RNA–Protein interactions for RNA: ENST00000402541.5

HS1BP3-202, Transcript of HCLS1 binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene HS1BP3, Length 4,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3-202ENST00000402541 NISCHQ9Y2I1 1504 aa21.62■■□□□ 1.05
HS1BP3-202ENST00000402541 DCAF8L2P0C7V8 631 aa20.22■□□□□ 0.83
HS1BP3-202ENST00000402541 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
HS1BP3-202ENST00000402541 SHROOM4Q9ULL8 1493 aa18.79■□□□□ 0.6
HS1BP3-202ENST00000402541 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
HS1BP3-202ENST00000402541 EHMT2Q96KQ7 1210 aa18.55■□□□□ 0.56
HS1BP3-202ENST00000402541 ABCC9O60706 1549 aa18.49■□□□□ 0.55
HS1BP3-202ENST00000402541 FAM9AQ8IZU1 332 aaPredicted RBP18.02■□□□□ 0.48
HS1BP3-202ENST00000402541 ZCCHC6Q5VYS8 1495 aaKnown RBP18.02■□□□□ 0.47
HS1BP3-202ENST00000402541 APLP2Q06481 763 aa17.96■□□□□ 0.47
HS1BP3-202ENST00000402541 TTBK1Q5TCY1 1321 aaPredicted RBP17.87■□□□□ 0.45
HS1BP3-202ENST00000402541 RANGAP1P46060 587 aaPredicted RBP17.73■□□□□ 0.43
HS1BP3-202ENST00000402541 PELP1Q8IZL8 1130 aaKnown RBP17.72■□□□□ 0.43
HS1BP3-202ENST00000402541 NACADO15069 1562 aa17.72■□□□□ 0.43
HS1BP3-202ENST00000402541 RB1CC1Q8TDY2 1594 aa17.72■□□□□ 0.43
HS1BP3-202ENST00000402541 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
HS1BP3-202ENST00000402541 PCGF6Q9BYE7 350 aa17.63■□□□□ 0.41
HS1BP3-202ENST00000402541 PABPN1Q86U42 306 aaKnown RBP eCLIP17.59■□□□□ 0.41
HS1BP3-202ENST00000402541 SCRIBQ14160 1630 aa17.54■□□□□ 0.4
HS1BP3-202ENST00000402541 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
HS1BP3-202ENST00000402541 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.4
HS1BP3-202ENST00000402541 ATP1B4Q9UN42 357 aaPredicted RBP17.52■□□□□ 0.4
HS1BP3-202ENST00000402541 MYT1Q01538 1121 aa17.43■□□□□ 0.38
HS1BP3-202ENST00000402541 UBTFP17480 764 aaKnown RBP17.39■□□□□ 0.37
HS1BP3-202ENST00000402541 CCER1Q8TC90 406 aaPredicted RBP17.31■□□□□ 0.36
HS1BP3-202ENST00000402541 PPARGC1BQ86YN6 1023 aaKnown RBP17.18■□□□□ 0.34
HS1BP3-202ENST00000402541 CENPBP07199 599 aaPredicted RBP17.06■□□□□ 0.32
HS1BP3-202ENST00000402541 ZEB1P37275 1124 aaPredicted RBP17.06■□□□□ 0.32
HS1BP3-202ENST00000402541 CHIC1Q5VXU3 224 aa16.95■□□□□ 0.3
HS1BP3-202ENST00000402541 YTHDC1Q96MU7 727 aaKnown RBP16.93■□□□□ 0.3
HS1BP3-202ENST00000402541 ITGAEP38570 1179 aa16.92■□□□□ 0.3
HS1BP3-202ENST00000402541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
HS1BP3-202ENST00000402541 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
HS1BP3-202ENST00000402541 LOC105371045A0A1W2PR82 267 aa16.89■□□□□ 0.29
HS1BP3-202ENST00000402541 CECR2Q9BXF3 1484 aa16.88■□□□□ 0.29
HS1BP3-202ENST00000402541 ERICH6Q7L0X2 663 aa16.88■□□□□ 0.29
HS1BP3-202ENST00000402541 MYT1LQ9UL68 1186 aa16.86■□□□□ 0.29
HS1BP3-202ENST00000402541 UNC13AQ9UPW8 1703 aa16.85■□□□□ 0.29
HS1BP3-202ENST00000402541 BICRAQ9NZM4 1560 aa16.83■□□□□ 0.29
HS1BP3-202ENST00000402541 BAZ1AQ9NRL2 1556 aaPredicted RBP16.8■□□□□ 0.28
HS1BP3-202ENST00000402541 NEFLP07196 543 aa16.8■□□□□ 0.28
HS1BP3-202ENST00000402541 RSF1Q96T23 1441 aaPredicted RBP16.77■□□□□ 0.27
HS1BP3-202ENST00000402541 POLR3GLQ9BT43 218 aa16.74■□□□□ 0.27
HS1BP3-202ENST00000402541 TRIM26Q12899 539 aaPredicted RBP16.73■□□□□ 0.27
HS1BP3-202ENST00000402541 HRCP23327 699 aa16.71■□□□□ 0.27
HS1BP3-202ENST00000402541 MROH2BQ7Z745 1585 aa16.7■□□□□ 0.26
HS1BP3-202ENST00000402541 CNGB1Q14028 1251 aaPredicted RBP16.68■□□□□ 0.26
HS1BP3-202ENST00000402541 SMARCA4P51532 1647 aa16.61■□□□□ 0.25
HS1BP3-202ENST00000402541 BAZ1BQ9UIG0 1483 aaKnown RBP16.6■□□□□ 0.25
HS1BP3-202ENST00000402541 EIF4G1Q04637 1599 aaKnown RBP16.59■□□□□ 0.25
HS1BP3-202ENST00000402541 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
HS1BP3-202ENST00000402541 ATAD2BQ9ULI0 1458 aa16.52■□□□□ 0.24
HS1BP3-202ENST00000402541 WIZO95785 1651 aa16.5■□□□□ 0.23
HS1BP3-202ENST00000402541 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
HS1BP3-202ENST00000402541 CC2D2AQ9P2K1 1620 aa16.42■□□□□ 0.22
HS1BP3-202ENST00000402541 FAM50AQ14320 339 aaKnown RBP16.39■□□□□ 0.21
HS1BP3-202ENST00000402541 NCAPD3P42695 1498 aa16.37■□□□□ 0.21
HS1BP3-202ENST00000402541 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
HS1BP3-202ENST00000402541 TOP2AP11388 1531 aaKnown RBP16.36■□□□□ 0.21
HS1BP3-202ENST00000402541 FBLN2P98095 1184 aa16.31■□□□□ 0.2
HS1BP3-202ENST00000402541 TRIM52Q96A61 297 aa16.3■□□□□ 0.2
HS1BP3-202ENST00000402541 DAXXQ9UER7 740 aaPredicted RBP16.29■□□□□ 0.2
HS1BP3-202ENST00000402541 CCDC88BA6NC98 1476 aa16.28■□□□□ 0.2
HS1BP3-202ENST00000402541 NEUROD1Q13562 356 aa16.24■□□□□ 0.19
HS1BP3-202ENST00000402541 HMGXB3Q12766 1538 aa16.23■□□□□ 0.19
HS1BP3-202ENST00000402541 PEG3Q9GZU2 1588 aa16.2■□□□□ 0.18
HS1BP3-202ENST00000402541 ZNF326Q5BKZ1 582 aaKnown RBP16.18■□□□□ 0.18
HS1BP3-202ENST00000402541 DIEXFQ68CQ4 756 aaKnown RBP16.18■□□□□ 0.18
HS1BP3-202ENST00000402541 ARID3CA6NKF2 412 aa16.15■□□□□ 0.18
HS1BP3-202ENST00000402541 CSRNP3Q8WYN3 585 aa16.15■□□□□ 0.18
HS1BP3-202ENST00000402541 CADPSQ9ULU8 1353 aa16.14■□□□□ 0.17
HS1BP3-202ENST00000402541 P3H3Q8IVL6 736 aa16.13■□□□□ 0.17
HS1BP3-202ENST00000402541 CLSPNQ9HAW4 1339 aa16.11■□□□□ 0.17
HS1BP3-202ENST00000402541 ERCC6Q03468 1493 aa16.08■□□□□ 0.17
HS1BP3-202ENST00000402541 SCAF1Q9H7N4 1312 aaKnown RBP16.08■□□□□ 0.17
HS1BP3-202ENST00000402541 PDS5BQ9NTI5 1447 aa16.06■□□□□ 0.16
HS1BP3-202ENST00000402541 WRNQ14191 1432 aaPredicted RBP eCLIP15.99■□□□□ 0.15
HS1BP3-202ENST00000402541 NESP48681 1621 aa15.97■□□□□ 0.15
HS1BP3-202ENST00000402541 GTF3C3Q9Y5Q9 886 aa15.96■□□□□ 0.15
HS1BP3-202ENST00000402541 ZNF777Q9ULD5 760 aaPredicted RBP15.95■□□□□ 0.14
HS1BP3-202ENST00000402541 CFTRP13569 1480 aa15.95■□□□□ 0.14
HS1BP3-202ENST00000402541 BCANQ96GW7 911 aa15.94■□□□□ 0.14
HS1BP3-202ENST00000402541 FANCD2Q9BXW9 1451 aa15.94■□□□□ 0.14
HS1BP3-202ENST00000402541 CEP164Q9UPV0 1460 aa15.92■□□□□ 0.14
HS1BP3-202ENST00000402541 ANP32CO43423 234 aa15.91■□□□□ 0.14
HS1BP3-202ENST00000402541 BCL11AQ9H165 835 aa15.89■□□□□ 0.14
HS1BP3-202ENST00000402541 ABCC8Q09428 1581 aa15.89■□□□□ 0.13
HS1BP3-202ENST00000402541 ZNF316A6NFI3 1004 aaPredicted RBP15.89■□□□□ 0.13
HS1BP3-202ENST00000402541 SLC24A1O60721 1099 aa15.88■□□□□ 0.13
HS1BP3-202ENST00000402541 LAMC3Q9Y6N6 1575 aa15.84■□□□□ 0.13
HS1BP3-202ENST00000402541 RTL5Q5HYW3 569 aaPredicted RBP15.83■□□□□ 0.12
HS1BP3-202ENST00000402541 CDK11AQ9UQ88 783 aaPredicted RBP15.79■□□□□ 0.12
HS1BP3-202ENST00000402541 ZBTB47Q9UFB7 747 aaPredicted RBP15.77■□□□□ 0.11
HS1BP3-202ENST00000402541 ACIN1Q9UKV3 1341 aaKnown RBP15.76■□□□□ 0.11
HS1BP3-202ENST00000402541 PLPPR3Q6T4P5 718 aa15.75■□□□□ 0.11
HS1BP3-202ENST00000402541 CHGAP10645 457 aaKnown RBP15.74■□□□□ 0.11
HS1BP3-202ENST00000402541 SOGA1O94964 1423 aa15.72■□□□□ 0.11
HS1BP3-202ENST00000402541 NEFMP07197 916 aa15.72■□□□□ 0.11
HS1BP3-202ENST00000402541 CANXP27824 592 aaKnown RBP15.72■□□□□ 0.11
HS1BP3-202ENST00000402541 ESF1Q9H501 851 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms