RNA–Protein interactions for RNA: ENST00000437826.6

CLPB-203, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 3,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-203ENST00000437826 NISCHQ9Y2I1 1504 aa23.92■■□□□ 1.42
CLPB-203ENST00000437826 DCAF8L2P0C7V8 631 aa20.47■□□□□ 0.87
CLPB-203ENST00000437826 CCDC180Q9P1Z9 1646 aa20.46■□□□□ 0.87
CLPB-203ENST00000437826 SHROOM4Q9ULL8 1493 aa20.36■□□□□ 0.85
CLPB-203ENST00000437826 ZCCHC6Q5VYS8 1495 aaKnown RBP20.08■□□□□ 0.8
CLPB-203ENST00000437826 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
CLPB-203ENST00000437826 ABCC9O60706 1549 aa19.73■□□□□ 0.75
CLPB-203ENST00000437826 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
CLPB-203ENST00000437826 PPARGC1BQ86YN6 1023 aaKnown RBP19.42■□□□□ 0.7
CLPB-203ENST00000437826 PCGF6Q9BYE7 350 aa19.38■□□□□ 0.69
CLPB-203ENST00000437826 SCRIBQ14160 1630 aa19.33■□□□□ 0.68
CLPB-203ENST00000437826 NACADO15069 1562 aa19.11■□□□□ 0.65
CLPB-203ENST00000437826 HRCP23327 699 aa19.1■□□□□ 0.65
CLPB-203ENST00000437826 MYO15BQ96JP2 1530 aa19.08■□□□□ 0.64
CLPB-203ENST00000437826 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
CLPB-203ENST00000437826 EHMT2Q96KQ7 1210 aa18.97■□□□□ 0.63
CLPB-203ENST00000437826 PABPN1Q86U42 306 aaKnown RBP eCLIP18.86■□□□□ 0.61
CLPB-203ENST00000437826 LOC105371045A0A1W2PR82 267 aa18.79■□□□□ 0.6
CLPB-203ENST00000437826 CECR2Q9BXF3 1484 aa18.79■□□□□ 0.6
CLPB-203ENST00000437826 RSF1Q96T23 1441 aaPredicted RBP18.77■□□□□ 0.6
CLPB-203ENST00000437826 CHIC1Q5VXU3 224 aa18.74■□□□□ 0.59
CLPB-203ENST00000437826 MROH2BQ7Z745 1585 aa18.62■□□□□ 0.57
CLPB-203ENST00000437826 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
CLPB-203ENST00000437826 FAM9AQ8IZU1 332 aaPredicted RBP18.51■□□□□ 0.55
CLPB-203ENST00000437826 WIZO95785 1651 aa18.5■□□□□ 0.55
CLPB-203ENST00000437826 BICRAQ9NZM4 1560 aa18.42■□□□□ 0.54
CLPB-203ENST00000437826 BAZ1AQ9NRL2 1556 aaPredicted RBP18.41■□□□□ 0.54
CLPB-203ENST00000437826 TTBK1Q5TCY1 1321 aaPredicted RBP18.37■□□□□ 0.53
CLPB-203ENST00000437826 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
CLPB-203ENST00000437826 SMARCA4P51532 1647 aa18.32■□□□□ 0.52
CLPB-203ENST00000437826 SCAF1Q9H7N4 1312 aaKnown RBP18.26■□□□□ 0.51
CLPB-203ENST00000437826 TRIM26Q12899 539 aaPredicted RBP18.17■□□□□ 0.5
CLPB-203ENST00000437826 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
CLPB-203ENST00000437826 CCDC88BA6NC98 1476 aa18.13■□□□□ 0.49
CLPB-203ENST00000437826 SMARCA2P51531 1590 aa18.03■□□□□ 0.48
CLPB-203ENST00000437826 YTHDC1Q96MU7 727 aaKnown RBP18.03■□□□□ 0.48
CLPB-203ENST00000437826 ATAD2BQ9ULI0 1458 aa18.02■□□□□ 0.48
CLPB-203ENST00000437826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
CLPB-203ENST00000437826 BAZ1BQ9UIG0 1483 aaKnown RBP18■□□□□ 0.47
CLPB-203ENST00000437826 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
CLPB-203ENST00000437826 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
CLPB-203ENST00000437826 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
CLPB-203ENST00000437826 NEUROD1Q13562 356 aa17.9■□□□□ 0.46
CLPB-203ENST00000437826 GTF3C3Q9Y5Q9 886 aa17.9■□□□□ 0.46
CLPB-203ENST00000437826 CCER1Q8TC90 406 aaPredicted RBP17.89■□□□□ 0.45
CLPB-203ENST00000437826 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
CLPB-203ENST00000437826 ZEB1P37275 1124 aaPredicted RBP17.77■□□□□ 0.44
CLPB-203ENST00000437826 NCAPD3P42695 1498 aa17.71■□□□□ 0.43
CLPB-203ENST00000437826 ACIN1Q9UKV3 1341 aaKnown RBP17.71■□□□□ 0.43
CLPB-203ENST00000437826 SOGA1O94964 1423 aa17.7■□□□□ 0.42
CLPB-203ENST00000437826 WRNQ14191 1432 aaPredicted RBP eCLIP17.7■□□□□ 0.42
CLPB-203ENST00000437826 DIEXFQ68CQ4 756 aaKnown RBP17.65■□□□□ 0.42
CLPB-203ENST00000437826 RUSC2Q8N2Y8 1516 aa17.64■□□□□ 0.41
CLPB-203ENST00000437826 CC2D2AQ9P2K1 1620 aa17.63■□□□□ 0.41
CLPB-203ENST00000437826 UBTFP17480 764 aaKnown RBP17.62■□□□□ 0.41
CLPB-203ENST00000437826 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
CLPB-203ENST00000437826 CENPBP07199 599 aaPredicted RBP17.6■□□□□ 0.41
CLPB-203ENST00000437826 RANGAP1P46060 587 aaPredicted RBP17.59■□□□□ 0.41
CLPB-203ENST00000437826 CSRNP3Q8WYN3 585 aa17.59■□□□□ 0.41
CLPB-203ENST00000437826 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
CLPB-203ENST00000437826 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.39
CLPB-203ENST00000437826 CFTRP13569 1480 aa17.44■□□□□ 0.38
CLPB-203ENST00000437826 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
CLPB-203ENST00000437826 NESP48681 1621 aa17.37■□□□□ 0.37
CLPB-203ENST00000437826 EEA1Q15075 1411 aa17.37■□□□□ 0.37
CLPB-203ENST00000437826 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
CLPB-203ENST00000437826 CUX1P39880 1505 aa17.36■□□□□ 0.37
CLPB-203ENST00000437826 TOP2BQ02880 1626 aa17.34■□□□□ 0.37
CLPB-203ENST00000437826 CEP162Q5TB80 1403 aa17.34■□□□□ 0.37
CLPB-203ENST00000437826 GOLGA3Q08378 1498 aa17.31■□□□□ 0.36
CLPB-203ENST00000437826 TNIKQ9UKE5 1360 aa17.29■□□□□ 0.36
CLPB-203ENST00000437826 FANCD2Q9BXW9 1451 aa17.27■□□□□ 0.35
CLPB-203ENST00000437826 RAPGEF2Q9Y4G8 1499 aa17.26■□□□□ 0.35
CLPB-203ENST00000437826 CEP164Q9UPV0 1460 aa17.26■□□□□ 0.35
CLPB-203ENST00000437826 MIER1Q8N108 512 aa17.25■□□□□ 0.35
CLPB-203ENST00000437826 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
CLPB-203ENST00000437826 KIF27Q86VH2 1401 aa17.2■□□□□ 0.34
CLPB-203ENST00000437826 BCANQ96GW7 911 aa17.2■□□□□ 0.34
CLPB-203ENST00000437826 CUX2O14529 1486 aa17.2■□□□□ 0.34
CLPB-203ENST00000437826 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
CLPB-203ENST00000437826 CLIP1P30622 1438 aa17.15■□□□□ 0.34
CLPB-203ENST00000437826 RAD54L2Q9Y4B4 1467 aa17.13■□□□□ 0.33
CLPB-203ENST00000437826 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
CLPB-203ENST00000437826 KIF21BO75037 1637 aa17.13■□□□□ 0.33
CLPB-203ENST00000437826 ZNF316A6NFI3 1004 aaPredicted RBP17.12■□□□□ 0.33
CLPB-203ENST00000437826 APLP2Q06481 763 aa17.1■□□□□ 0.33
CLPB-203ENST00000437826 MYT1Q01538 1121 aa17.08■□□□□ 0.32
CLPB-203ENST00000437826 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
CLPB-203ENST00000437826 IGF1RP08069 1367 aa17.05■□□□□ 0.32
CLPB-203ENST00000437826 PDS5BQ9NTI5 1447 aa17.05■□□□□ 0.32
CLPB-203ENST00000437826 PRXQ9BXM0 1461 aa17.05■□□□□ 0.32
CLPB-203ENST00000437826 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
CLPB-203ENST00000437826 P3H3Q8IVL6 736 aa17.03■□□□□ 0.32
CLPB-203ENST00000437826 POLA1P09884 1462 aaPredicted RBP17.03■□□□□ 0.32
CLPB-203ENST00000437826 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.32
CLPB-203ENST00000437826 CARMIL1Q5VZK9 1371 aa17.02■□□□□ 0.31
CLPB-203ENST00000437826 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
CLPB-203ENST00000437826 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
CLPB-203ENST00000437826 ATP1B4Q9UN42 357 aaPredicted RBP16.99■□□□□ 0.31
CLPB-203ENST00000437826 ITGAEP38570 1179 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms