RNA–Protein interactions for RNA: ENST00000270776.12

PGD-201, Transcript of phosphogluconate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGD, Length 1,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGD-201ENST00000270776 NISCHQ9Y2I1 1504 aa32.97■■■□□ 2.87
PGD-201ENST00000270776 CCDC180Q9P1Z9 1646 aa29.1■■■□□ 2.25
PGD-201ENST00000270776 ABCC9O60706 1549 aa28.22■■■□□ 2.11
PGD-201ENST00000270776 ZCCHC6Q5VYS8 1495 aaKnown RBP27.54■■■□□ 2
PGD-201ENST00000270776 DCAF8L2P0C7V8 631 aa27.42■■□□□ 1.98
PGD-201ENST00000270776 NACADO15069 1562 aa27.31■■□□□ 1.96
PGD-201ENST00000270776 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
PGD-201ENST00000270776 MYO15BQ96JP2 1530 aa27.28■■□□□ 1.96
PGD-201ENST00000270776 RB1CC1Q8TDY2 1594 aa27.25■■□□□ 1.95
PGD-201ENST00000270776 UNC13AQ9UPW8 1703 aa26.63■■□□□ 1.85
PGD-201ENST00000270776 SCRIBQ14160 1630 aa26.61■■□□□ 1.85
PGD-201ENST00000270776 BICRAQ9NZM4 1560 aa26.46■■□□□ 1.83
PGD-201ENST00000270776 PABPN1Q86U42 306 aaKnown RBP eCLIP26.45■■□□□ 1.82
PGD-201ENST00000270776 SHROOM4Q9ULL8 1493 aa26.26■■□□□ 1.79
PGD-201ENST00000270776 EIF4G1Q04637 1599 aaKnown RBP25.72■■□□□ 1.71
PGD-201ENST00000270776 CECR2Q9BXF3 1484 aa25.68■■□□□ 1.7
PGD-201ENST00000270776 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
PGD-201ENST00000270776 CC2D2AQ9P2K1 1620 aa25.52■■□□□ 1.68
PGD-201ENST00000270776 BAZ1AQ9NRL2 1556 aaPredicted RBP25.51■■□□□ 1.68
PGD-201ENST00000270776 SMARCA4P51532 1647 aa25.49■■□□□ 1.67
PGD-201ENST00000270776 MROH2BQ7Z745 1585 aa25.43■■□□□ 1.66
PGD-201ENST00000270776 ATAD2BQ9ULI0 1458 aa25.3■■□□□ 1.64
PGD-201ENST00000270776 RSF1Q96T23 1441 aaPredicted RBP25.27■■□□□ 1.64
PGD-201ENST00000270776 PEG3Q9GZU2 1588 aa25.26■■□□□ 1.63
PGD-201ENST00000270776 SMARCA2P51531 1590 aa25.24■■□□□ 1.63
PGD-201ENST00000270776 NCAPD3P42695 1498 aa25.24■■□□□ 1.63
PGD-201ENST00000270776 WIZO95785 1651 aa25.15■■□□□ 1.62
PGD-201ENST00000270776 HMGXB3Q12766 1538 aa25.11■■□□□ 1.61
PGD-201ENST00000270776 BAZ1BQ9UIG0 1483 aaKnown RBP25.08■■□□□ 1.61
PGD-201ENST00000270776 TOP2AP11388 1531 aaKnown RBP24.89■■□□□ 1.58
PGD-201ENST00000270776 SUPT5HO00267 1087 aaKnown RBP24.87■■□□□ 1.57
PGD-201ENST00000270776 CCDC88BA6NC98 1476 aa24.63■■□□□ 1.53
PGD-201ENST00000270776 NESP48681 1621 aa24.53■■□□□ 1.52
PGD-201ENST00000270776 CADPSQ9ULU8 1353 aa24.52■■□□□ 1.52
PGD-201ENST00000270776 LAMC3Q9Y6N6 1575 aa24.49■■□□□ 1.51
PGD-201ENST00000270776 CFTRP13569 1480 aa24.45■■□□□ 1.5
PGD-201ENST00000270776 PDS5BQ9NTI5 1447 aa24.32■■□□□ 1.48
PGD-201ENST00000270776 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
PGD-201ENST00000270776 FANCD2Q9BXW9 1451 aa24.22■■□□□ 1.47
PGD-201ENST00000270776 KIF21AQ7Z4S6 1674 aa24.2■■□□□ 1.46
PGD-201ENST00000270776 PRDM2Q13029 1718 aa24.2■■□□□ 1.46
PGD-201ENST00000270776 CEP164Q9UPV0 1460 aa24.15■■□□□ 1.46
PGD-201ENST00000270776 THOC2Q8NI27 1593 aaKnown RBP24.05■■□□□ 1.44
PGD-201ENST00000270776 MRC2Q9UBG0 1479 aa24.04■■□□□ 1.44
PGD-201ENST00000270776 URB2Q14146 1524 aaKnown RBP23.97■■□□□ 1.43
PGD-201ENST00000270776 WDR62O43379 1518 aa23.96■■□□□ 1.43
PGD-201ENST00000270776 CUX2O14529 1486 aa23.89■■□□□ 1.41
PGD-201ENST00000270776 ABCC8Q09428 1581 aa23.87■■□□□ 1.41
PGD-201ENST00000270776 TOPBP1Q92547 1522 aa23.87■■□□□ 1.41
PGD-201ENST00000270776 DNMBPQ6XZF7 1577 aa23.85■■□□□ 1.41
PGD-201ENST00000270776 CUX1P39880 1505 aa23.82■■□□□ 1.4
PGD-201ENST00000270776 WRNQ14191 1432 aaPredicted RBP eCLIP23.8■■□□□ 1.4
PGD-201ENST00000270776 SYNJ1O43426 1573 aa23.71■■□□□ 1.39
PGD-201ENST00000270776 POLA1P09884 1462 aaPredicted RBP23.71■■□□□ 1.39
PGD-201ENST00000270776 TOP2BQ02880 1626 aa23.69■■□□□ 1.38
PGD-201ENST00000270776 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
PGD-201ENST00000270776 BIVM-ERCC5R4GMW8 1640 aa23.67■■□□□ 1.38
PGD-201ENST00000270776 IFT140Q96RY7 1462 aa23.63■■□□□ 1.37
PGD-201ENST00000270776 SOGA1O94964 1423 aa23.61■■□□□ 1.37
PGD-201ENST00000270776 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
PGD-201ENST00000270776 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
PGD-201ENST00000270776 ZNF608Q9ULD9 1512 aaPredicted RBP23.53■■□□□ 1.36
PGD-201ENST00000270776 ABCA10Q8WWZ4 1543 aa23.47■■□□□ 1.35
PGD-201ENST00000270776 TRIM41Q8WV44 630 aa23.47■■□□□ 1.35
PGD-201ENST00000270776 TDRD9Q8NDG6 1382 aaKnown RBP23.45■■□□□ 1.34
PGD-201ENST00000270776 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
PGD-201ENST00000270776 AQRO60306 1485 aaKnown RBP eCLIP23.44■■□□□ 1.342e-7■■■■■ 56.9
PGD-201ENST00000270776 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
PGD-201ENST00000270776 EIF4G3O43432 1585 aaKnown RBP23.41■■□□□ 1.34
PGD-201ENST00000270776 ABCA5Q8WWZ7 1642 aa23.34■■□□□ 1.33
PGD-201ENST00000270776 GAPVD1Q14C86 1478 aa23.34■■□□□ 1.33
PGD-201ENST00000270776 GRIN2BQ13224 1484 aa23.28■■□□□ 1.32
PGD-201ENST00000270776 KIF27Q86VH2 1401 aa23.27■■□□□ 1.32
PGD-201ENST00000270776 PBRM1Q86U86 1689 aa23.21■■□□□ 1.31
PGD-201ENST00000270776 SNAPC4Q5SXM2 1469 aa23.2■■□□□ 1.3
PGD-201ENST00000270776 RUSC2Q8N2Y8 1516 aa23.2■■□□□ 1.3
PGD-201ENST00000270776 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
PGD-201ENST00000270776 MAGI1Q96QZ7 1491 aaPredicted RBP23.18■■□□□ 1.3
PGD-201ENST00000270776 IGF1RP08069 1367 aa23.17■■□□□ 1.3
PGD-201ENST00000270776 SYNJ2O15056 1496 aa23.09■■□□□ 1.29
PGD-201ENST00000270776 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.28
PGD-201ENST00000270776 ADAMTS12P58397 1594 aa23.08■■□□□ 1.28
PGD-201ENST00000270776 FBLN2P98095 1184 aa23.07■■□□□ 1.28
PGD-201ENST00000270776 CHMP7Q8WUX9 453 aaPredicted RBP23.07■■□□□ 1.28
PGD-201ENST00000270776 EEA1Q15075 1411 aa23.03■■□□□ 1.28
PGD-201ENST00000270776 CHD1O14646 1710 aa23.02■■□□□ 1.28
PGD-201ENST00000270776 CUL7Q14999 1698 aa23.01■■□□□ 1.27
PGD-201ENST00000270776 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
PGD-201ENST00000270776 OSCARQ8IYS5 282 aa22.99■■□□□ 1.27
PGD-201ENST00000270776 CSRNP3Q8WYN3 585 aa22.99■■□□□ 1.27
PGD-201ENST00000270776 GRIN2AQ12879 1464 aa22.99■■□□□ 1.27
PGD-201ENST00000270776 FAM9AQ8IZU1 332 aaPredicted RBP22.98■■□□□ 1.27
PGD-201ENST00000270776 PRXQ9BXM0 1461 aa22.93■■□□□ 1.26
PGD-201ENST00000270776 RAPGEF2Q9Y4G8 1499 aa22.9■■□□□ 1.26
PGD-201ENST00000270776 NUP160Q12769 1436 aa22.88■■□□□ 1.25
PGD-201ENST00000270776 CEP170Q5SW79 1584 aa22.86■■□□□ 1.25
PGD-201ENST00000270776 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
PGD-201ENST00000270776 DNAJC5Q9H3Z4 198 aa22.81■■□□□ 1.24
PGD-201ENST00000270776 KIF21BO75037 1637 aa22.76■■□□□ 1.23
PGD-201ENST00000270776 KIAA0586Q9BVV6 1533 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms