RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 DCAF8L2P0C7V8 631 aa13.9□□□□□ -0.18
CTNND1-234ENST00000532844 NISCHQ9Y2I1 1504 aa13.45□□□□□ -0.26
CTNND1-234ENST00000532844 SUPT5HO00267 1087 aaKnown RBP13.33□□□□□ -0.27
CTNND1-234ENST00000532844 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
CTNND1-234ENST00000532844 SHROOM4Q9ULL8 1493 aa13.15□□□□□ -0.3
CTNND1-234ENST00000532844 EHMT2Q96KQ7 1210 aa12.92□□□□□ -0.34
CTNND1-234ENST00000532844 MYT1Q01538 1121 aa12.8□□□□□ -0.36
CTNND1-234ENST00000532844 ERICH6Q7L0X2 663 aa12.77□□□□□ -0.37
CTNND1-234ENST00000532844 FAM9AQ8IZU1 332 aaPredicted RBP12.67□□□□□ -0.38
CTNND1-234ENST00000532844 CCER1Q8TC90 406 aaPredicted RBP12.65□□□□□ -0.38
CTNND1-234ENST00000532844 APLP2Q06481 763 aa12.6□□□□□ -0.39
CTNND1-234ENST00000532844 PCGF6Q9BYE7 350 aa12.54□□□□□ -0.4
CTNND1-234ENST00000532844 TTBK1Q5TCY1 1321 aaPredicted RBP12.51□□□□□ -0.41
CTNND1-234ENST00000532844 CENPBP07199 599 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-234ENST00000532844 TRIM41Q8WV44 630 aa12.34□□□□□ -0.43
CTNND1-234ENST00000532844 RANGAP1P46060 587 aaPredicted RBP12.32□□□□□ -0.44
CTNND1-234ENST00000532844 ZEB1P37275 1124 aaPredicted RBP12.31□□□□□ -0.44
CTNND1-234ENST00000532844 YTHDC1Q96MU7 727 aaKnown RBP12.19□□□□□ -0.46
CTNND1-234ENST00000532844 ATP1B4Q9UN42 357 aaPredicted RBP12.17□□□□□ -0.46
CTNND1-234ENST00000532844 UBTFP17480 764 aaKnown RBP12.17□□□□□ -0.46
CTNND1-234ENST00000532844 NEFLP07196 543 aa12.15□□□□□ -0.46
CTNND1-234ENST00000532844 PPARGC1BQ86YN6 1023 aaKnown RBP12.06□□□□□ -0.48
CTNND1-234ENST00000532844 DAXXQ9UER7 740 aaPredicted RBP12.02□□□□□ -0.49
CTNND1-234ENST00000532844 TRIM26Q12899 539 aaPredicted RBP12.01□□□□□ -0.49
CTNND1-234ENST00000532844 MYT1LQ9UL68 1186 aa11.94□□□□□ -0.5
CTNND1-234ENST00000532844 HRCP23327 699 aa11.92□□□□□ -0.5
CTNND1-234ENST00000532844 LOC105371045A0A1W2PR82 267 aa11.88□□□□□ -0.51
CTNND1-234ENST00000532844 CHIC1Q5VXU3 224 aa11.86□□□□□ -0.51
CTNND1-234ENST00000532844 ITGAEP38570 1179 aa11.81□□□□□ -0.52
CTNND1-234ENST00000532844 RTL5Q5HYW3 569 aaPredicted RBP11.81□□□□□ -0.52
CTNND1-234ENST00000532844 HNRNPUL2Q1KMD3 747 aaKnown RBP11.76□□□□□ -0.53
CTNND1-234ENST00000532844 POLR3GLQ9BT43 218 aa11.71□□□□□ -0.54
CTNND1-234ENST00000532844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
CTNND1-234ENST00000532844 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
CTNND1-234ENST00000532844 CNGB1Q14028 1251 aaPredicted RBP11.61□□□□□ -0.55
CTNND1-234ENST00000532844 DIEXFQ68CQ4 756 aaKnown RBP11.6□□□□□ -0.55
CTNND1-234ENST00000532844 FAM50AQ14320 339 aaKnown RBP11.52□□□□□ -0.57
CTNND1-234ENST00000532844 SLC4A1APQ9BWU0 796 aaKnown RBP11.52□□□□□ -0.57
CTNND1-234ENST00000532844 CLSPNQ9HAW4 1339 aa11.5□□□□□ -0.57
CTNND1-234ENST00000532844 ABCC9O60706 1549 aa11.5□□□□□ -0.57
CTNND1-234ENST00000532844 GLIPR1L2Q4G1C9 344 aa11.48□□□□□ -0.57
CTNND1-234ENST00000532844 PABPN1Q86U42 306 aaKnown RBP eCLIP11.47□□□□□ -0.574e-7■□□□□ 8.4
CTNND1-234ENST00000532844 NEUROD1Q13562 356 aa11.45□□□□□ -0.58
CTNND1-234ENST00000532844 TRIM52Q96A61 297 aa11.44□□□□□ -0.58
CTNND1-234ENST00000532844 EIF5BO60841 1220 aaKnown RBP11.43□□□□□ -0.58
CTNND1-234ENST00000532844 GTF3C3Q9Y5Q9 886 aa11.39□□□□□ -0.59
CTNND1-234ENST00000532844 BCANQ96GW7 911 aa11.37□□□□□ -0.59
CTNND1-234ENST00000532844 ANP32CO43423 234 aa11.33□□□□□ -0.6
CTNND1-234ENST00000532844 ZNF326Q5BKZ1 582 aaKnown RBP11.3□□□□□ -0.6
CTNND1-234ENST00000532844 SLC24A1O60721 1099 aa11.25□□□□□ -0.61
CTNND1-234ENST00000532844 CDK11AQ9UQ88 783 aaPredicted RBP11.25□□□□□ -0.61
CTNND1-234ENST00000532844 CSRNP3Q8WYN3 585 aa11.24□□□□□ -0.61
CTNND1-234ENST00000532844 P3H3Q8IVL6 736 aa11.23□□□□□ -0.61
CTNND1-234ENST00000532844 ACIN1Q9UKV3 1341 aaKnown RBP11.22□□□□□ -0.61
CTNND1-234ENST00000532844 SCRIBQ14160 1630 aa11.22□□□□□ -0.61
CTNND1-234ENST00000532844 ANP32BQ92688 251 aaKnown RBP11.21□□□□□ -0.61
CTNND1-234ENST00000532844 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.61
CTNND1-234ENST00000532844 FBLN2P98095 1184 aa11.21□□□□□ -0.62
CTNND1-234ENST00000532844 ARID3CA6NKF2 412 aa11.18□□□□□ -0.62
CTNND1-234ENST00000532844 DCAF1Q9Y4B6 1507 aa11.16□□□□□ -0.62
CTNND1-234ENST00000532844 ZCCHC6Q5VYS8 1495 aaKnown RBP11.16□□□□□ -0.62
CTNND1-234ENST00000532844 ESF1Q9H501 851 aaKnown RBP11.14□□□□□ -0.63
CTNND1-234ENST00000532844 ANP32AP39687 249 aaKnown RBP11.13□□□□□ -0.63
CTNND1-234ENST00000532844 CANXP27824 592 aaKnown RBP11.13□□□□□ -0.63
CTNND1-234ENST00000532844 ZNF777Q9ULD5 760 aaPredicted RBP11.1□□□□□ -0.63
CTNND1-234ENST00000532844 PLPPR3Q6T4P5 718 aa11.1□□□□□ -0.63
CTNND1-234ENST00000532844 BCL11AQ9H165 835 aa11.07□□□□□ -0.64
CTNND1-234ENST00000532844 TONSLQ96HA7 1378 aa11.06□□□□□ -0.64
CTNND1-234ENST00000532844 FKBP8Q14318 412 aa11.04□□□□□ -0.64
CTNND1-234ENST00000532844 SCAF1Q9H7N4 1312 aaKnown RBP11.03□□□□□ -0.64
CTNND1-234ENST00000532844 NPM2Q86SE8 214 aaKnown RBP11.02□□□□□ -0.65
CTNND1-234ENST00000532844 NEFMP07197 916 aa11.02□□□□□ -0.65
CTNND1-234ENST00000532844 TNNT2P45379 298 aaPredicted RBP11.02□□□□□ -0.65
CTNND1-234ENST00000532844 CCDC180Q9P1Z9 1646 aa11.01□□□□□ -0.65
CTNND1-234ENST00000532844 DDX10Q13206 875 aaKnown RBP11□□□□□ -0.65
CTNND1-234ENST00000532844 HNRNPUQ00839 825 aaKnown RBP eCLIP10.99□□□□□ -0.65
CTNND1-234ENST00000532844 FAM9BQ8IZU0 186 aa10.97□□□□□ -0.65
CTNND1-234ENST00000532844 MYO15BQ96JP2 1530 aa10.96□□□□□ -0.66
CTNND1-234ENST00000532844 HSP90AA1P07900 732 aaKnown RBP10.95□□□□□ -0.66
CTNND1-234ENST00000532844 CHIC2Q9UKJ5 165 aa10.94□□□□□ -0.66
CTNND1-234ENST00000532844 A0A0G2JS52 829 aa10.94□□□□□ -0.66
CTNND1-234ENST00000532844 STAG3Q9UJ98 1225 aa10.93□□□□□ -0.66
CTNND1-234ENST00000532844 CHGAP10645 457 aaKnown RBP10.91□□□□□ -0.66
CTNND1-234ENST00000532844 SALL2Q9Y467 1007 aaPredicted RBP10.9□□□□□ -0.66
CTNND1-234ENST00000532844 CLIP1P30622 1438 aa10.9□□□□□ -0.66
CTNND1-234ENST00000532844 MIER1Q8N108 512 aa10.89□□□□□ -0.67
CTNND1-234ENST00000532844 CDK11BP21127 795 aaKnown RBP10.88□□□□□ -0.67
CTNND1-234ENST00000532844 NPM1P06748 294 aaKnown RBP eCLIP10.88□□□□□ -0.67
CTNND1-234ENST00000532844 UPF2Q9HAU5 1272 aaKnown RBP10.88□□□□□ -0.67
CTNND1-234ENST00000532844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.86□□□□□ -0.671e-8■■□□□ 13.5
CTNND1-234ENST00000532844 MTUS2Q5JR59 1369 aa10.86□□□□□ -0.67
CTNND1-234ENST00000532844 TMC1Q8TDI8 760 aa10.86□□□□□ -0.67
CTNND1-234ENST00000532844 CCDC136Q96JN2 1154 aa10.85□□□□□ -0.67
CTNND1-234ENST00000532844 HIRIP3Q9BW71 556 aaPredicted RBP10.85□□□□□ -0.67
CTNND1-234ENST00000532844 GOLGA3Q08378 1498 aa10.85□□□□□ -0.67
CTNND1-234ENST00000532844 MRS2Q9HD23 443 aa10.84□□□□□ -0.67
CTNND1-234ENST00000532844 CEP162Q5TB80 1403 aa10.84□□□□□ -0.67
CTNND1-234ENST00000532844 KDM2AQ9Y2K7 1162 aa10.83□□□□□ -0.68
CTNND1-234ENST00000532844 NBR1Q14596 966 aa10.83□□□□□ -0.68
CTNND1-234ENST00000532844 RSF1Q96T23 1441 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms