 2.68
STMN3-202ENST00000540534 SMARCA4P51532 1647 aa31.69■■■□□ 2.66
STMN3-202ENST00000540534 WIZO95785 1651 aa31.66■■■□□ 2.66
STMN3-202ENST00000540534 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.59
STMN3-202ENST00000540534 EIF4G1Q04637 1599 aaKnown RBP31.26■■■□□ 2.59
STMN3-202ENST00000540534 TOP2AP11388 1531 aaKnown RBP31.24■■■□□ 2.59
STMN3-202ENST00000540534 ATAD2BQ9ULI0 1458 aa31.2■■■□□ 2.58
STMN3-202ENST00000540534 SMARCA2P51531 1590 aa31.09■■■□□ 2.57
STMN3-202ENST00000540534 CHIC1Q5VXU3 224 aa31.04■■■□□ 2.56
STMN3-202ENST00000540534 CCDC88BA6NC98 1476 aa30.99■■■□□ 2.55
STMN3-202ENST00000540534 BAZ1BQ9UIG0 1483 aaKnown RBP30.99■■■□□ 2.55
STMN3-202ENST00000540534 NCAPD3P42695 1498 aa30.89■■■□□ 2.54
STMN3-202ENST00000540534 CC2D2AQ9P2K1 1620 aa30.82■■■□□ 2.52
STMN3-202ENST00000540534 HMGXB3Q12766 1538 aa30.81■■■□□ 2.52
STMN3-202ENST00000540534 HRCP23327 699 aa30.65■■■□□ 2.5
STMN3-202ENST00000540534 TRIM41Q8WV44 630 aa30.45■■■□□ 2.47
STMN3-202ENST00000540534 ABCC8Q09428 1581 aa30.39■■■□□ 2.45
STMN3-202ENST00000540534 PCGF6Q9BYE7 350 aa30.27■■■□□ 2.44
STMN3-202ENST00000540534 DNAJC5BQ9UF47 199 aa30.27■■■□□ 2.44
STMN3-202ENST00000540534 CFTRP13569 1480 aa30.22■■■□□ 2.43
STMN3-202ENST00000540534 CADPSQ9ULU8 1353 aa30.12■■■□□ 2.41
STMN3-202ENST00000540534 WRNQ14191 1432 aaPredicted RBP eCLIP30.11■■■□□ 2.41
STMN3-202ENST00000540534 SYNJ1O43426 1573 aa30.03■■■□□ 2.4
STMN3-202ENST00000540534 FAM9AQ8IZU1 332 aaPredicted RBP30.01■■■□□ 2.39
STMN3-202ENST00000540534 PRDM2Q13029 1718 aa29.98■■■□□ 2.39
STMN3-202ENST00000540534 NESP48681 1621 aa29.98■■■□□ 2.39
STMN3-202ENST00000540534 LOC105371045A0A1W2PR82 267 aa29.95■■■□□ 2.38
STMN3-202ENST00000540534 TOP2BQ02880 1626 aa29.84■■■□□ 2.37
STMN3-202ENST00000540534 CUX1P39880 1505 aa29.83■■■□□ 2.37
STMN3-202ENST00000540534 PPARGC1BQ86YN6 1023 aaKnown RBP29.83■■■□□ 2.37
STMN3-202ENST00000540534 SOGA1O94964 1423 aa29.82■■■□□ 2.36
STMN3-202ENST00000540534 FANCD2Q9BXW9 1451 aa29.81■■■□□ 2.36
STMN3-202ENST00000540534 LAMC3Q9Y6N6 1575 aa29.8■■■□□ 2.36
STMN3-202ENST00000540534 BIVM-ERCC5R4GMW8 1640 aa29.79■■■□□ 2.36
STMN3-202ENST00000540534 RUSC2Q8N2Y8 1516 aa29.75■■■□□ 2.35
STMN3-202ENST00000540534 TRIM26Q12899 539 aaPredicted RBP29.67■■■□□ 2.34
STMN3-202ENST00000540534 EHMT2Q96KQ7 1210 aa29.67■■■□□ 2.34
STMN3-202ENST00000540534 PDS5BQ9NTI5 1447 aa29.59■■■□□ 2.33
STMN3-202ENST00000540534 CEP164Q9UPV0 1460 aa29.58■■■□□ 2.33
STMN3-202ENST00000540534 EEA1Q15075 1411 aa29.55■■■□□ 2.32
STMN3-202ENST00000540534 KIF21AQ7Z4S6 1674 aa29.54■■■□□ 2.32
STMN3-202ENST00000540534 CSRNP3Q8WYN3 585 aa29.53■■■□□ 2.32
STMN3-202ENST00000540534 FGD5Q6ZNL6 1462 aa29.49■■■□□ 2.31
STMN3-202ENST00000540534 DNMBPQ6XZF7 1577 aa29.49■■■□□ 2.31
STMN3-202ENST00000540534 TOPBP1Q92547 1522 aa29.48■■■□□ 2.31
STMN3-202ENST00000540534 URB2Q14146 1524 aaKnown RBP29.47■■■□□ 2.31
STMN3-202ENST00000540534 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
STMN3-202ENST00000540534 RAD54L2Q9Y4B4 1467 aa29.32■■■□□ 2.28
STMN3-202ENST00000540534 KIF27Q86VH2 1401 aa29.31■■■□□ 2.28
STMN3-202ENST00000540534 CUX2O14529 1486 aa29.3■■■□□ 2.28
STMN3-202ENST00000540534 ZEB1P37275 1124 aaPredicted RBP29.28■■■□□ 2.28
STMN3-202ENST00000540534 KIF21BO75037 1637 aa29.23■■■□□ 2.27
STMN3-202ENST00000540534 MRC2Q9UBG0 1479 aa29.23■■■□□ 2.27
STMN3-202ENST00000540534 GOLGA3Q08378 1498 aa29.22■■■□□ 2.27
STMN3-202ENST00000540534 RAPGEF2Q9Y4G8 1499 aa29.19■■■□□ 2.26
STMN3-202ENST00000540534 ABCA10Q8WWZ4 1543 aa29.18■■■□□ 2.26
STMN3-202ENST00000540534 UBTFP17480 764 aaKnown RBP29.17■■■□□ 2.26
STMN3-202ENST00000540534 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
STMN3-202ENST00000540534 PRXQ9BXM0 1461 aa29.15■■■□□ 2.26
STMN3-202ENST00000540534 TNIKQ9UKE5 1360 aa29.14■■■□□ 2.26
STMN3-202ENST00000540534 IGF1RP08069 1367 aa29.13■■■□□ 2.25
STMN3-202ENST00000540534 WDR97A6NE52 1622 aa29.09■■■□□ 2.25
STMN3-202ENST00000540534 WDR62O43379 1518 aa29.08■■■□□ 2.25
STMN3-202ENST00000540534 TARBP1Q13395 1621 aaKnown RBP29.04■■■□□ 2.24
STMN3-202ENST00000540534 TDRD9Q8NDG6 1382 aaKnown RBP29.03■■■□□ 2.24
STMN3-202ENST00000540534 CEP162Q5TB80 1403 aa29.03■■■□□ 2.24
STMN3-202ENST00000540534 ERICH3Q5RHP9 1530 aa29.03■■■□□ 2.24
STMN3-202ENST00000540534 THOC2Q8NI27 1593 aaKnown RBP29.03■■■□□ 2.24
STMN3-202ENST00000540534 ABCA5Q8WWZ7 1642 aa28.96■■■□□ 2.23
STMN3-202ENST00000540534 CARMIL1Q5VZK9 1371 aa28.95■■■□□ 2.23
STMN3-202ENST00000540534 GAPVD1Q14C86 1478 aa28.91■■■□□ 2.22
STMN3-202ENST00000540534 IFT140Q96RY7 1462 aa28.85■■■□□ 2.21
STMN3-202ENST00000540534 AQRO60306 1485 aaKnown RBP eCLIP28.85■■■□□ 2.21
STMN3-202ENST00000540534 ZNF608Q9ULD9 1512 aaPredicted RBP28.83■■■□□ 2.21
STMN3-202ENST00000540534 RANGAP1P46060 587 aaPredicted RBP28.83■■■□□ 2.21
STMN3-202ENST00000540534 CLIP1P30622 1438 aa28.79■■■□□ 2.2
STMN3-202ENST00000540534 CUL7Q14999 1698 aa28.79■■■□□ 2.2
STMN3-202ENST00000540534 PBRM1Q86U86 1689 aa28.73■■■□□ 2.19
STMN3-202ENST00000540534 EIF4G3O43432 1585 aaKnown RBP28.66■■■□□ 2.18
STMN3-202ENST00000540534 GRIN2BQ13224 1484 aa28.66■■■□□ 2.18
STMN3-202ENST00000540534 ADAMTS12P58397 1594 aa28.57■■■□□ 2.16
STMN3-202ENST00000540534 FHAD1B1AJZ9 1412 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms